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CAKLQF020000029.1__CAH1093745.1__SAMEA5780031_03756__00048
Bact-VirCAKLQF020000029.1__CAH1093745.1__SAMEA5780031_03756__00048
Identity
- Kingdom:
- phage
Quality
91.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-218
Domain cluster:
rep: Mad1_20_16_scaffold_0_curated_closed_complete_start-adj_prodigal-single.1__X__X__00391__D1-117_229-334
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00579.32 best | tRNA-synt_1b | 203.5 | 6.60e-60 | 100.0% | 62.7% |
CATH (67)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1h3fA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.96 | 85.0 | 8.27e-01 | 100.0% | 84.6% |
| 1jilA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.94 | 91.0 | 8.46e-01 | 100.0% | 86.4% |
| 2pidA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.92 | 89.0 | 8.10e-01 | 100.0% | 87.4% |
| 1j1uA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.88 | 78.0 | 7.60e-01 | 100.0% | 85.2% |
| 1y42X01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.87 | 84.0 | 7.20e-01 | 100.0% | 78.7% |
| 1j09A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.86 | 54.0 | 6.66e-01 | 99.5% | 96.7% |
| 1qrsA05 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.84 | 55.0 | 6.76e-01 | 98.9% | 99.2% |
| 1n3lA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.84 | 79.0 | 7.49e-01 | 100.0% | 85.6% |
| 3do8A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.83 | 54.0 | 6.27e-01 | 98.9% | 88.9% |
| 2cycA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.83 | 79.0 | 7.30e-01 | 100.0% | 85.4% |
| 1yi8B01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.82 | 78.0 | 7.31e-01 | 99.5% | 83.8% |
| 3p0hB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.82 | 56.0 | 4.59e-01 | 100.0% | 41.4% |
| 3p0hB02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.82 | 73.0 | 6.09e-01 | 100.0% | 58.2% |
| 2j5bB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.81 | 70.0 | 6.84e-01 | 100.0% | 83.2% |
| 2el7B01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.81 | 76.0 | 7.06e-01 | 99.5% | 81.2% |
| 3a04A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.81 | 75.0 | 6.65e-01 | 100.0% | 70.9% |
| 2yy5A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.81 | 75.0 | 7.02e-01 | 99.5% | 82.3% |
| 6ncrB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.81 | 77.0 | 7.02e-01 | 100.0% | 79.4% |
| 3u1vA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.81 | 74.0 | 6.94e-01 | 98.9% | 81.9% |
| 3n8hA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.79 | 64.0 | 6.55e-01 | 100.0% | 88.1% |
| 1ufvA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.78 | 63.0 | 6.54e-01 | 100.0% | 89.5% |
| 3focA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.78 | 74.0 | 6.21e-01 | 100.0% | 72.5% |
| 1r6uA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.77 | 73.0 | 6.45e-01 | 100.0% | 71.3% |
| 3b7wA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.77 | 35.0 | 2.62e-01 | 100.0% | 18.6% |
| 3hzrA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.77 | 72.0 | 6.26e-01 | 100.0% | 69.2% |
| 4wnyA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.73 | 51.0 | 5.95e-01 | 100.0% | 97.7% |
| 1q77A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.70 | 51.0 | 5.78e-01 | 100.0% | 98.6% |
| 4x7rA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.70 | 48.0 | 4.64e-01 | 100.0% | 62.7% |
| 4h3sA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.69 | 65.0 | 5.16e-01 | 100.0% | 66.3% |
| 3oqiA00 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.69 | 64.0 | 5.97e-01 | 100.0% | 92.8% |
| 4g6zA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 65.0 | 5.41e-01 | 100.0% | 70.9% |
| 2x0kA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 50.0 | 5.01e-01 | 99.5% | 74.2% |
| 2x9qB00 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.67 | 62.0 | 5.85e-01 | 100.0% | 85.1% |
| 3oqvA00 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.67 | 62.0 | 5.92e-01 | 100.0% | 96.2% |
| 3aiiA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.67 | 63.0 | 5.26e-01 | 100.0% | 73.2% |
| 2pr7A00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.65 | 42.0 | 4.80e-01 | 100.0% | 87.6% |
| 2hqbA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 35.0 | 4.16e-01 | 98.9% | 77.9% |
| 4n9wA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.61 | 40.0 | 4.01e-01 | 99.5% | 64.5% |
| 2nyvA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.61 | 43.0 | 4.74e-01 | 100.0% | 87.5% |
| 4g2tA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.61 | 44.0 | 4.28e-01 | 99.5% | 66.3% |
