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CAKLQF020000030.1__CAH1093836.1__SAMEA5780031_03757__00001

Bact-Vir

CAKLQF020000030.1__CAH1093836.1__SAMEA5780031_03757__00001

Identity

Kingdom:
phage

Quality

75.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-46
PDB
Domain cluster: representative
CATH (90)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 78.0 6.65e-01 100.0% 74.2%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 78.0 6.62e-01 100.0% 62.1%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.86 76.0 5.28e-01 100.0% 33.6%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 73.0 6.64e-01 95.1% 70.9%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.85 75.0 6.31e-01 100.0% 69.1%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 71.0 6.47e-01 100.0% 71.4%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 72.0 6.20e-01 100.0% 61.2%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 72.0 6.56e-01 100.0% 73.2%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 70.0 6.20e-01 100.0% 66.7%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 71.0 6.23e-01 100.0% 65.1%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 69.0 6.76e-01 100.0% 86.7%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 65.0 6.01e-01 92.7% 68.5%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 71.0 5.35e-01 100.0% 41.4%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.82 71.0 5.36e-01 100.0% 41.6%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 70.0 6.59e-01 100.0% 82.7%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 69.0 6.27e-01 100.0% 70.7%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 69.0 5.87e-01 100.0% 56.9%
6g1dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 68.0 5.51e-01 100.0% 48.8%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 66.0 5.23e-01 100.0% 43.8%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 70.0 5.46e-01 100.0% 45.6%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 6.35e-01 100.0% 79.6%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 66.0 5.79e-01 100.0% 60.6%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 71.0 5.48e-01 100.0% 46.1%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.80 67.0 4.29e-01 100.0% 19.9%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 5.71e-01 100.0% 69.0%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 67.0 6.34e-01 100.0% 78.4%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 65.0 5.31e-01 100.0% 48.8%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 5.49e-01 100.0% 51.2%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 65.0 6.44e-01 97.6% 95.5%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 5.30e-01 100.0% 47.1%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 65.0 6.11e-01 100.0% 77.8%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 64.0 5.45e-01 95.1% 60.0%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 63.0 5.99e-01 95.1% 82.0%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.78 68.0 5.05e-01 100.0% 88.3%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 5.46e-01 100.0% 54.7%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 5.85e-01 100.0% 68.9%
1qb2A00 1.10.260.30 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain 0.78 67.0 4.98e-01 100.0% 52.8%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 5.50e-01 100.0% 65.3%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.77 61.0 4.14e-01 90.2% 54.2%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 63.0 6.32e-01 100.0% 97.6%
3h4cA02 1.10.472.110 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.77 63.0 4.74e-01 97.6% 47.3%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.77 65.0 5.94e-01 97.6% 75.0%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 5.99e-01 100.0% 86.0%
2hinA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 58.0 4.95e-01 82.9% 51.5%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 65.0 5.77e-01 97.6% 77.0%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.68e-01 100.0% 68.8%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 5.64e-01 100.0% 68.3%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 5.64e-01 100.0% 67.2%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.63e-01 100.0% 62.1%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 5.60e-01 100.0% 66.7%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 5.27e-01 100.0% 53.9%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 5.15e-01 100.0% 52.5%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 4.51e-01 100.0% 34.7%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.74 59.0 4.55e-01 100.0% 37.6%
2lvsA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 62.0 5.91e-01 97.6% 81.6%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.32e-01 100.0% 59.7%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 5.11e-01 100.0% 65.5%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 5.83e-01 100.0% 83.7%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.74 66.0 5.27e-01 100.0% 86.1%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 4.68e-01 100.0% 41.3%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 4.41e-01 100.0% 32.6%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.40e-01 97.6% 72.3%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 4.80e-01 100.0% 52.8%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.73 60.0 4.40e-01 100.0% 32.5%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 4.20e-01 100.0% 31.2%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 61.0 5.14e-01 97.6% 64.8%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 5.27e-01 100.0% 64.2%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 4.28e-01 100.0% 34.9%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 4.15e-01 100.0% 30.5%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 4.63e-01 100.0% 45.2%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 4.05e-01 100.0% 28.5%
