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CAKLQF020000025.1__CAH1092177.1__SAMEA5780031_03515__00052
Bact-VirCAKLQF020000025.1__CAH1092177.1__SAMEA5780031_03515__00052
Identity
- Kingdom:
- phage
Quality
95.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 281-323
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 44.0 | 3.50e-01 | 72.1% | 52.7% |
| 3a32A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.63 | 45.0 | 2.72e-01 | 79.1% | 26.5% |
| 2zkzC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 42.0 | 3.46e-01 | 76.7% | 57.5% |
| 1fbnA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 43.0 | 4.17e-01 | 83.7% | 98.0% |
| 4rz0A00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.57 | 46.0 | 3.53e-01 | 100.0% | 36.8% |
| 2q7bA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 40.0 | 2.79e-01 | 86.0% | 40.9% |
| 3kmaA00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.52 | 41.0 | 3.28e-01 | 100.0% | 40.0% |
| 1x0gA00 | 2.60.300.12 | Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain | 0.52 | 40.0 | 3.16e-01 | 90.7% | 62.7% |
| 1ewqA04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.51 | 37.0 | 2.87e-01 | 93.0% | 30.9% |
| 2oo4A02 | 3.30.70.3310 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 36.0 | 2.78e-01 | 76.7% | 60.4% |
| 3fzvD02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 37.0 | 2.91e-01 | 83.7% | 47.7% |
| 1jidA00 | 3.30.56.30 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Signal recognition particle, SRP19-like subunit | 0.51 | 37.0 | 2.94e-01 | 90.7% | 71.1% |
| 3c9aA01 | 2.20.20.160 | Mainly Beta › Single Sheet › Anthopleurin-A › | 0.50 | 37.0 | 3.21e-01 | 83.7% | 72.4% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965904 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.97 | 91.0 | 4.99e-01 | 100.0% | 8.1% |
| 4547012 | 2002.1.1.22 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ICL | 0.89 | 81.0 | 4.48e-01 | 100.0% | 8.3% |
| 3711775 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 44.0 | 3.57e-01 | 74.4% | 78.9% |
| 3255136 | 511.1.1.0 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain | 0.61 | 44.0 | 3.19e-01 | 79.1% | 58.6% |
| 3333725 | 2485.1.1.40 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N_3 | 0.60 | 51.0 | 3.52e-01 | 97.7% | 48.1% |
| 5025132 | 2003.1.5.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Fibrillarin | 0.59 | 48.0 | 3.16e-01 | 100.0% | 26.7% |
| 3937710 | 633.23.1.4 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 | 0.59 | 42.0 | 2.67e-01 | 79.1% | 30.4% |
| 4627913 | 101.1.2.90 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9 | 0.59 | 40.0 | 3.23e-01 | 74.4% | 65.3% |
| 154009 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.55 | 38.0 | 2.97e-01 | 72.1% | 67.7% |
| 3916783 | 304.27.1.0 ↗ | a+b two layers › Alpha-beta plaits › Formiminotransferase domain of formiminotransferase-cyclodeaminase. › Formiminotransferase domain of formiminotransferase-cyclodeaminase. | 0.55 | 42.0 | 3.16e-01 | 86.0% | 91.7% |
| 4154855 | 4205.1.1.1 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › Syd | 0.54 | 36.0 | 2.53e-01 | 76.7% | 17.8% |
| 3754596 | 314.1.1.1 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2 | 0.53 | 38.0 | 2.44e-01 | 88.4% | 73.7% |
| 3595213 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.53 | 39.0 | 2.98e-01 | 88.4% | 54.4% |
| 3904509 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.52 | 38.0 | 3.24e-01 | 83.7% | 57.6% |
| 4949515 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.50 | 39.0 | 3.35e-01 | 95.3% | 80.0% |
| 5078772 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.50 | 37.0 | 3.35e-01 | 83.7% | 100.0% |
| 3947990 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.50 | 36.0 | 2.95e-01 | 83.7% | 63.2% |
D2
medium
residues 95-135_183-269_325-386
Domain cluster:
rep: MW073017.1__QPB08588.1__X__00109__D12-244
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13714.13 best | PEP_mutase | 45.9 | 7.70e-12 | 88.9% | 51.4% |
| PF00463.28 | ICL | 66.8 | 2.00e-18 | 64.2% | 16.5% |
| PF00463.28 | ICL | 29.5 | 4.10e-07 | 32.6% | 8.2% |
CATH (89)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1f8iA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.96 | 94.0 | 6.88e-01 | 100.0% | 59.5% |
| 5e9fD01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.92 | 90.0 | 6.70e-01 | 100.0% | 59.4% |