| 3wxmB02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.61 | 34.0 | 4.05e-01 | 99.5% | 80.3% |
| 3obwA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.60 | 33.0 | 3.94e-01 | 100.0% | 80.5% |
| 1ydhA00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 42.0 | 4.26e-01 | 100.0% | 73.4% |
| 4n9wA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.59 | 40.0 | 4.13e-01 | 100.0% | 72.3% |
| 2y0eB03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 41.0 | 3.90e-01 | 100.0% | 60.3% |
| 3quaA00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 42.0 | 4.25e-01 | 100.0% | 74.9% |
| 3c48A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.58 | 40.0 | 3.79e-01 | 100.0% | 58.0% |
| 2yv5A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 45.0 | 4.84e-01 | 100.0% | 96.2% |
| 2bfwA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.57 | 39.0 | 3.94e-01 | 100.0% | 68.8% |
| 1wviA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.56 | 41.0 | 4.62e-01 | 100.0% | 95.9% |
| 4q1tB01 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.56 | 52.0 | 4.68e-01 | 100.0% | 86.4% |
| 2akoA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.56 | 52.0 | 4.72e-01 | 99.5% | 92.1% |
| 4nbiB00 | 3.50.80.10 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase | 0.56 | 41.0 | 4.48e-01 | 100.0% | 91.4% |
| 3ih5A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 49.0 | 4.69e-01 | 99.5% | 82.0% |
| 3mc3A00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.56 | 36.0 | 4.43e-01 | 85.3% | 100.0% |
| 2bisA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 43.0 | 3.94e-01 | 100.0% | 62.2% |
| 3d6jA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.54 | 40.0 | 4.41e-01 | 100.0% | 96.5% |
| 2ap9B00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.54 | 49.0 | 4.23e-01 | 100.0% | 85.3% |
| 2x0dA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 37.0 | 3.91e-01 | 100.0% | 76.9% |
| 3qi7A01 | 3.40.50.11400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 37.0 | 4.07e-01 | 100.0% | 88.3% |
| 4mixA00 | 3.90.550.20 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › | 0.53 | 49.0 | 4.29e-01 | 100.0% | 88.8% |
| 1pswA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 41.0 | 4.23e-01 | 100.0% | 83.5% |
| 1z5yE00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 32.0 | 3.68e-01 | 97.8% | 80.1% |
| 1gs5A00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.52 | 46.0 | 4.10e-01 | 94.0% | 100.0% |
| 2iw1A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 36.0 | 3.67e-01 | 100.0% | 69.4% |
| 4hyqA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.51 | 40.0 | 3.70e-01 | 83.2% | 98.3% |
| 1woqA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 34.0 | 3.75e-01 | 91.8% | 87.2% |
ECOD (95)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4408360 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 1.00 | 99.0 | 7.83e-01 | 100.0% | 57.5% |
| 3973572 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 1.00 | 99.0 | 7.90e-01 | 100.0% | 59.4% |
| 4275453 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.98 | 97.0 | 7.63e-01 | 100.0% | 57.8% |
| 4241086 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.98 | 96.0 | 7.46e-01 | 100.0% | 53.9% |
| 3249469 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.97 | 95.0 | 6.70e-01 | 100.0% | 40.9% |
| 4040836 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.97 | 94.0 | 7.45e-01 | 100.0% | 58.5% |
| 4600892 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.97 | 94.0 | 7.41e-01 | 100.0% | 57.9% |
| 3970530 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.96 | 94.0 | 7.42e-01 | 100.0% | 57.3% |
| 4445770 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.96 | 93.0 | 7.23e-01 | 100.0% | 54.6% |
| 4028591 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.95 | 92.0 | 6.99e-01 | 100.0% | 59.7% |
| 4513977 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.94 | 92.0 | 7.41e-01 | 100.0% | 58.7% |
| 2140850 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.94 | 90.0 | 8.43e-01 | 100.0% | 84.4% |
| 3938266 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.94 | 91.0 | 7.10e-01 | 100.0% | 66.1% |
| 3841032 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.94 | 91.0 | 7.00e-01 | 100.0% | 55.6% |
| 3739933 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.94 | 91.0 | 7.21e-01 | 100.0% | 63.0% |
| 3783296 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.93 | 91.0 | 7.01e-01 | 100.0% | 58.9% |
| 3470065 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.93 | 90.0 | 6.93e-01 | 100.0% | 55.9% |
