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CAKLQF020000025.1__CAH1092175.1__SAMEA5780031_03514__00051
Bact-VirCAKLQF020000025.1__CAH1092175.1__SAMEA5780031_03514__00051
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 52-157
Domain cluster:
rep: CAKLQF020000016.1__CAH1088172.1__SAMEA5780031_02853__00075__D35-128
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04170.19 best | NlpE | 96.9 | 1.30e-27 | 82.1% | 98.8% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.97 | 89.0 | 8.96e-01 | 100.0% | 94.4% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.84 | 60.0 | 6.92e-01 | 76.4% | 100.0% |
| 3ebkB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.69 | 64.0 | 5.46e-01 | 100.0% | 65.2% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.67 | 58.0 | 5.02e-01 | 96.2% | 86.1% |
| 3ebwA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.66 | 60.0 | 5.43e-01 | 99.1% | 73.9% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.66 | 54.0 | 5.66e-01 | 97.2% | 97.9% |
| 2kt4B01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.65 | 56.0 | 5.13e-01 | 94.3% | 78.2% |
| 7knlA01 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.65 | 50.0 | 4.96e-01 | 83.0% | 83.3% |
| 3ia8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.64 | 58.0 | 5.06e-01 | 100.0% | 94.4% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.64 | 43.0 | 4.34e-01 | 100.0% | 68.5% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.63 | 47.0 | 5.05e-01 | 93.4% | 94.3% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 45.0 | 4.01e-01 | 88.7% | 79.7% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 36.0 | 4.09e-01 | 85.8% | 94.7% |
| 1eurA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.54 | 45.0 | 3.19e-01 | 92.5% | 81.4% |
| 4qa8A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.54 | 47.0 | 3.86e-01 | 100.0% | 92.4% |
| 8gzhC01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.54 | 41.0 | 3.35e-01 | 79.2% | 98.3% |
| 3flpA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 43.0 | 3.47e-01 | 90.6% | 74.2% |
| 3dukA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 41.0 | 3.91e-01 | 84.0% | 92.8% |
| 3blzA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 41.0 | 3.90e-01 | 84.0% | 91.9% |
| 5c0pA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 42.0 | 3.15e-01 | 87.7% | 50.0% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 31.0 | 3.67e-01 | 90.6% | 91.3% |
| 5hp6A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 41.0 | 2.98e-01 | 88.7% | 81.5% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.51 | 43.0 | 3.86e-01 | 93.4% | 81.2% |
| 2ldkA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 44.0 | 3.82e-01 | 97.2% | 78.5% |
| 5jowA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 3.62e-01 | 96.2% | 70.5% |
| 1ms9A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.51 | 41.0 | 2.88e-01 | 88.7% | 61.2% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 138255 | 9.1.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › NlpE | 0.97 | 89.0 | 8.92e-01 | 100.0% | 93.5% |
| 3945059 | 9.1.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › NlpE | 0.87 | 79.0 | 7.94e-01 | 97.2% | 95.2% |
| 3407007 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.72 | 64.0 | 5.41e-01 | 96.2% | 86.5% |
| 3691111 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.72 | 63.0 | 5.35e-01 | 96.2% | 89.0% |
| 4577518 | 9.1.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › His_binding | 0.69 | 62.0 | 5.22e-01 | 100.0% | 70.0% |
| 3474038 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.67 | 61.0 | 5.58e-01 | 100.0% | 97.1% |
| 842 | 9.1.1.11 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 | 0.67 | 58.0 | 5.02e-01 | 96.2% | 85.0% |
| 3702663 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.64 | 38.0 | 3.45e-01 | 76.4% | 43.4% |
| 4875038 | 9.1.1.11 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 | 0.63 | 56.0 | 5.01e-01 | 100.0% | 80.0% |
| 5081501 | 4252.1.1.1 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › CrtC | 0.62 | 55.0 | 4.68e-01 | 100.0% | 89.7% |
| 3266788 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.61 | 42.0 | 4.03e-01 | 93.4% | 61.3% |
| 4258908 | 4998.1.1.1 ↗ | beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 | 0.61 | 47.0 | 4.36e-01 | 84.0% | 87.9% |
| 3238631 | 2484.1.1.190 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 | 0.60 | 42.0 | 3.17e-01 | 92.5% | 29.2% |
| 4629131 | 9.29.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › VirK › VirK › VirK | 0.60 | 43.0 | 4.14e-01 | 75.5% | 96.7% |
| 3266626 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.58 | 48.0 | 4.95e-01 | 97.2% | 94.9% |
| 3265309 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.58 | 47.0 | 4.22e-01 | 94.3% | 63.2% |
| 3970343 | 5084.5.1.24 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Gcw_chp | 0.57 | 47.0 | 3.75e-01 | 90.6% | 96.7% |
| 3694574 | 5.1.4.31 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C | 0.57 | 48.0 | 3.15e-01 | 94.3% | 82.4% |
| 3370313 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.56 | 41.0 | 3.58e-01 | 76.4% | 65.5% |
| 3725709 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 43.0 | 4.25e-01 | 89.6% | 78.2% |
| 3261845 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 45.0 | 3.10e-01 | 87.7% | 33.2% |
| 4014366 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 46.0 | 3.22e-01 | 92.5% | 73.6% |
| 3455400 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.55 | 45.0 | 3.24e-01 | 88.7% | 70.8% |
| 3740661 | 5.1.4.119 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C | 0.55 | 44.0 | 3.01e-01 | 87.7% | 43.4% |
| 3596898 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 42.0 | 3.13e-01 | 84.0% | 90.7% |
| 3716903 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.54 | 44.0 | 3.08e-01 | 87.7% | 72.8% |
| 3573723 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.54 | 43.0 | 2.81e-01 | 85.8% | 62.7% |
| 4673651 | 5.1.4.51 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR_4 | 0.54 | 45.0 | 3.03e-01 | 94.3% | 86.3% |
| 3286246 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 42.0 | 4.30e-01 | 86.8% | 86.5% |
| 4030047 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 43.0 | 2.99e-01 | 87.7% | 37.2% |
| 420412 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.53 | 43.0 | 4.03e-01 | 89.6% | 81.5% |
| 3743943 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 41.0 | 2.79e-01 | 85.8% | 52.4% |
| 3505083 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 42.0 | 3.00e-01 | 88.7% | 63.1% |
| 4941519 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 43.0 | 2.92e-01 | 89.6% | 84.7% |
| 5049182 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.52 | 41.0 | 3.23e-01 | 85.8% | 78.3% |
| 4878713 | 331.3.1.42 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Mtb12_C | 0.52 | 40.0 | 4.12e-01 | 82.1% | 100.0% |
| 3584039 | 5.1.5.89 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF31099 | 0.52 | 42.0 | 2.90e-01 | 88.7% | 58.0% |
| 3917795 | 5.1.4.173 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_2nd | 0.51 | 41.0 | 2.91e-01 | 87.7% | 68.2% |
| 3685544 | 5.1.5.77 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_WDR75_1st | 0.50 | 39.0 | 2.86e-01 | 86.8% | 49.4% |