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CAKLQF020000030.1__CAH1093839.1__SAMEA5780031_03758__00002

Bact-Vir

CAKLQF020000030.1__CAH1093839.1__SAMEA5780031_03758__00002

Identity

Kingdom:
phage

Quality

88.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-104
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gziA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.72 51.0 3.79e-01 83.7% 31.0%
2dt5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 51.0 5.46e-01 76.7% 100.0%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 43.0 5.13e-01 70.9% 96.5%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 48.0 4.18e-01 84.9% 66.7%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 43.0 3.73e-01 79.1% 72.3%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.58 40.0 4.22e-01 74.4% 84.6%
7vwtA01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.56 47.0 3.35e-01 100.0% 51.1%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 46.0 3.83e-01 96.5% 63.4%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 46.0 4.02e-01 98.8% 66.4%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 41.0 3.67e-01 90.7% 70.0%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4132207 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.65 50.0 4.14e-01 80.2% 65.5%
4238054 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.61 44.0 3.12e-01 79.1% 26.1%
3676572 142.1.1.3 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.61 41.0 3.27e-01 74.4% 33.7%
3286793 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.60 53.0 4.53e-01 98.8% 74.3%
4618102 101.11.1.1 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.58 37.0 3.84e-01 70.9% 68.8%
4284032 109.4.1.1696 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29070 0.58 48.0 3.60e-01 90.7% 48.4%
4032673 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.57 45.0 3.20e-01 83.7% 29.8%
3282102 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.54 47.0 3.95e-01 97.7% 67.3%
3330762 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.51 40.0 3.63e-01 84.9% 81.7%
D2 high residues 111-176
PDB
Domain cluster: representative
CATH (87)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3boqA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 63.0 4.97e-01 100.0% 41.5%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 4.86e-01 100.0% 41.7%
2pexA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 63.0 4.90e-01 100.0% 41.2%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 62.0 5.50e-01 100.0% 60.0%
2fbkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 4.81e-01 100.0% 37.8%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 63.0 5.00e-01 100.0% 45.0%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 71.0 6.44e-01 100.0% 82.8%
2ia2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 61.0 6.08e-01 100.0% 83.8%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 4.73e-01 100.0% 41.3%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 5.48e-01 100.0% 63.3%
1y0uA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 58.0 5.21e-01 100.0% 60.7%
1lvaA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 6.33e-01 100.0% 96.7%
1in4A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 5.98e-01 100.0% 82.2%
2g9wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 6.12e-01 95.5% 89.6%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.74 64.0 4.42e-01 100.0% 28.8%
3kfwX01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 6.05e-01 100.0% 84.0%
2qm3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 5.14e-01 100.0% 63.9%
4gcvC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 4.50e-01 100.0% 40.4%
3dp7B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.25e-01 100.0% 63.4%
1mw9X02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.72 65.0 4.82e-01 100.0% 40.5%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 64.0 5.61e-01 100.0% 73.5%
2pjpA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 6.00e-01 100.0% 96.7%
1i7dA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.72 64.0 4.65e-01 100.0% 46.7%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 4.37e-01 100.0% 37.7%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 64.0 5.48e-01 100.0% 63.8%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 5.17e-01 100.0% 66.3%
3dpuA03 1.10.10.2200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.71 62.0 5.98e-01 98.5% 85.3%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 5.15e-01 100.0% 65.2%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 4.71e-01 98.5% 47.6%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 5.92e-01 100.0% 86.7%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.71 62.0 4.69e-01 100.0% 41.7%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 5.48e-01 100.0% 85.1%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 4.63e-01 100.0% 46.5%
2nriB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 5.48e-01 100.0% 70.7%
4yiiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.86e-01 95.5% 94.4%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 5.84e-01 100.0% 84.6%
3mq0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 54.0 5.19e-01 100.0% 74.0%
2do7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 5.80e-01 100.0% 82.5%
2vlaA03 1.10.10.2090 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.69 62.0 5.07e-01 100.0% 83.3%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 62.0 5.54e-01 100.0% 72.8%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 61.0 5.82e-01 100.0% 85.7%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 60.0 5.54e-01 100.0% 84.9%
3b02A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 5.54e-01 100.0% 84.7%
1lddA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.65e-01 95.5% 94.6%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 59.0 5.21e-01 100.0% 74.3%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 59.0 5.33e-01 100.0% 78.7%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 59.0 5.66e-01 100.0% 85.3%