| 3505575 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.93 | 90.0 | 6.85e-01 | 100.0% | 62.4% |
| 4475057 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.92 | 89.0 | 6.79e-01 | 100.0% | 58.1% |
| 4020291 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.92 | 89.0 | 6.79e-01 | 100.0% | 58.4% |
| 3697389 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.92 | 89.0 | 6.55e-01 | 100.0% | 58.8% |
| 4274340 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.92 | 89.0 | 7.11e-01 | 100.0% | 59.4% |
| 4467711 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.91 | 89.0 | 7.00e-01 | 100.0% | 55.5% |
| 5048102 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.87 | 80.0 | 6.40e-01 | 100.0% | 53.3% |
| 5012077 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.86 | 81.0 | 6.25e-01 | 100.0% | 49.4% |
| 4061943 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.86 | 81.0 | 6.38e-01 | 100.0% | 52.6% |
| 4979586 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.86 | 81.0 | 6.21e-01 | 100.0% | 49.0% |
| 4064994 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.86 | 81.0 | 6.43e-01 | 100.0% | 54.4% |
| 4013546 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.86 | 80.0 | 6.33e-01 | 100.0% | 52.6% |
| 3722941 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.85 | 80.0 | 6.26e-01 | 100.0% | 51.1% |
| 3997952 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.85 | 76.0 | 6.11e-01 | 100.0% | 52.3% |
| 5027513 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.84 | 77.0 | 6.45e-01 | 100.0% | 61.4% |
| 3993467 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.84 | 61.0 | 5.20e-01 | 100.0% | 50.4% |
| 5001337 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.84 | 78.0 | 5.98e-01 | 100.0% | 48.1% |
| 4967192 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.83 | 81.0 | 6.43e-01 | 100.0% | 56.6% |
| 4023690 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.83 | 79.0 | 6.06e-01 | 100.0% | 49.5% |
| 5079552 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.83 | 80.0 | 6.04e-01 | 100.0% | 51.4% |
| 3736527 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.82 | 78.0 | 6.20e-01 | 100.0% | 54.8% |
| 4037949 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.82 | 76.0 | 6.09e-01 | 100.0% | 53.8% |
| 387721 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.81 | 75.0 | 6.09e-01 | 100.0% | 55.8% |
| 4469624 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.81 | 77.0 | 6.08e-01 | 100.0% | 52.6% |
| 4001700 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.81 | 77.0 | 5.86e-01 | 100.0% | 48.3% |
| 3233553 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.80 | 74.0 | 5.76e-01 | 100.0% | 49.0% |
| 3651640 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.79 | 75.0 | 5.86e-01 | 100.0% | 53.3% |
| 4664989 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.79 | 74.0 | 5.89e-01 | 100.0% | 53.8% |
| 135810 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.77 | 72.0 | 5.55e-01 | 100.0% | 48.7% |
| 4879657 | 2005.1.1.21 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Pantoate_ligase | 0.74 | 64.0 | 6.28e-01 | 100.0% | 85.6% |
| 4458401 | 375.1.1.17 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1f | 0.73 | 69.0 | 5.94e-01 | 100.0% | 91.3% |
| 3602777 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.70 | 66.0 | 4.59e-01 | 100.0% | 44.2% |
| 4947783 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.70 | 67.0 | 5.40e-01 | 100.0% | 71.4% |
| 4079544 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.70 | 67.0 | 5.37e-01 | 100.0% | 71.8% |
| 4089572 | 239.1.1.17 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c | 0.70 | 67.0 | 5.10e-01 | 100.0% | 60.3% |
| 4422421 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.70 | 67.0 | 5.42e-01 | 100.0% | 70.9% |
| 4218545 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.70 | 67.0 | 5.37e-01 | 100.0% | 70.0% |
| None | — | 0.70 | 66.0 | 5.90e-01 | 100.0% | 98.8% | |
| 4626249 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.70 | 66.0 | 5.10e-01 | 100.0% | 60.4% |
| 4940443 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.70 | 66.0 | 5.01e-01 | 100.0% | 56.3% |
| 4602688 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.70 | 66.0 | 5.54e-01 | 100.0% | 76.9% |
| None | — | 0.70 | 66.0 | 4.76e-01 | 100.0% | 50.2% | |
| 4480232 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.70 | 66.0 | 5.51e-01 | 100.0% | 72.8% |
| 4260563 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.70 | 66.0 | 5.40e-01 | 100.0% | 71.7% |