| 1zlpA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.84 | 81.0 | 6.90e-01 | 100.0% | 71.8% |
| 3lyeA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.81 | 79.0 | 6.68e-01 | 100.0% | 68.8% |
| 1s2uB00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.81 | 78.0 | 6.60e-01 | 100.0% | 69.6% |
| 2ze3A01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.80 | 77.0 | 7.12e-01 | 100.0% | 87.9% |
| 3b8iC00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.80 | 77.0 | 6.63e-01 | 100.0% | 71.9% |
| 3l5lA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 67.0 | 5.29e-01 | 98.9% | 86.9% |
| 4qnwA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 66.0 | 5.19e-01 | 100.0% | 88.1% |
| 3f4wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 52.0 | 5.03e-01 | 100.0% | 68.7% |
| 4b3lA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.70 | 65.0 | 4.82e-01 | 100.0% | 72.0% |
| 7fevA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.69 | 65.0 | 4.98e-01 | 100.0% | 84.4% |
| 3l5aA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.69 | 65.0 | 5.09e-01 | 100.0% | 66.6% |
| 2jieA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.69 | 64.0 | 4.84e-01 | 100.0% | 71.2% |
| 3hpxA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.69 | 64.0 | 5.47e-01 | 100.0% | 84.6% |
| 1uhvA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.69 | 64.0 | 5.18e-01 | 100.0% | 63.4% |
| 1m3uA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.68 | 65.0 | 5.74e-01 | 100.0% | 98.5% |
| 2pe4A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 60.0 | 4.61e-01 | 94.7% | 79.1% |
| 3b0pA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 63.0 | 5.89e-01 | 100.0% | 94.0% |
| 1ccwB01 | 3.20.20.240 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Methylmalonyl-CoA mutase | 0.67 | 63.0 | 4.80e-01 | 100.0% | 70.3% |
| 2r8wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 63.0 | 5.37e-01 | 100.0% | 82.5% |
| 1jphA00 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.67 | 62.0 | 4.98e-01 | 99.5% | 86.3% |
| 6ketA01 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.67 | 62.0 | 5.07e-01 | 100.0% | 84.3% |
| 2ftpA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 63.0 | 5.31e-01 | 100.0% | 94.7% |
| 3rdkB00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.67 | 62.0 | 5.10e-01 | 100.0% | 76.6% |
| 4bfaA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 63.0 | 5.71e-01 | 100.0% | 93.9% |
| 1mzhA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 61.0 | 5.75e-01 | 100.0% | 81.8% |
| 3n2xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 62.0 | 5.27e-01 | 100.0% | 70.5% |
| 4f8xA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 61.0 | 5.03e-01 | 100.0% | 89.3% |
| 1fdyB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 62.0 | 5.30e-01 | 100.0% | 82.8% |
| 1aq0A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 61.0 | 5.15e-01 | 98.9% | 81.0% |
| 1jcjA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 62.0 | 5.59e-01 | 100.0% | 79.0% |
| 1g5aA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 61.0 | 4.80e-01 | 100.0% | 74.0% |
| 3ndoA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 62.0 | 5.84e-01 | 100.0% | 84.4% |
| 3oa3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 62.0 | 5.55e-01 | 100.0% | 74.7% |
| 3eb2A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 61.0 | 5.28e-01 | 100.0% | 83.0% |
| 3eegB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 61.0 | 5.38e-01 | 100.0% | 73.5% |
| 3na8A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 62.0 | 5.25e-01 | 100.0% | 82.5% |
| 7lvlA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 62.0 | 5.27e-01 | 100.0% | 83.0% |
| 4nq1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 61.0 | 5.24e-01 | 100.0% | 82.4% |
| 5c54G00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 61.0 | 5.14e-01 | 100.0% | 79.2% |
| 2i14A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 49.0 | 4.94e-01 | 100.0% | 77.5% |
| 2bvdA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.65 | 60.0 | 5.28e-01 | 100.0% | 92.8% |
| 3s5nA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 61.0 | 5.17e-01 | 100.0% | 71.2% |
| 3cprA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 61.0 | 5.12e-01 | 100.0% | 79.8% |