8amzO01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.71 58.0 3.46e-01 100.0% 13.8%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 4.96e-01 100.0% 60.3%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 4.79e-01 100.0% 51.2%
3r4kB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 5.23e-01 100.0% 68.3%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 58.0 5.68e-01 100.0% 97.9%
2di3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 4.97e-01 100.0% 66.7%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 4.89e-01 100.0% 68.2%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 4.88e-01 100.0% 72.0%
3cjdA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 57.0 3.77e-01 97.6% 58.8%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 4.68e-01 100.0% 53.1%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 4.42e-01 100.0% 45.7%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 55.0 4.64e-01 100.0% 67.5%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 3.90e-01 100.0% 29.5%
1ft9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 4.61e-01 100.0% 69.6%
1g2hA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 53.0 4.81e-01 95.1% 72.1%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 4.41e-01 100.0% 50.0%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 54.0 3.94e-01 100.0% 38.7%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 4.60e-01 100.0% 62.3%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 49.0 4.43e-01 100.0% 89.7%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3990025 101.1.1.118 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_IS630 0.99 93.0 7.95e-01 100.0% 68.3%
5017723 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 88.0 7.02e-01 100.0% 54.7%
5080109 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.94 84.0 6.80e-01 100.0% 54.7%
3983656 101.1.6.14 alpha arrays › HTH › HTH › TrpR › HTH_29 0.94 85.0 7.16e-01 100.0% 63.1%
4976345 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.93 85.0 7.39e-01 100.0% 68.3%
5025805 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.92 78.0 7.08e-01 95.1% 70.9%
4957415 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.91 81.0 7.08e-01 100.0% 68.3%
4946254 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 79.0 7.70e-01 97.6% 88.9%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.90 81.0 7.88e-01 100.0% 91.1%
3904156 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 78.0 7.63e-01 97.6% 88.9%
4460997 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.90 78.0 7.59e-01 97.6% 91.1%
3935816 4156.1.1.5 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › POLQ_helical 0.90 79.0 5.20e-01 100.0% 25.6%
4060647 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.89 79.0 6.74e-01 100.0% 64.6%
3879118 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.89 79.0 7.14e-01 100.0% 74.5%
3565285 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.89 79.0 6.67e-01 100.0% 61.5%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 78.0 7.09e-01 100.0% 74.5%
3589184 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 73.0 5.96e-01 92.7% 50.7%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.88 77.0 6.30e-01 100.0% 54.7%
3789627 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 78.0 6.64e-01 100.0% 63.1%
4952035 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.88 75.0 6.57e-01 95.1% 65.0%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.88 77.0 6.78e-01 100.0% 68.3%
3590732 101.1.1.364 alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 0.88 76.0 7.46e-01 100.0% 91.1%
5018585 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.88 75.0 6.80e-01 100.0% 70.9%
4985590 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.88 75.0 7.58e-01 97.6% 100.0%
3942514 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.88 79.0 7.36e-01 100.0% 84.0%
3394867 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.88 75.0 6.16e-01 100.0% 53.3%
4010213 101.1.1.218 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_IS1 0.87 76.0 7.14e-01 100.0% 80.0%
5063318 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.87 75.0 6.81e-01 97.6% 72.7%
3589664 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.87 77.0 6.03e-01 100.0% 48.2%
4927434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 76.0 7.38e-01 97.6% 88.9%
3977377 101.1.2.836 alpha arrays › HTH › HTH › winged helix domain › Terminase_5 0.87 72.0 5.30e-01 92.7% 36.2%
4159688 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.87 76.0 6.37e-01 100.0% 58.6%
5006645 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.87 77.0 6.74e-01 100.0% 68.3%
3283604 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.86 75.0 5.64e-01 100.0% 43.0%
3946548 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.86 74.0 5.78e-01 100.0% 45.6%
3210747 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.86 73.0 7.12e-01 95.1% 86.7%
4955713 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 75.0 6.46e-01 100.0% 63.1%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.86 73.0 6.90e-01 97.6% 80.0%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.86 73.0 6.07e-01 95.1% 54.9%