| 4050304 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.69 | 66.0 | 5.22e-01 | 100.0% | 68.7% |
| None | — | 0.69 | 65.0 | 4.62e-01 | 98.4% | 49.8% | |
| 4417998 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.69 | 65.0 | 5.48e-01 | 100.0% | 78.3% |
| 4391812 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.69 | 65.0 | 4.66e-01 | 100.0% | 48.3% |
| 4076539 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.69 | 65.0 | 5.42e-01 | 100.0% | 71.4% |
| 4298869 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.69 | 65.0 | 4.70e-01 | 98.9% | 48.0% |
| None | — | 0.69 | 65.0 | 4.75e-01 | 100.0% | 49.9% | |
| None | — | 0.69 | 65.0 | 4.76e-01 | 100.0% | 52.7% | |
| None | — | 0.69 | 65.0 | 4.72e-01 | 100.0% | 48.9% | |
| 4062902 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.69 | 65.0 | 4.70e-01 | 100.0% | 49.0% |
| 4300539 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.69 | 65.0 | 5.51e-01 | 100.0% | 71.6% |
| 4662099 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.69 | 65.0 | 4.70e-01 | 100.0% | 51.1% |
| None | — | 0.69 | 65.0 | 4.74e-01 | 100.0% | 49.6% | |
| 4025786 | 101.8.1.5 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1c | 0.69 | 65.0 | 4.61e-01 | 100.0% | 47.2% |
| 4667949 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.68 | 65.0 | 5.52e-01 | 100.0% | 81.1% |
| 3507842 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.68 | 65.0 | 5.11e-01 | 100.0% | 68.9% |
| 4056782 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.68 | 64.0 | 4.55e-01 | 100.0% | 46.8% |
| 4629297 | 8002.1.1.1 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › tRNA-synt_1c | 0.68 | 63.0 | 5.24e-01 | 98.4% | 76.5% |
| 4348581 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.68 | 64.0 | 4.65e-01 | 100.0% | 48.9% |
| None | — | 0.68 | 64.0 | 4.64e-01 | 99.5% | 49.5% | |
| 4084568 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.68 | 64.0 | 5.16e-01 | 100.0% | 69.4% |
| None | — | 0.67 | 63.0 | 4.57e-01 | 98.4% | 48.1% | |
| 4999393 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.67 | 44.0 | 4.54e-01 | 99.5% | 68.6% |
| 4248349 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.67 | 63.0 | 5.14e-01 | 100.0% | 76.6% |
| 4994284 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.66 | 43.0 | 4.20e-01 | 100.0% | 59.5% |
| 5054969 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.66 | 55.0 | 5.27e-01 | 86.4% | 99.5% |
| 4970422 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.64 | 52.0 | 5.06e-01 | 84.8% | 98.0% |
| 3981866 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.64 | 51.0 | 5.46e-01 | 100.0% | 93.9% |
| 4944905 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.60 | 46.0 | 4.28e-01 | 99.5% | 62.6% |
| 3711667 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.56 | 51.0 | 5.18e-01 | 100.0% | 97.8% |
| 4977948 | 7545.1.1.1 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrE | 0.56 | 36.0 | 4.42e-01 | 85.3% | 100.0% |
| 4988973 | 7545.1.1.1 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrE | 0.56 | 36.0 | 4.35e-01 | 86.4% | 99.2% |
| 4194672 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.56 | 42.0 | 4.64e-01 | 100.0% | 96.0% |
| 408985 | 7512.1.1.24 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_5 | 0.54 | 43.0 | 4.06e-01 | 100.0% | 69.4% |
D2
high
residues 330-402
Domain cluster:
rep: NODE_14_length_293356_cov_397-335986_prodigal-single.1__X__X__00321__D368-446
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01479.31 best | S4 | 25.3 | 1.40e-05 | 60.3% | 87.5% |
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1h3eA03 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.88 | 72.0 | 7.18e-01 | 87.7% | 86.8% |
| 3dh3B01 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.83 | 63.0 | 6.90e-01 | 91.8% | 98.3% |
| 2janA03 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.83 | 76.0 | 6.81e-01 | 100.0% | 76.8% |
| 1vs5D02 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.80 | 61.0 | 5.58e-01 | 80.8% | 92.6% |
| 1vioA01 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.80 | 60.0 | 6.60e-01 | 91.8% | 100.0% |
| 2istA01 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.79 | 62.0 | 6.33e-01 | 89.0% | 84.7% |
| 5mmjd02 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.78 | 65.0 | 5.88e-01 | 89.0% | 92.8% |
| 1dm9A00 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.78 | 64.0 | 5.68e-01 | 89.0% | 63.5% |
| 1kskA01 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.76 | 59.0 | 6.14e-01 | 93.2% | 90.9% |
| 3kbgA01 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.74 | 63.0 | 6.11e-01 | 91.8% | 86.4% |