| 5ujwD00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 60.0 | 5.42e-01 | 99.5% | 92.0% |
| 1b4eA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 59.0 | 4.89e-01 | 97.9% | 62.8% |
| 6arhA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 60.0 | 5.11e-01 | 100.0% | 82.3% |
| 8hi7B01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.64 | 60.0 | 5.20e-01 | 100.0% | 78.8% |
| 3di1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 60.0 | 5.14e-01 | 100.0% | 82.1% |
| 2hmcA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 60.0 | 5.00e-01 | 100.0% | 79.9% |
| 5afdA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 60.0 | 5.08e-01 | 100.0% | 64.0% |
| 6b8sA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 59.0 | 4.86e-01 | 100.0% | 74.9% |
| 3qyqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 60.0 | 5.21e-01 | 100.0% | 78.0% |
| 4zxoA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.63 | 59.0 | 4.78e-01 | 100.0% | 72.4% |
| 1yeyA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.63 | 55.0 | 4.65e-01 | 100.0% | 58.0% |
| 1w3iA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 59.0 | 5.05e-01 | 100.0% | 79.5% |
| 4n4pD00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 59.0 | 5.07e-01 | 100.0% | 81.9% |
| 1gteB05 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 59.0 | 4.95e-01 | 100.0% | 90.8% |
| 4dziB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.63 | 58.0 | 4.59e-01 | 100.0% | 90.3% |
| 4mwaA00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.63 | 58.0 | 5.22e-01 | 100.0% | 85.0% |
| 3qfeB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 59.0 | 4.97e-01 | 100.0% | 78.5% |
| 5jvkA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.63 | 58.0 | 4.84e-01 | 100.0% | 61.4% |
| 4xkyA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 58.0 | 4.96e-01 | 100.0% | 81.9% |
| 7ui4A01 | 3.20.20.105 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like | 0.62 | 58.0 | 5.12e-01 | 100.0% | 96.7% |
| 3tuuA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 58.0 | 4.91e-01 | 100.0% | 74.6% |
| 1jpdX02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.62 | 52.0 | 5.08e-01 | 100.0% | 80.7% |
| 4gc3A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.62 | 57.0 | 5.12e-01 | 100.0% | 88.2% |
| 1a3wA02 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.62 | 58.0 | 5.38e-01 | 100.0% | 83.8% |
| 1f6kC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 58.0 | 5.00e-01 | 100.0% | 81.8% |
| 3sqsA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.62 | 52.0 | 4.76e-01 | 99.5% | 68.1% |
| 3ktsA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 54.0 | 5.46e-01 | 100.0% | 94.6% |
| 1losA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 57.0 | 5.50e-01 | 99.5% | 88.0% |
| 1vliA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 57.0 | 4.90e-01 | 100.0% | 80.9% |
| 4mzyA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 46.0 | 4.84e-01 | 99.5% | 87.5% |
| 1pyfA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.61 | 54.0 | 4.57e-01 | 100.0% | 58.2% |
| 5m99A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 57.0 | 4.56e-01 | 100.0% | 64.9% |
| 1q6oB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 56.0 | 5.41e-01 | 100.0% | 88.8% |
| 4ub9A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.59 | 55.0 | 4.46e-01 | 100.0% | 74.8% |
| 2qtfA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 46.0 | 4.89e-01 | 97.4% | 94.6% |
| 2ww5A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 53.0 | 5.26e-01 | 100.0% | 95.5% |
| 1olmC01 | 3.40.525.10 | Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain | 0.56 | 41.0 | 3.57e-01 | 76.3% | 49.1% |
| 3gy1B02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 52.0 | 4.84e-01 | 100.0% | 85.3% |
| 6cmzA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 33.0 | 3.99e-01 | 91.6% | 90.8% |
| 3p7zA01 | 3.40.525.10 | Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain | 0.55 | 37.0 | 3.98e-01 | 86.8% | 79.2% |
| 5lsmG00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 51.0 | 4.17e-01 | 100.0% | 62.5% |
| 4rgbA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 49.0 | 4.34e-01 | 97.9% | 97.8% |
| 4rr9A01 | 3.50.80.10 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase | 0.51 | 31.0 | 3.67e-01 | 75.8% | 86.6% |