5020571 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.86 74.0 5.50e-01 100.0% 39.0%
3946793 101.1.1.259 alpha arrays › HTH › HTH › Three-helical HTH › Terminase_5 0.86 72.0 5.18e-01 95.1% 33.9%
4002185 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.86 73.0 6.01e-01 100.0% 53.3%
5014141 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.85 72.0 6.75e-01 95.1% 78.0%
4031672 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.85 74.0 5.95e-01 100.0% 51.2%
4990647 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 70.0 6.46e-01 95.1% 70.9%
5003692 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.85 73.0 6.33e-01 100.0% 63.1%
5074931 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 74.0 5.68e-01 97.6% 47.8%
3988724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 73.0 6.50e-01 100.0% 68.3%
3589359 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.85 68.0 6.88e-01 90.2% 92.5%
3411416 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 72.0 7.12e-01 97.6% 90.9%
3988145 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.85 71.0 6.68e-01 100.0% 78.0%
3983783 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.85 73.0 5.60e-01 100.0% 45.3%
3753093 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.85 72.0 6.23e-01 100.0% 61.5%
5041148 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 71.0 5.99e-01 97.6% 60.0%
3959738 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 72.0 5.53e-01 100.0% 44.2%
5014584 101.1.2.932 alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.84 71.0 5.61e-01 97.6% 49.4%
5016985 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 69.0 6.79e-01 95.1% 86.7%
3280379 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.84 72.0 5.45e-01 100.0% 41.0%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.84 71.0 6.29e-01 97.6% 66.7%
3997733 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 72.0 6.25e-01 100.0% 63.1%
3857628 101.1.3.29 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › CENP-B_N 0.83 71.0 6.13e-01 100.0% 61.5%
4992594 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 70.0 6.85e-01 97.6% 88.9%
3589152 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 68.0 6.70e-01 95.1% 86.7%
4031116 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 71.0 6.35e-01 100.0% 68.3%
2441957 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.83 72.0 5.58e-01 100.0% 46.7%
3985633 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.83 71.0 6.50e-01 100.0% 81.8%
3933366 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.82 71.0 6.01e-01 100.0% 58.6%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 68.0 6.51e-01 97.6% 80.0%
5004841 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 67.0 5.85e-01 95.1% 60.0%
3942028 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.82 71.0 5.53e-01 100.0% 46.7%
3942478 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 71.0 6.48e-01 100.0% 74.5%
3283589 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.82 67.0 6.34e-01 95.1% 78.0%
4008959 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 67.0 6.12e-01 95.1% 69.1%
3286659 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 69.0 5.90e-01 100.0% 58.6%
3287536 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 69.0 6.81e-01 100.0% 91.1%
5002651 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 68.0 5.30e-01 100.0% 45.3%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.81 67.0 6.23e-01 100.0% 74.5%
4031756 101.1.2.645 alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.81 68.0 5.47e-01 100.0% 48.2%
3975152 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.81 67.0 5.34e-01 100.0% 45.6%
4939633 101.1.2.932 alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.81 68.0 6.00e-01 100.0% 66.7%
4984738 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 65.0 6.42e-01 95.1% 88.9%
3976103 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.80 67.0 5.89e-01 100.0% 63.1%
5013090 304.4.1.83 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › HTH_24 0.80 69.0 4.49e-01 100.0% 23.9%
5021422 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 67.0 5.88e-01 100.0% 64.6%
5053505 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.80 69.0 6.48e-01 97.6% 86.0%
4987653 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.80 68.0 6.71e-01 100.0% 91.1%
5002796 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 68.0 5.91e-01 100.0% 64.6%
3967284 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 64.0 5.73e-01 92.7% 68.3%
4061265 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.79 64.0 4.36e-01 97.6% 25.0%
4952293 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.79 65.0 6.57e-01 95.1% 97.5%
2792505 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.78 66.0 6.04e-01 100.0% 71.9%
3284225 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.78 65.0 5.39e-01 100.0% 51.2%
4350608 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 64.0 6.29e-01 100.0% 97.8%
3968886 101.1.1.77 alpha arrays › HTH › HTH › Three-helical HTH › HTH_50 0.76 62.0 5.42e-01 95.1% 63.1%
4031535 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.76 61.0 5.61e-01 100.0% 68.3%
4964802 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 62.0 5.56e-01 100.0% 66.7%
5030780 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.74 59.0 5.74e-01 100.0% 82.0%
3391053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 55.0 5.52e-01 100.0% 91.1%
3410877 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 55.0 4.86e-01 100.0% 64.3%
D2 high residues 66-108