| 3hp7A01 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.73 | 60.0 | 6.31e-01 | 89.0% | 98.5% |
| 2q5wD00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.65 | 46.0 | 4.54e-01 | 89.0% | 70.1% |
| 1fm0D00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.63 | 47.0 | 4.60e-01 | 89.0% | 71.6% |
| 5gaeH01 | 3.10.430.100 | Alpha Beta › Roll › Ribosomal Protein L9; domain 2 › Ribosomal protein L9, C-terminal domain | 0.60 | 51.0 | 5.04e-01 | 100.0% | 89.7% |
| 2jpeA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.59 | 51.0 | 4.30e-01 | 100.0% | 73.5% |
| 1uhtA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.59 | 52.0 | 4.46e-01 | 100.0% | 81.4% |
| 3vpyA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.59 | 51.0 | 4.15e-01 | 100.0% | 76.6% |
| 2cswA01 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.59 | 52.0 | 4.34e-01 | 100.0% | 84.1% |
| 1g6gB00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.59 | 51.0 | 4.34e-01 | 100.0% | 89.5% |
| 3fm8A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.58 | 52.0 | 4.72e-01 | 100.0% | 95.9% |
| 1pm6A00 | 1.10.1660.20 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Excisionase (Xis) protein | 0.58 | 41.0 | 4.16e-01 | 78.1% | 76.4% |
| 6hbzA01 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.57 | 51.0 | 4.57e-01 | 100.0% | 92.2% |
| 4h87A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.57 | 49.0 | 4.22e-01 | 100.0% | 81.5% |
| 4jonC00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.57 | 49.0 | 4.26e-01 | 100.0% | 78.0% |
| 4k6nA02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.56 | 49.0 | 3.91e-01 | 100.0% | 91.5% |
| 1r21A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.56 | 49.0 | 4.48e-01 | 100.0% | 92.0% |
| 6hhuA01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 48.0 | 4.70e-01 | 98.6% | 100.0% |
| 1z9mA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 47.0 | 4.20e-01 | 100.0% | 87.5% |
| 2q7nA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 46.0 | 4.48e-01 | 100.0% | 92.6% |
| 3a5pA00 | 2.60.200.70 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.52 | 37.0 | 3.33e-01 | 94.5% | 53.4% |
| 4liqE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 4.17e-01 | 100.0% | 88.5% |
| 3ey7A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 35.0 | 3.00e-01 | 100.0% | 43.8% |
ECOD (97)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4655808 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.94 | 85.0 | 8.04e-01 | 100.0% | 82.1% |
| 4067726 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.94 | 89.0 | 8.39e-01 | 100.0% | 85.9% |
| 4068245 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.93 | 88.0 | 8.30e-01 | 100.0% | 85.7% |
| 4424496 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.93 | 87.0 | 8.64e-01 | 100.0% | 96.0% |
| 4225898 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.92 | 86.0 | 8.10e-01 | 100.0% | 84.7% |
| 4649306 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.92 | 85.0 | 8.26e-01 | 100.0% | 90.0% |
| 4311996 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.92 | 81.0 | 8.08e-01 | 100.0% | 91.9% |
| 4097247 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.90 | 83.0 | 8.08e-01 | 100.0% | 90.0% |
| 4513460 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.90 | 84.0 | 7.96e-01 | 100.0% | 88.2% |
| 4069286 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.90 | 78.0 | 8.00e-01 | 97.3% | 95.7% |
| 4371983 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.89 | 83.0 | 8.08e-01 | 100.0% | 95.0% |
| 4594972 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.89 | 82.0 | 7.55e-01 | 98.6% | 85.6% |
| 4579240 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.88 | 83.0 | 7.66e-01 | 100.0% | 89.9% |
| 4681372 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.88 | 82.0 | 7.96e-01 | 100.0% | 96.2% |
| 4563326 | 221.1.2.15 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4, SYY_C-terminal | 0.88 | 82.0 | 7.55e-01 | 98.6% | 82.2% |
| 4114172 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.88 | 82.0 | 7.89e-01 | 98.6% | 97.5% |
| 4296239 | 221.1.2.15 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4, SYY_C-terminal | 0.88 | 81.0 | 7.88e-01 | 98.6% | 97.5% |
| 4664945 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.88 | 82.0 | 7.90e-01 | 100.0% | 97.5% |
| 3838526 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.88 | 76.0 | 7.79e-01 | 98.6% | 97.1% |
| 4637141 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.88 | 82.0 | 7.55e-01 | 100.0% | 83.3% |