| 5vipB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.50 | 44.0 | 4.20e-01 | 96.3% | 80.4% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4547012 | 2002.1.1.22 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ICL | 1.00 | 99.0 | 6.75e-01 | 100.0% | 55.7% |
| 3242984 | 2002.1.1.22 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ICL | 0.97 | 95.0 | 5.75e-01 | 100.0% | 26.9% |
| 3271972 | 2002.1.1.22 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ICL | 0.96 | 94.0 | 6.76e-01 | 100.0% | 55.8% |
| None | — | 0.96 | 94.0 | 6.43e-01 | 100.0% | 67.6% | |
| 3639587 | 2002.1.1.22 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ICL | 0.96 | 94.0 | 6.34e-01 | 100.0% | 63.2% |
| 4092947 | 2002.1.1.22 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ICL | 0.96 | 94.0 | 6.27e-01 | 100.0% | 69.2% |
| None | — | 0.96 | 94.0 | 6.35e-01 | 100.0% | 63.7% | |
| 4174141 | 2002.1.1.22 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ICL | 0.96 | 94.0 | 6.25e-01 | 100.0% | 69.4% |
| 3178839 | 2002.1.1.22 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ICL | 0.92 | 90.0 | 6.23e-01 | 100.0% | 68.5% |
| 3958630 | 2002.1.1.22 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ICL | 0.91 | 65.0 | 6.14e-01 | 72.1% | 80.5% |
| None | — | 0.90 | 87.0 | 7.02e-01 | 100.0% | 62.8% | |
| 4139498 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.90 | 87.0 | 7.02e-01 | 100.0% | 62.8% |
| None | — | 0.86 | 83.0 | 6.90e-01 | 100.0% | 72.3% | |
| 3660965 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.86 | 83.0 | 6.69e-01 | 100.0% | 63.4% |
| None | — | 0.86 | 83.0 | 6.89e-01 | 100.0% | 68.7% | |
| None | — | 0.85 | 83.0 | 6.89e-01 | 100.0% | 69.0% | |
| 3730632 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.85 | 82.0 | 6.76e-01 | 100.0% | 67.4% |
| None | — | 0.85 | 83.0 | 6.90e-01 | 100.0% | 69.5% | |
| None | — | 0.84 | 82.0 | 6.96e-01 | 100.0% | 72.8% | |
| 3278136 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.84 | 82.0 | 6.79e-01 | 100.0% | 66.3% |
| None | — | 0.84 | 82.0 | 6.68e-01 | 100.0% | 62.9% | |
| 4553432 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.84 | 81.0 | 6.68e-01 | 100.0% | 66.5% |
| 4172307 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.83 | 81.0 | 6.67e-01 | 100.0% | 63.9% |
| 161959 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.81 | 78.0 | 6.65e-01 | 100.0% | 68.2% |
| 4295126 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.80 | 78.0 | 6.54e-01 | 100.0% | 96.6% |
| 3730395 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.80 | 76.0 | 6.68e-01 | 98.9% | 76.5% |
| 4498755 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.79 | 77.0 | 6.43e-01 | 100.0% | 75.3% |
| 1102935 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.79 | 76.0 | 6.80e-01 | 99.5% | 88.4% |
| 3694024 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.79 | 77.0 | 6.55e-01 | 100.0% | 71.1% |
| 3956346 | 2002.1.1.22 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ICL | 0.76 | 65.0 | 5.21e-01 | 87.9% | 77.6% |
| 5060345 | 2002.1.1.54 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHO_dh | 0.70 | 66.0 | 5.41e-01 | 100.0% | 86.8% |
| 3670467 | 2002.1.1.115 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_79n | 0.69 | 60.0 | 5.34e-01 | 92.1% | 75.5% |
| 3961478 | 2002.1.1.32 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Oxidored_FMN | 0.69 | 64.0 | 5.75e-01 | 100.0% | 99.6% |
| 4940024 | 2002.1.1.52 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 | 0.68 | 55.0 | 5.31e-01 | 100.0% | 76.1% |
| 328267 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.67 | 63.0 | 5.36e-01 | 100.0% | 81.9% |
| 5009397 | 2002.1.1.32 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Oxidored_FMN | 0.67 | 62.0 | 5.13e-01 | 100.0% | 73.0% |
| 3202655 | 7577.1.1.0 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases | 0.67 | 62.0 | 4.17e-01 | 100.0% | 44.6% |
| 4580377 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.67 | 63.0 | 5.16e-01 | 100.0% | 70.2% |
| 4004818 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.66 | 62.0 | 5.27e-01 | 100.0% | 70.0% |
| 3957968 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.66 | 61.0 | 5.20e-01 | 98.4% | 83.2% |
| 3970636 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.66 | 62.0 | 5.28e-01 | 100.0% | 81.4% |
