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CAKLQF020000027.1__CAH1092909.1__SAMEA5780031_03596__00017

Bact-Vir

CAKLQF020000027.1__CAH1092909.1__SAMEA5780031_03596__00017

Identity

Kingdom:
phage

Quality

90.4 mean pLDDT

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-75
PDB
Domain cluster: rep: MG209611.1__ATW59386.1__Cl131_gp118__00118__D3-61
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.89 73.0 6.59e-01 100.0% 66.7%
7xi5A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.89 66.0 7.34e-01 92.3% 100.0%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.88 72.0 7.31e-01 93.8% 89.1%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.87 67.0 5.94e-01 95.4% 58.9%
7ezyA01 1.10.3100.10 Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein 0.84 68.0 5.59e-01 100.0% 49.6%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 65.0 6.18e-01 93.8% 74.7%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 63.0 6.32e-01 93.8% 83.3%
3u3wA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 61.0 6.05e-01 95.4% 79.7%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 61.0 6.19e-01 93.8% 85.7%
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 62.0 6.13e-01 95.4% 84.1%
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 58.0 5.69e-01 95.4% 77.5%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 54.0 5.47e-01 93.8% 78.8%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 59.0 5.70e-01 95.4% 78.4%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 56.0 5.62e-01 89.2% 81.5%
7n1nB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.73 58.0 5.91e-01 95.4% 92.1%
4ghjB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 55.0 5.32e-01 95.4% 72.4%
1x57A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 65.0 5.79e-01 100.0% 76.9%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 60.0 6.01e-01 100.0% 93.8%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 63.0 5.99e-01 100.0% 96.1%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 56.0 5.52e-01 95.4% 80.6%
3fymA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 58.0 5.47e-01 93.8% 74.4%
2d5vA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 62.0 5.85e-01 100.0% 84.8%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 62.0 5.31e-01 100.0% 78.6%
4jcyA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 61.0 5.47e-01 100.0% 87.0%
2ewtA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 55.0 5.43e-01 95.4% 83.1%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 51.0 4.87e-01 95.4% 71.1%
7e84A03 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 45.0 3.67e-01 80.0% 65.0%
1he1A00 1.20.120.260 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Virulence factor YopE uncharacterised domain 0.58 49.0 3.99e-01 100.0% 63.0%
3nx3A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.58 51.0 3.45e-01 100.0% 88.7%
4is7A02 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.56 41.0 3.99e-01 78.5% 86.1%
6arhA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 49.0 3.20e-01 100.0% 97.0%
3eb2A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 39.0 2.66e-01 100.0% 18.8%
2oznB01 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.53 44.0 4.18e-01 100.0% 91.3%
4qozC00 1.10.8.1120 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Histone RNA hairpin-binding protein RNA-binding domain 0.52 40.0 3.96e-01 100.0% 79.5%
4h33A00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 36.0 3.34e-01 76.9% 68.1%
7oq4Z01 1.20.120.950 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 0.51 43.0 3.82e-01 98.5% 76.5%
3e0fA02 1.10.150.650 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.50 43.0 4.21e-01 100.0% 86.5%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3965190 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.88 75.0 7.53e-01 93.8% 90.8%
3944622 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.88 69.0 6.39e-01 95.4% 67.5%
2809324 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.87 75.0 7.21e-01 98.5% 82.2%
4945219 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.81 63.0 6.50e-01 95.4% 90.0%
4978931 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.79 65.0 6.34e-01 95.4% 82.9%
4448496 101.1.4.27 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.79 62.0 6.12e-01 93.8% 80.0%
3947329 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 59.0 5.99e-01 93.8% 83.1%
3947107 101.1.4.47 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF1456 0.78 69.0 6.55e-01 96.9% 85.3%
3980119 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 60.0 5.89e-01 95.4% 80.0%
3982126 101.1.4.47 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF1456 0.76 69.0 6.29e-01 100.0% 77.6%
5027691 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 62.0 6.10e-01 100.0% 84.3%
3587619 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.76 63.0 6.15e-01 95.4% 84.3%
5083397 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.76 69.0 5.92e-01 100.0% 72.0%
4008447 101.1.4.47 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF1456 0.74 64.0 5.99e-01 96.9% 80.0%
3662968 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 60.0 6.25e-01 95.4% 100.0%
3288109 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 59.0 5.79e-01 95.4% 82.9%
3221171 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.72 64.0 5.37e-01 98.5% 59.1%
4963279 101.1.4.92 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF5791 0.72 60.0 5.90e-01 100.0% 89.9%
3940276 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.71 62.0 6.00e-01 100.0% 89.3%
3237222 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.70 63.0 5.35e-01 100.0% 70.5%
3537934 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.70 63.0 6.03e-01 100.0% 88.0%
3987782 101.1.4.16 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 0.70 58.0 5.05e-01 93.8% 61.0%
3218304 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.69 60.0 5.33e-01 98.5% 69.5%
3925208 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.68 59.0 5.25e-01 100.0% 73.7%
3960391 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.58 47.0 4.57e-01 95.4% 97.3%
3856853 101.1.1.53 ↗ alpha arrays › HTH › HTH › Three-helical HTH › BEN 0.58 43.0 3.77e-01 83.1% 53.3%
3164420 101.1.1.63 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.57 40.0 4.32e-01 73.8% 89.1%
4932060 3054.1.1.0 ↗ alpha arrays › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol 0.57 46.0 3.99e-01 92.3% 70.0%
3214843 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.54 43.0 3.43e-01 95.4% 79.4%
347589 2002.1.1.29 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.53 41.0 2.74e-01 98.5% 19.7%
5010063 604.24.1.1 ↗ alpha bundles › Spectrin repeat-like › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › PaaX_C 0.51 37.0 3.19e-01 81.5% 49.0%
3970615 2484.1.1.32 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_C 0.50 44.0 3.01e-01 98.5% 97.9%