| 4500894 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.87 | 80.0 | 7.80e-01 | 100.0% | 97.5% |
| 4086120 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.86 | 80.0 | 7.56e-01 | 100.0% | 92.9% |
| 4339810 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.86 | 80.0 | 7.71e-01 | 100.0% | 97.5% |
| 4326986 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.86 | 78.0 | 7.36e-01 | 97.3% | 85.9% |
| 4105602 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.86 | 78.0 | 7.61e-01 | 100.0% | 96.2% |
| 4098489 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.86 | 79.0 | 7.20e-01 | 100.0% | 83.2% |
| 4385812 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.86 | 80.0 | 6.99e-01 | 100.0% | 80.8% |
| 4449295 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.86 | 65.0 | 6.81e-01 | 84.9% | 89.2% |
| 4552602 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.85 | 78.0 | 7.52e-01 | 98.6% | 97.5% |
| 4479416 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.85 | 77.0 | 7.44e-01 | 100.0% | 88.7% |
| 4348982 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.85 | 77.0 | 7.72e-01 | 100.0% | 97.3% |
| 4258424 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.85 | 79.0 | 7.86e-01 | 100.0% | 98.6% |
| 4020806 | 221.1.2.9 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › TyrRSs_C | 0.85 | 78.0 | 6.62e-01 | 100.0% | 85.2% |
| 4639963 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.84 | 78.0 | 6.95e-01 | 100.0% | 80.0% |
| 4021499 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.84 | 78.0 | 6.60e-01 | 100.0% | 85.2% |
| 4650909 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.84 | 78.0 | 7.56e-01 | 100.0% | 98.8% |
| 3389276 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.84 | 78.0 | 7.11e-01 | 100.0% | 81.9% |
| 4212369 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.84 | 79.0 | 7.61e-01 | 100.0% | 97.5% |
| 3839445 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.84 | 61.0 | 6.86e-01 | 80.8% | 100.0% |
| 5023885 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.84 | 67.0 | 7.06e-01 | 93.2% | 95.4% |
| 4989485 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.84 | 59.0 | 6.43e-01 | 74.0% | 88.3% |
| 3957594 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.84 | 58.0 | 5.45e-01 | 72.6% | 61.2% |
| 4381886 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.83 | 78.0 | 7.05e-01 | 100.0% | 76.8% |
| 4415510 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.83 | 77.0 | 7.26e-01 | 100.0% | 94.1% |
| 4354435 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.83 | 77.0 | 7.69e-01 | 100.0% | 98.6% |
| 4209983 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.83 | 78.0 | 6.90e-01 | 100.0% | 74.0% |
| 4233759 | 221.1.2.15 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4, SYY_C-terminal | 0.83 | 77.0 | 6.94e-01 | 100.0% | 75.8% |
| 4039647 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.82 | 74.0 | 6.64e-01 | 98.6% | 77.0% |
| 4179975 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.82 | 76.0 | 7.46e-01 | 100.0% | 96.2% |
| 3363592 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.82 | 58.0 | 6.64e-01 | 75.3% | 98.2% |
| 4474817 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.82 | 76.0 | 7.18e-01 | 100.0% | 91.8% |
| 3945814 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.82 | 63.0 | 6.61e-01 | 90.4% | 90.8% |
| 4173735 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.82 | 72.0 | 7.22e-01 | 97.3% | 97.3% |
| 4037359 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.81 | 75.0 | 6.71e-01 | 100.0% | 75.0% |
| 4230087 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.81 | 73.0 | 6.64e-01 | 97.3% | 76.8% |
| 3989121 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.81 | 64.0 | 5.97e-01 | 83.6% | 70.5% |
| 3505558 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.81 | 74.0 | 7.05e-01 | 100.0% | 91.8% |
| 3587989 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.81 | 61.0 | 6.45e-01 | 89.0% | 89.2% |
| 4178101 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.80 | 73.0 | 6.97e-01 | 100.0% | 87.1% |
| 1919543 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.80 | 59.0 | 6.02e-01 | 78.1% | 85.9% |
| 3977788 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.79 | 63.0 | 6.25e-01 | 89.0% | 81.3% |
| 3587422 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.79 | 57.0 | 6.41e-01 | 78.1% | 100.0% |
| 3681441 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.79 | 63.0 | 6.29e-01 | 93.2% | 82.7% |
| 1118566 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.79 | 62.0 | 6.54e-01 | 86.3% | 93.8% |