| 4393639 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.66 | 62.0 | 5.22e-01 | 100.0% | 80.0% |
| 4813634 | 2002.1.1.32 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Oxidored_FMN | 0.66 | 60.0 | 5.18e-01 | 100.0% | 90.0% |
| 3290803 | 2002.1.1.96 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › S-methyl_trans | 0.66 | 61.0 | 5.22e-01 | 100.0% | 70.2% |
| 3726248 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.65 | 61.0 | 5.23e-01 | 100.0% | 81.4% |
| 3966568 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.65 | 62.0 | 5.30e-01 | 100.0% | 83.3% |
| 5058111 | 2002.1.1.3 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TIM | 0.65 | 60.0 | 5.37e-01 | 99.5% | 97.4% |
| 347589 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.65 | 62.0 | 5.27e-01 | 100.0% | 82.7% |
| 4963736 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.65 | 61.0 | 5.14e-01 | 100.0% | 79.0% |
| 4382435 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.64 | 60.0 | 5.10e-01 | 100.0% | 81.3% |
| 3966674 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.64 | 60.0 | 5.18e-01 | 100.0% | 83.1% |
| 3183279 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.64 | 60.0 | 4.92e-01 | 100.0% | 78.2% |
| 4928526 | 2002.1.1.36 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind | 0.64 | 60.0 | 5.15e-01 | 100.0% | 87.2% |
| 4944783 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.64 | 60.0 | 4.86e-01 | 100.0% | 70.4% |
| 4957448 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.64 | 60.0 | 5.08e-01 | 100.0% | 79.3% |
| 2426527 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.64 | 60.0 | 5.13e-01 | 100.0% | 81.3% |
| 4268341 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.64 | 60.0 | 5.13e-01 | 100.0% | 81.0% |
| 4987043 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.64 | 60.0 | 4.84e-01 | 100.0% | 80.0% |
| 4048451 | 2002.1.1.76 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC | 0.64 | 60.0 | 5.53e-01 | 100.0% | 95.8% |
| 4996921 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.64 | 60.0 | 5.14e-01 | 100.0% | 81.7% |
| 4566567 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.63 | 59.0 | 5.07e-01 | 100.0% | 78.6% |
| 4146766 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.63 | 60.0 | 5.14e-01 | 100.0% | 92.3% |
| 5076752 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.63 | 54.0 | 4.76e-01 | 100.0% | 63.0% |
| 1519239 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.63 | 59.0 | 4.99e-01 | 100.0% | 81.3% |
| 1933305 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.63 | 58.0 | 4.85e-01 | 100.0% | 61.8% |
| 4163118 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.62 | 58.0 | 4.96e-01 | 100.0% | 79.7% |
| 5025437 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.62 | 58.0 | 4.96e-01 | 100.0% | 81.0% |
| 3853558 | 2496.1.1.1 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO | 0.61 | 41.0 | 4.15e-01 | 86.8% | 66.2% |
| 3590103 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.60 | 55.0 | 4.92e-01 | 100.0% | 80.4% |
| 3226489 | 2496.1.1.1 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO | 0.59 | 43.0 | 4.36e-01 | 86.3% | 76.2% |
| 5053428 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.59 | 54.0 | 4.17e-01 | 100.0% | 67.9% |
| 3628076 | 2496.1.1.1 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO | 0.59 | 43.0 | 4.27e-01 | 74.7% | 79.0% |
| 2096151 | 2002.1.1.45 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_31_2nd | 0.58 | 50.0 | 4.03e-01 | 94.7% | 48.5% |
| 5064933 | 2004.1.1.141 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N | 0.58 | 52.0 | 5.04e-01 | 99.5% | 87.1% |
| 3601602 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.58 | 43.0 | 4.05e-01 | 76.3% | 85.7% |
| 3580511 | 2496.1.1.1 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO | 0.57 | 43.0 | 4.11e-01 | 76.8% | 69.8% |
| 1546466 | 2496.1.1.1 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO | 0.57 | 42.0 | 4.14e-01 | 85.8% | 70.6% |
| 3226176 | 2496.1.1.1 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO | 0.57 | 42.0 | 4.14e-01 | 86.3% | 70.2% |
| 4028406 | 2496.1.1.1 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO | 0.57 | 41.0 | 3.94e-01 | 86.8% | 64.1% |
| 3928585 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.55 | 48.0 | 4.57e-01 | 95.3% | 99.1% |
