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CAKLQF020000026.1__CAH1092485.1__SAMEA5780031_03569__00050

Bact-Vir

CAKLQF020000026.1__CAH1092485.1__SAMEA5780031_03569__00050

Identity

Kingdom:
phage

Quality

88.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 60-241
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01203.26 best T2SSN 36.4 8.50e-09 87.9% 68.7%
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2af5A02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.61 42.0 4.72e-01 98.4% 92.8%
4fqeA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.60 44.0 4.57e-01 86.3% 80.0%
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.59 36.0 4.41e-01 72.5% 97.3%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.59 34.0 4.38e-01 83.5% 99.0%
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.57 53.0 4.03e-01 100.0% 54.0%
1xkwA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.54 49.0 3.53e-01 98.4% 49.4%
3sy9C01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.54 49.0 3.95e-01 100.0% 63.2%
2ia7A00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 23.0 2.82e-01 70.9% 61.3%
1d6uA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.51 37.0 2.86e-01 75.8% 96.3%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 37.0 3.92e-01 76.9% 84.2%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4583479 71.1.1.3 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.71 33.0 3.41e-01 97.8% 45.7%
3251263 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.65 54.0 4.16e-01 100.0% 41.7%
3812869 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.62 28.0 3.70e-01 83.0% 76.0%
5075159 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.62 40.0 4.24e-01 99.5% 71.5%
3526427 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.60 56.0 4.50e-01 100.0% 95.6%
3824904 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.60 56.0 4.57e-01 100.0% 70.3%
3514632 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.59 51.0 3.96e-01 100.0% 43.4%
3683051 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.59 50.0 3.85e-01 100.0% 40.2%
4114942 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.59 35.0 3.58e-01 98.4% 59.4%
3628236 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.59 51.0 3.85e-01 100.0% 39.2%
3635423 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.58 40.0 4.03e-01 91.8% 69.2%
3786957 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.57 53.0 3.96e-01 100.0% 45.1%
3379458 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.57 53.0 4.33e-01 100.0% 71.8%
4029009 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.57 53.0 3.99e-01 100.0% 46.7%
3601033 77.2.1.0 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.57 39.0 4.28e-01 97.3% 85.5%
3858437 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.57 40.0 3.94e-01 94.5% 66.2%
3967320 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.56 52.0 4.10e-01 100.0% 63.2%
3746311 844.1.1.4 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase 0.54 44.0 4.14e-01 100.0% 71.4%
2649512 77.1.1.1 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.54 37.0 3.72e-01 96.2% 66.7%
3871207 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.54 50.0 3.76e-01 100.0% 48.3%
4469406 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.52 37.0 3.32e-01 76.4% 52.8%
4583801 77.1.1.1 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.51 42.0 3.85e-01 92.9% 65.7%
3062889 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.51 33.0 3.46e-01 82.4% 69.5%
3886715 12.3.1.43 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › NCU-G1 0.50 42.0 3.45e-01 89.6% 88.4%