| 3971609 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.79 | 71.0 | 7.09e-01 | 100.0% | 100.0% |
| 4589076 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.79 | 62.0 | 6.17e-01 | 91.8% | 81.3% |
| 4211461 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.78 | 70.0 | 7.01e-01 | 100.0% | 100.0% |
| 5030257 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.78 | 64.0 | 4.64e-01 | 86.3% | 42.7% |
| 6217 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.78 | 64.0 | 5.68e-01 | 89.0% | 63.5% |
| 4610806 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.78 | 66.0 | 4.97e-01 | 91.8% | 56.5% |
| 3964567 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.78 | 61.0 | 6.09e-01 | 90.4% | 81.3% |
| 3291005 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.77 | 59.0 | 6.01e-01 | 89.0% | 84.3% |
| 3954326 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.76 | 59.0 | 6.03e-01 | 90.4% | 85.7% |
| 4148940 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.76 | 59.0 | 6.03e-01 | 90.4% | 85.7% |
| 3949525 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.76 | 59.0 | 6.36e-01 | 90.4% | 100.0% |
| 3281433 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.76 | 53.0 | 5.04e-01 | 72.6% | 62.4% |
| 4832866 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.75 | 59.0 | 4.95e-01 | 83.6% | 54.2% |
| 3587128 | 221.1.2.8 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4_2 | 0.74 | 61.0 | 6.26e-01 | 97.3% | 94.3% |
| 4653737 | 221.1.2.10 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › SYY_C-terminal | 0.73 | 65.0 | 6.23e-01 | 100.0% | 85.9% |
| 4343727 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.73 | 61.0 | 6.23e-01 | 90.4% | 95.7% |
| 3785267 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.73 | 56.0 | 5.64e-01 | 90.4% | 81.3% |
| 4512477 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.72 | 61.0 | 5.31e-01 | 93.2% | 84.5% |
| 3177294 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.71 | 55.0 | 4.83e-01 | 91.8% | 55.5% |
| 3595231 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.71 | 57.0 | 5.86e-01 | 90.4% | 91.4% |
| 4235301 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.71 | 56.0 | 5.83e-01 | 91.8% | 95.4% |
| 3838530 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.71 | 49.0 | 5.33e-01 | 87.7% | 88.3% |
| 3678044 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.71 | 55.0 | 5.05e-01 | 90.4% | 64.2% |
| 3802847 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.70 | 57.0 | 5.67e-01 | 90.4% | 86.7% |
| 3261909 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.70 | 53.0 | 5.11e-01 | 91.8% | 71.8% |
| 3982809 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.69 | 53.0 | 5.32e-01 | 91.8% | 81.3% |
| 4134995 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.68 | 52.0 | 5.22e-01 | 91.8% | 81.3% |
| 3757925 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.67 | 52.0 | 4.77e-01 | 90.4% | 65.3% |
| 3996024 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.58 | 50.0 | 4.08e-01 | 100.0% | 73.3% |
| 3500008 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.57 | 49.0 | 4.02e-01 | 100.0% | 67.8% |
| 3882303 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.57 | 48.0 | 4.04e-01 | 100.0% | 75.7% |
| 3828620 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.56 | 48.0 | 4.05e-01 | 100.0% | 88.1% |
| 3581758 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.56 | 48.0 | 3.79e-01 | 100.0% | 62.4% |
D3
medium
residues 242-315
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00579.32 best | tRNA-synt_1b | 27.6 | 2.50e-06 | 100.0% | 23.6% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2janA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.89 | 82.0 | 7.28e-01 | 98.6% | 73.3% |
| 4ojmX02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.87 | 81.0 | 7.12e-01 | 100.0% | 75.2% |
| 1h3fA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.84 | 77.0 | 6.45e-01 | 97.3% | 82.1% |
| 2el7A02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.81 | 65.0 | 5.96e-01 | 85.1% | 68.1% |
| 3hzrA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.80 | 63.0 | 5.50e-01 | 85.1% | 73.9% |
| 2of5H00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.70 | 53.0 | 4.86e-01 | 85.1% | 61.0% |
| 1fadA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.65 | 49.0 | 4.62e-01 | 83.8% | 66.3% |
| 5xnyA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.65 | 45.0 | 3.98e-01 | 97.3% | 49.5% |
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.62 | 36.0 | 3.12e-01 | 100.0% | 36.2% |
| 7dniB01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.61 | 45.0 | 4.33e-01 | 82.4% | 70.8% |
