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CAKLQF020000027.1__CAH1092995.1__SAMEA5780031_03621__00042
Bact-VirCAKLQF020000027.1__CAH1092995.1__SAMEA5780031_03621__00042
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-133
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.81 | 42.0 | 4.84e-01 | 72.7% | 68.0% |
| 2bvlA01 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 42.0 | 4.54e-01 | 72.7% | 61.6% |
| 4hwhE00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.77 | 48.0 | 5.06e-01 | 73.7% | 70.5% |
| 4dwlA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.77 | 46.0 | 4.52e-01 | 71.7% | 55.6% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 51.0 | 5.99e-01 | 70.7% | 100.0% |
| 1yf2A02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.74 | 58.0 | 5.63e-01 | 80.8% | 99.1% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 58.0 | 5.87e-01 | 84.8% | 89.9% |
| 2fcwA00 | 1.20.81.10 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain | 0.72 | 54.0 | 5.28e-01 | 77.8% | 81.1% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 50.0 | 5.75e-01 | 75.8% | 100.0% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.71 | 57.0 | 4.11e-01 | 85.9% | 69.5% |
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.69 | 51.0 | 4.90e-01 | 75.8% | 74.5% |
| 4mk3A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.69 | 50.0 | 4.76e-01 | 75.8% | 64.3% |
| 4q4hA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.69 | 58.0 | 4.01e-01 | 89.9% | 96.9% |
| 4gltA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.69 | 49.0 | 4.72e-01 | 73.7% | 64.0% |
| 2vs0A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.69 | 48.0 | 5.22e-01 | 71.7% | 87.8% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 49.0 | 4.67e-01 | 73.7% | 63.2% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.69 | 44.0 | 4.38e-01 | 78.8% | 61.3% |
| 7metA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.68 | 59.0 | 4.13e-01 | 93.9% | 98.4% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 55.0 | 4.19e-01 | 87.9% | 76.3% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 50.0 | 4.63e-01 | 78.8% | 75.8% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.67 | 47.0 | 4.52e-01 | 72.7% | 64.3% |
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.66 | 53.0 | 4.73e-01 | 85.9% | 85.1% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.66 | 54.0 | 4.09e-01 | 89.9% | 38.8% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 47.0 | 4.73e-01 | 78.8% | 75.5% |
| 8a1gC01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.65 | 49.0 | 4.09e-01 | 81.8% | 71.8% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.65 | 46.0 | 4.91e-01 | 75.8% | 89.7% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.64 | 49.0 | 4.42e-01 | 87.9% | 59.3% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.64 | 47.0 | 4.98e-01 | 77.8% | 95.3% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 51.0 | 5.06e-01 | 92.9% | 88.2% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.61 | 50.0 | 4.71e-01 | 92.9% | 75.2% |
| 3nkzA00 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.57 | 37.0 | 3.74e-01 | 90.9% | 64.9% |
| 2kg7B00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.53 | 40.0 | 4.05e-01 | 88.9% | 84.5% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4979047 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 53.0 | 4.45e-01 | 71.7% | 80.0% |
| 3284863 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.75 | 54.0 | 4.01e-01 | 73.7% | 57.3% |
| 3192846 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.75 | 57.0 | 5.19e-01 | 77.8% | 67.2% |
| 4993050 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.75 | 55.0 | 4.20e-01 | 75.8% | 38.6% |
| 3694629 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.75 | 50.0 | 5.56e-01 | 72.7% | 85.0% |
| 3609435 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.75 | 54.0 | 5.67e-01 | 74.7% | 97.8% |
| 3961790 | 150.8.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › PPE | 0.75 | 51.0 | 4.65e-01 | 70.7% | 55.4% |
| 3234964 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.75 | 58.0 | 5.61e-01 | 80.8% | 85.5% |
| 3626992 | 632.8.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › Alpha-2-MRAP_C | 0.75 | 54.0 | 5.33e-01 | 74.7% | 96.2% |
| 4175684 | 3291.1.1.232 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Paralemmin | 0.74 | 54.0 | 4.85e-01 | 74.7% | 83.1% |
| 3693029 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.74 | 53.0 | 4.25e-01 | 74.7% | 40.6% |
| 3172910 | 603.1.1.99 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 | 0.74 | 52.0 | 5.09e-01 | 71.7% | 67.6% |