| 3187868 | 2003.1.1.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA | 0.54 | 49.0 | 4.24e-01 | 100.0% | 97.4% |
| 4093125 | 247.1.1.24 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B+Lactamase_B_2 | 0.53 | 48.0 | 4.09e-01 | 99.5% | 91.1% |
| 3965543 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.52 | 44.0 | 4.05e-01 | 87.9% | 87.9% |
| 4997796 | 2006.1.6.45 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 | 0.52 | 44.0 | 3.89e-01 | 92.1% | 91.7% |
| 3239445 | 2496.1.1.1 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO | 0.51 | 42.0 | 4.32e-01 | 100.0% | 91.7% |
D3
medium
residues 387-440
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3f2bA05 | 6.10.50.10 | Special › Helix non-globular › Insulin-like, subunit E › | 0.80 | 54.0 | 5.69e-01 | 98.1% | 79.2% |
| 3o60A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.77 | 47.0 | 3.20e-01 | 81.5% | 18.7% |
| 1vq8P03 | 1.10.1200.60 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › | 0.69 | 47.0 | 4.74e-01 | 72.2% | 81.8% |
| 7y11B01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.67 | 47.0 | 4.50e-01 | 83.3% | 63.5% |
| 3q8gA01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.66 | 45.0 | 3.94e-01 | 83.3% | 48.1% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.63 | 43.0 | 4.45e-01 | 98.1% | 81.2% |
| 3b0xA01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.61 | 47.0 | 4.20e-01 | 92.6% | 87.4% |
| 1ic8A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 46.0 | 3.88e-01 | 83.3% | 60.6% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.60 | 45.0 | 3.82e-01 | 79.6% | 64.7% |
| 2ltuA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.60 | 47.0 | 4.60e-01 | 100.0% | 80.6% |
| 5jazA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.56 | 42.0 | 3.58e-01 | 81.5% | 67.0% |
| 4htlA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 43.0 | 3.09e-01 | 100.0% | 27.9% |
| 4zqeA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.53 | 43.0 | 3.59e-01 | 88.9% | 63.5% |
| 1qo0D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 4.27e-01 | 81.5% | 100.0% |
| 3e61A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 43.0 | 3.27e-01 | 96.3% | 91.4% |
| 3dv8A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 37.0 | 3.25e-01 | 75.9% | 75.6% |
| 3q1xA01 | 1.10.3130.10 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 | 0.51 | 42.0 | 3.27e-01 | 100.0% | 77.0% |
| 3tw6A06 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.51 | 31.0 | 3.16e-01 | 77.8% | 57.4% |
| 2hp0A02 | 3.30.1330.120 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 2-methylcitrate dehydratase PrpD | 0.51 | 42.0 | 3.32e-01 | 98.1% | 91.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4547012 | 2002.1.1.22 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ICL | 0.95 | 90.0 | 5.05e-01 | 100.0% | 10.6% |
| 5060848 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.72 | 51.0 | 4.96e-01 | 75.9% | 90.0% |
| 4982784 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.70 | 47.0 | 4.59e-01 | 96.3% | 63.3% |
| 5043412 | 1025.1.1.0 ↗ | alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain | 0.67 | 49.0 | 3.82e-01 | 77.8% | 76.5% |
| 3271988 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.67 | 50.0 | 4.56e-01 | 81.5% | 64.4% |
| 3600118 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.64 | 48.0 | 4.01e-01 | 81.5% | 68.4% |
| 5001590 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.61 | 38.0 | 3.80e-01 | 79.6% | 61.8% |
| 4930318 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.54 | 44.0 | 3.53e-01 | 100.0% | 44.6% |
| 3468645 | 4177.1.1.11 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › DUF632 | 0.53 | 42.0 | 2.80e-01 | 92.6% | 20.4% |
D4
medium
residues 476-534
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1f8iA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.70 | 60.0 | 3.57e-01 | 94.9% | 13.3% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965904 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.98 | 87.0 | 4.91e-01 | 94.9% | 10.4% |
| 4547012 | 2002.1.1.22 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ICL | 0.94 | 79.0 | 4.49e-01 | 91.5% | 10.0% |
| None | — | 0.88 | 78.0 | 4.40e-01 | 94.9% | 10.0% | |
| 4427480 | 207.1.1.149 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4, LRR_9 | 0.59 | 43.0 | 2.81e-01 | 91.5% | 15.9% |