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CAKLQF020000026.1__CAH1092393.1__SAMEA5780031_03522__00004
Bact-VirCAKLQF020000026.1__CAH1092393.1__SAMEA5780031_03522__00004
Identity
- Kingdom:
- phage
Quality
89.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 258-408
Domain cluster:
rep: IMGVR_UViG_3300020322_000030-3300020322-Ga0211563_10036328__D183-326
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00909.27 best | Ammonium_transp | 147.6 | 6.10e-43 | 98.7% | 35.3% |
D2
medium
residues 68-195
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00909.27 best | Ammonium_transp | 95.4 | 4.50e-27 | 98.4% | 30.6% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b2hA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.98 | 90.0 | 6.05e-01 | 100.0% | 30.9% |
| 1u7gA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.96 | 94.0 | 6.34e-01 | 100.0% | 33.4% |
| 5aexJ00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.89 | 85.0 | 5.64e-01 | 100.0% | 30.7% |
| 6zhiB02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.59 | 36.0 | 4.28e-01 | 86.7% | 92.8% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 43.0 | 4.49e-01 | 88.3% | 83.1% |
| 2vxxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.57 | 36.0 | 3.30e-01 | 88.3% | 47.1% |
| 2ipcA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.56 | 44.0 | 3.51e-01 | 82.0% | 64.5% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.55 | 45.0 | 4.26e-01 | 87.5% | 98.7% |
| 5h5mA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.55 | 42.0 | 4.23e-01 | 87.5% | 78.5% |
| 1f1eA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.55 | 46.0 | 4.43e-01 | 93.0% | 92.7% |
| 4ceiA03 | 6.10.250.2380 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 33.0 | 3.51e-01 | 89.1% | 67.9% |
| 2jokA01 | 1.10.4120.10 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › SopE-like, GEF domain | 0.54 | 45.0 | 4.06e-01 | 89.8% | 78.9% |
| 2oexA01 | 1.20.120.560 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › alix/aip1 in complex with the ypdl late domain | 0.53 | 44.0 | 4.31e-01 | 89.1% | 89.5% |
| 4nqfA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.52 | 43.0 | 4.10e-01 | 89.1% | 75.2% |
| 1ad6A00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 47.0 | 4.17e-01 | 100.0% | 77.3% |
| 2okuA00 | 1.20.120.470 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Acyl-CoA dehydrogenase, C-terminal domain | 0.51 | 40.0 | 4.16e-01 | 100.0% | 89.3% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3973609 | 5049.1.1.0 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter | 0.99 | 97.0 | 6.43e-01 | 100.0% | 34.1% |
| 4010363 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.98 | 96.0 | 6.40e-01 | 100.0% | 31.6% |
| 4927138 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.98 | 96.0 | 6.20e-01 | 100.0% | 29.3% |
| 3283710 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.97 | 95.0 | 6.15e-01 | 100.0% | 32.5% |
| 4033903 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.97 | 95.0 | 6.29e-01 | 100.0% | 31.7% |
| 5020907 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.96 | 88.0 | 5.76e-01 | 100.0% | 27.3% |
| 3721317 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.96 | 93.0 | 6.03e-01 | 100.0% | 27.9% |
| 3250062 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.95 | 87.0 | 5.73e-01 | 100.0% | 28.3% |
| 4012004 | 5049.1.1.0 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter | 0.95 | 93.0 | 6.02e-01 | 100.0% | 28.6% |
| 3685147 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.95 | 93.0 | 6.00e-01 | 100.0% | 28.3% |
| 4989953 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.95 | 92.0 | 6.09e-01 | 100.0% | 33.2% |
| 3420153 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.94 | 92.0 | 5.93e-01 | 100.0% | 32.2% |
| 2142445 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.94 | 88.0 | 5.89e-01 | 100.0% | 30.6% |
| 4200884 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.94 | 91.0 | 6.05e-01 | 100.0% | 30.8% |
| 3783547 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.93 | 89.0 | 5.90e-01 | 100.0% | 31.0% |
| 3246515 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.93 | 85.0 | 5.63e-01 | 100.0% | 28.5% |
| 3726026 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.93 | 89.0 | 5.86e-01 | 100.0% | 33.3% |
| 3245465 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.92 | 86.0 | 5.58e-01 | 100.0% | 27.1% |
| 3375032 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.92 | 89.0 | 5.71e-01 | 100.0% | 29.8% |
| 4488616 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.92 | 88.0 | 5.91e-01 | 100.0% | 31.4% |
| 3402233 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.91 | 87.0 | 5.74e-01 | 100.0% | 28.9% |
| 3934446 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.91 | 88.0 | 5.72e-01 | 100.0% | 27.8% |
| 3603173 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.88 | 83.0 | 5.54e-01 | 100.0% | 30.2% |
| 3313336 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.86 | 72.0 | 4.93e-01 | 92.2% | 28.8% |
| 3990058 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.59 | 42.0 | 3.24e-01 | 74.2% | 65.5% |
| 3955372 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.58 | 43.0 | 3.31e-01 | 77.3% | 72.6% |
| 4946488 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.56 | 46.0 | 3.93e-01 | 87.5% | 78.0% |
| 3633437 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.56 | 47.0 | 3.99e-01 | 100.0% | 53.3% |
| 4012556 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.54 | 47.0 | 3.91e-01 | 100.0% | 53.5% |
| 3264751 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.54 | 38.0 | 3.71e-01 | 72.7% | 85.5% |
| 3477220 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.54 | 48.0 | 3.90e-01 | 100.0% | 52.2% |
| 5045639 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.53 | 47.0 | 4.12e-01 | 100.0% | 96.5% |
| 5074351 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.51 | 36.0 | 3.79e-01 | 85.2% | 81.4% |
| 5034944 | 1079.1.1.0 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA | 0.51 | 38.0 | 3.03e-01 | 76.6% | 93.3% |
| 3973500 | 601.1.2.144 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › HBM | 0.51 | 35.0 | 3.66e-01 | 85.9% | 77.4% |
D3
medium
residues 196-252
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00909.27 best | Ammonium_transp | 69.1 | 4.30e-19 | 100.0% | 13.5% |
D4
medium
residues 409-465
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00909.27 best | Ammonium_transp | 46.4 | 3.50e-12 | 98.2% | 12.8% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ukcA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.55 | 37.0 | 2.78e-01 | 70.2% | 89.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4025859 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.78 | 53.0 | 4.75e-01 | 71.9% | 98.8% |
| 3327700 | 5049.1.1.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Ammonium transporter › Ammonium_transp | 0.75 | 66.0 | 4.13e-01 | 100.0% | 25.4% |