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 5.77e-01 100.0% 66.7%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 4.80e-01 100.0% 54.8%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 4.91e-01 100.0% 57.3%
1u84A00 1.10.340.20 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain 0.68 54.0 4.56e-01 95.3% 70.4%
3gz5B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 51.0 4.50e-01 93.0% 55.4%
3td9A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 51.0 3.40e-01 100.0% 66.3%
5yjlD01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 50.0 3.54e-01 95.3% 67.6%
3ugjA02 1.10.8.750 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Phosphoribosylformylglycinamidine synthase, linker domain 0.60 45.0 4.13e-01 95.3% 59.7%
3me5A01 1.10.260.140 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › 0.60 48.0 4.37e-01 95.3% 64.1%
2hszA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.59 46.0 4.08e-01 100.0% 89.3%
2hzdA00 6.10.20.40 Special › Helix non-globular › Arc Repressor Mutant, subunit A › TEA/ATTS domain 0.59 48.0 4.08e-01 100.0% 70.7%
1ds8M02 1.20.85.10 Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like 0.56 44.0 3.22e-01 100.0% 39.2%
3ilkA02 1.10.8.590 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.56 38.0 3.30e-01 88.4% 45.6%
2km6A00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.55 38.0 3.16e-01 81.4% 77.1%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3487537 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 71.0 6.80e-01 100.0% 82.0%
4031678 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.83 71.0 6.25e-01 100.0% 66.2%
3504389 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 69.0 5.70e-01 100.0% 60.0%
3706618 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.81 67.0 5.60e-01 95.3% 61.3%
3715143 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 69.0 5.67e-01 100.0% 60.0%
5008720 101.1.1.548 alpha arrays › HTH › HTH › Three-helical HTH › HTH_32 0.80 69.0 6.06e-01 100.0% 66.2%
3620979 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 69.0 6.39e-01 100.0% 87.3%
3632862 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 69.0 5.12e-01 100.0% 39.1%
5021354 101.1.2.619 alpha arrays › HTH › HTH › winged helix domain › HTH_33 0.79 68.0 6.03e-01 100.0% 70.8%
3997947 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 67.0 6.47e-01 97.7% 94.0%
5052263 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 67.0 5.69e-01 100.0% 82.7%
3787144 101.1.1.8 alpha arrays › HTH › HTH › Three-helical HTH › TEA 0.79 67.0 5.66e-01 100.0% 80.0%
5057164 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 66.0 5.15e-01 100.0% 47.0%
4978898 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 66.0 6.55e-01 100.0% 93.3%
5073138 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 66.0 4.93e-01 100.0% 40.0%
5003693 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 67.0 5.94e-01 100.0% 66.2%
4014609 101.1.1.79 alpha arrays › HTH › HTH › Three-helical HTH › HTH_ABP1_N 0.78 67.0 5.89e-01 100.0% 70.8%
5007660 101.1.1.187 alpha arrays › HTH › HTH › Three-helical HTH › HTH_33 0.78 66.0 5.85e-01 100.0% 66.2%
3448615 101.1.1.121 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.77 64.0 5.02e-01 100.0% 60.0%
5017698 101.1.1.187 alpha arrays › HTH › HTH › Three-helical HTH › HTH_33 0.77 65.0 5.77e-01 100.0% 84.6%
5056734 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 64.0 4.81e-01 100.0% 40.9%
4952808 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 64.0 6.04e-01 100.0% 78.2%
4965088 101.1.2.909 alpha arrays › HTH › HTH › winged helix domain › DUF5797 0.76 65.0 5.31e-01 100.0% 52.9%
3738343 101.1.1.79 alpha arrays › HTH › HTH › Three-helical HTH › HTH_ABP1_N 0.76 65.0 5.92e-01 100.0% 76.7%
3618386 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 61.0 6.06e-01 93.0% 97.8%
4928394 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 63.0 5.62e-01 100.0% 69.7%
5070167 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 63.0 5.93e-01 100.0% 78.2%
4966213 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 62.0 5.59e-01 100.0% 72.3%
3625015 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 65.0 5.43e-01 100.0% 68.0%
5023957 101.1.2.280 alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.74 61.0 5.18e-01 100.0% 55.0%
4631918 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 60.0 5.21e-01 100.0% 57.3%
3455407 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 59.0 5.61e-01 100.0% 76.4%
4926838 101.43.1.0 alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain 0.73 61.0 5.44e-01 100.0% 78.5%
3366917 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.72 60.0 5.68e-01 100.0% 81.8%
4187720 206.1.3.2 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GARS_A 0.72 63.0 3.83e-01 97.7% 34.2%
4486248 3586.1.1.0 alpha arrays › Protelomerase stirrup domain › Protelomerase stirrup domain › Protelomerase stirrup domain 0.71 57.0 5.00e-01 100.0% 72.0%
3193553 101.1.2.212 alpha arrays › HTH › HTH › winged helix domain › Cac1_C 0.71 60.0 5.32e-01 100.0% 66.2%
3619546 3712.1.1.0 a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 0.69 48.0 4.24e-01 74.4% 49.2%
3955434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 57.0 5.50e-01 100.0% 86.0%
3226739 2004.1.1.50 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin 0.68 56.0 3.70e-01 97.7% 69.7%
4958195 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 54.0 5.19e-01 100.0% 81.8%
4891089 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.65 50.0 4.62e-01 88.4% 78.9%
3716814 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.55 37.0 3.67e-01 72.1% 62.0%