| 3764271 | 3922.1.1.348 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › CC_CDK5RAP2 | 0.73 | 57.0 | 5.21e-01 | 80.8% | 74.4% |
| 4219218 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.73 | 55.0 | 5.35e-01 | 78.8% | 83.6% |
| 3785816 | 4.1.1.369 ↗ | beta barrels › SH3 › SH3 › SH3 › Not3 | 0.72 | 51.0 | 4.52e-01 | 72.7% | 60.7% |
| 3897805 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.72 | 52.0 | 4.25e-01 | 74.7% | 42.9% |
| 3284621 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.72 | 51.0 | 5.50e-01 | 73.7% | 94.1% |
| 3246869 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.72 | 52.0 | 3.85e-01 | 74.7% | 33.3% |
| 3961347 | 150.5.1.53 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PPE | 0.72 | 51.0 | 5.50e-01 | 74.7% | 85.9% |
| 3627448 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.72 | 56.0 | 5.42e-01 | 81.8% | 90.9% |
| 3608116 | 5086.1.1.177 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › KIF9 | 0.71 | 54.0 | 4.66e-01 | 78.8% | 57.2% |
| 4655883 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.71 | 51.0 | 5.13e-01 | 77.8% | 74.0% |
| 4179301 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.71 | 55.0 | 5.31e-01 | 81.8% | 89.1% |
| 3175481 | 1065.1.1.0 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain | 0.70 | 55.0 | 4.48e-01 | 82.8% | 70.6% |
| 3621676 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.70 | 53.0 | 4.82e-01 | 79.8% | 64.6% |
| 5072280 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.69 | 55.0 | 4.21e-01 | 83.8% | 39.1% |
| 4092397 | 109.4.1.1448 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_7, TPR_10, TPR_12, TPR_MalT | 0.69 | 54.0 | 3.39e-01 | 81.8% | 86.2% |
| 3222544 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.69 | 55.0 | 5.00e-01 | 83.8% | 66.2% |
| 3288367 | 150.8.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › PPE | 0.68 | 49.0 | 4.09e-01 | 74.7% | 48.2% |
| 4002563 | 192.8.1.303 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Tmemb_cc2 | 0.67 | 50.0 | 4.08e-01 | 77.8% | 42.8% |
| 3887920 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.67 | 51.0 | 4.42e-01 | 81.8% | 69.0% |
| 3873167 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.67 | 47.0 | 4.09e-01 | 73.7% | 48.4% |
| 3737920 | 1065.1.1.0 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain | 0.67 | 54.0 | 4.59e-01 | 89.9% | 62.4% |
| 4489485 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.66 | 52.0 | 4.13e-01 | 83.8% | 93.3% |
| 3377936 | 3922.1.1.173 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF3493 | 0.66 | 52.0 | 5.62e-01 | 84.8% | 100.0% |
| 3745112 | 3755.3.1.298 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › ING | 0.66 | 56.0 | 5.24e-01 | 89.9% | 97.5% |
| 3935140 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.66 | 52.0 | 4.30e-01 | 85.9% | 52.8% |
| 3199608 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.65 | 51.0 | 4.90e-01 | 81.8% | 85.5% |
| 4025148 | 4163.1.1.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like | 0.65 | 52.0 | 4.66e-01 | 84.8% | 82.2% |
| 3875814 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.64 | 51.0 | 3.48e-01 | 83.8% | 25.2% |
| 3657123 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.64 | 52.0 | 5.33e-01 | 86.9% | 93.7% |
| 3598120 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.63 | 50.0 | 4.69e-01 | 84.8% | 72.5% |
| 4026893 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.63 | 46.0 | 3.71e-01 | 77.8% | 39.0% |
| 4543045 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.62 | 52.0 | 3.78e-01 | 93.9% | 97.3% |
| 3718408 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.62 | 45.0 | 4.38e-01 | 90.9% | 69.1% |
| 3864054 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.62 | 48.0 | 4.49e-01 | 83.8% | 70.4% |
| 3731867 | 3758.1.1.34 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › AIP3 | 0.61 | 51.0 | 3.74e-01 | 92.9% | 33.2% |
| 3194840 | 3755.3.1.353 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › AIP3 | 0.60 | 50.0 | 3.79e-01 | 92.9% | 35.8% |
| 3635408 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.60 | 48.0 | 4.30e-01 | 85.9% | 84.3% |
| 3602790 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.60 | 52.0 | 4.17e-01 | 99.0% | 93.7% |
| 5016953 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.59 | 49.0 | 4.25e-01 | 92.9% | 75.0% |
| 4387171 | 603.5.1.18 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › Med30 | 0.58 | 49.0 | 4.35e-01 | 98.0% | 63.2% |
| 3564754 | 604.1.1.96 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Bap31 | 0.55 | 42.0 | 3.84e-01 | 93.9% | 60.7% |
| 3574330 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.54 | 45.0 | 4.36e-01 | 96.0% | 85.2% |