| 2p0tA02 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.60 | 48.0 | 4.87e-01 | 89.2% | 100.0% |
| 1ichA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.58 | 51.0 | 4.85e-01 | 97.3% | 98.9% |
| 3tjmA02 | 1.10.1470.20 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 | 0.58 | 40.0 | 3.84e-01 | 81.1% | 60.0% |
| 2yxlA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.58 | 50.0 | 4.05e-01 | 100.0% | 70.4% |
| 2qgaB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.58 | 41.0 | 3.63e-01 | 94.6% | 49.1% |
| 2mpcA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.58 | 44.0 | 4.18e-01 | 85.1% | 67.8% |
| 1owlA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 44.0 | 3.81e-01 | 85.1% | 84.6% |
| 7e4mA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 41.0 | 2.86e-01 | 81.1% | 41.4% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 41.0 | 4.04e-01 | 97.3% | 77.2% |
| 1u61A00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.52 | 45.0 | 3.79e-01 | 97.3% | 92.1% |
| 1t3dA01 | 1.10.3130.10 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 | 0.51 | 41.0 | 3.39e-01 | 89.2% | 62.9% |
| 3cyfA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.51 | 45.0 | 3.37e-01 | 98.6% | 98.4% |
| 7qihA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 39.0 | 3.49e-01 | 81.1% | 59.4% |
| 8sbeA01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.51 | 39.0 | 2.97e-01 | 85.1% | 52.6% |
| 3tc1B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.50 | 37.0 | 2.58e-01 | 83.8% | 22.6% |
| 1bqbA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.50 | 39.0 | 3.18e-01 | 85.1% | 96.5% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4408360 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.95 | 91.0 | 5.68e-01 | 100.0% | 23.4% |
| 4274340 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.93 | 88.0 | 5.53e-01 | 100.0% | 23.1% |
| 4600892 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.91 | 85.0 | 5.34e-01 | 100.0% | 22.1% |
| 3841032 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.90 | 84.0 | 5.23e-01 | 100.0% | 20.6% |
| 3249469 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.90 | 84.0 | 5.00e-01 | 100.0% | 15.9% |
| 3938266 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.89 | 83.0 | 5.22e-01 | 100.0% | 21.4% |
| 3993467 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.89 | 83.0 | 5.46e-01 | 100.0% | 27.4% |
| 4445770 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.89 | 83.0 | 5.19e-01 | 100.0% | 22.0% |
| 4020291 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.89 | 82.0 | 5.06e-01 | 98.6% | 19.7% |
| 4467711 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.89 | 82.0 | 5.19e-01 | 100.0% | 22.1% |
| 3697389 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.88 | 83.0 | 5.01e-01 | 100.0% | 18.6% |
| 3505575 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.88 | 82.0 | 5.04e-01 | 100.0% | 19.7% |
| 4475057 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.87 | 81.0 | 5.01e-01 | 100.0% | 19.7% |
| 4275453 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.86 | 75.0 | 4.72e-01 | 100.0% | 20.9% |
| 3783296 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.86 | 80.0 | 4.99e-01 | 100.0% | 22.0% |
| 4040836 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.86 | 80.0 | 5.05e-01 | 100.0% | 22.7% |
| 3970530 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.86 | 80.0 | 5.05e-01 | 100.0% | 22.7% |
| 3431353 | 1128.1.1.10 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › VIN3_C | 0.64 | 43.0 | 4.46e-01 | 70.3% | 81.4% |
| 3916937 | 110.1.1.1 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death | 0.62 | 47.0 | 4.20e-01 | 83.8% | 58.1% |
| 3651135 | 3788.1.1.20 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › VIN3_C | 0.60 | 42.0 | 4.22e-01 | 74.3% | 80.0% |
| 3961048 | 4953.1.1.7 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › AI-2E_transport | 0.59 | 41.0 | 3.87e-01 | 71.6% | 64.4% |
| 3232655 | 5079.1.1.1 ↗ | alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE | 0.58 | 45.0 | 3.33e-01 | 85.1% | 62.9% |
| 5003920 | 5079.1.1.1 ↗ | alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE | 0.58 | 44.0 | 3.43e-01 | 85.1% | 76.7% |
| 3544840 | 110.1.1.1 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death | 0.56 | 48.0 | 4.43e-01 | 98.6% | 88.0% |
| 4028136 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.54 | 35.0 | 3.73e-01 | 100.0% | 76.9% |
| 3387144 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.51 | 45.0 | 3.09e-01 | 100.0% | 76.7% |