1o3sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 58.0 5.72e-01 95.5% 98.6%
2qenA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 57.0 5.65e-01 100.0% 88.6%
2plyB01 1.10.10.2770 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.68 60.0 4.71e-01 98.5% 49.3%
4kibA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 57.0 5.03e-01 100.0% 62.6%
2v9vA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 59.0 5.81e-01 95.5% 95.7%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 58.0 5.51e-01 100.0% 88.9%
3to7A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 51.0 4.85e-01 100.0% 69.1%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 5.57e-01 100.0% 92.3%
3go5A04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 57.0 5.88e-01 95.5% 98.4%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 60.0 5.10e-01 100.0% 68.6%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 5.16e-01 100.0% 74.4%
1zybA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 58.0 4.04e-01 100.0% 30.0%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 5.21e-01 100.0% 76.5%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 59.0 5.71e-01 100.0% 93.2%
2qlzA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 53.0 5.47e-01 100.0% 96.8%
1cf7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 57.0 5.36e-01 100.0% 91.5%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 5.24e-01 100.0% 87.5%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 57.0 4.87e-01 100.0% 66.0%
2fmyA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 54.0 5.15e-01 100.0% 90.2%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 54.0 5.03e-01 97.0% 74.7%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 55.0 5.13e-01 100.0% 86.9%
3by6C01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 55.0 5.26e-01 97.0% 81.8%
2cw7A02 1.10.10.1010 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Intein homing endonuclease, domain IV 0.64 43.0 3.39e-01 100.0% 31.5%
1xdsB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.28e-01 100.0% 57.6%
3dkwG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 54.0 5.11e-01 100.0% 86.4%
3e97A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 54.0 5.18e-01 100.0% 92.3%
4p9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 5.31e-01 97.0% 92.5%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 54.0 5.30e-01 97.0% 87.7%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 55.0 5.08e-01 100.0% 76.5%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 52.0 4.97e-01 100.0% 90.0%
1w9lA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 36.0 4.46e-01 71.2% 100.0%
2h6bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 52.0 4.72e-01 100.0% 75.0%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 47.0 4.39e-01 100.0% 68.5%
2w82A03 1.10.10.1190 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Antirestriction protein ArdA, domain 3 0.59 42.0 4.32e-01 77.3% 100.0%
2k5tA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 42.0 3.47e-01 97.0% 40.6%
2rsxA00 3.10.450.420 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 46.0 3.65e-01 100.0% 52.8%
1oltA02 1.10.10.920 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.55 43.0 4.05e-01 87.9% 69.1%
2be4A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.54 46.0 4.30e-01 100.0% 100.0%
1xmxA03 1.10.10.680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Hypothetical protein VC1899 (Restriction endonuclease-like) 0.54 48.0 4.39e-01 100.0% 77.5%
2zzzA02 3.30.63.10 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain 0.52 37.0 3.87e-01 77.3% 88.3%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5075222 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 71.0 6.67e-01 100.0% 73.8%
5010332 101.1.2.234 alpha arrays › HTH › HTH › winged helix domain › DUF6995 0.84 69.0 6.80e-01 100.0% 82.9%
5046069 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 70.0 6.39e-01 100.0% 69.4%
4972049 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 69.0 5.83e-01 100.0% 56.2%
4028118 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 75.0 6.37e-01 100.0% 68.6%
4977854 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 68.0 6.23e-01 100.0% 69.4%
3826771 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.82 64.0 5.11e-01 100.0% 44.0%
4957190 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 67.0 6.28e-01 100.0% 72.5%
4944093 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 68.0 6.13e-01 100.0% 66.7%
5020205 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 61.0 4.26e-01 100.0% 25.9%
4991762 101.1.2.643 alpha arrays › HTH › HTH › winged helix domain › AAA_assoc_C 0.81 65.0 6.23e-01 100.0% 76.0%
4028933 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 71.0 6.95e-01 95.5% 92.9%
4991639 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 65.0 6.05e-01 100.0% 71.2%
3808197 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.80 65.0 5.03e-01 100.0% 41.4%
3606219 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 70.0 6.94e-01 95.5% 94.3%
4954672 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 62.0 6.74e-01 100.0% 100.0%
5073482 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 61.0 6.02e-01 97.0% 77.1%
5040940 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 70.0 5.91e-01 100.0% 60.0%
5022580 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 64.0 5.77e-01 95.5% 64.4%
4031683 101.1.2.478 alpha arrays › HTH › HTH › winged helix domain › ssDNA-exonuc_C 0.79 65.0 6.79e-01 98.5% 100.0%
5032090 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.78 62.0 6.15e-01 100.0% 80.0%
4963349 101.1.2.912 alpha arrays › HTH › HTH › winged helix domain › DUF5830 0.78 67.0 5.54e-01 100.0% 53.9%
5044919 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 62.0 5.98e-01 100.0% 76.7%
3941890 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 69.0 6.76e-01 95.5% 90.0%
4947375 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 65.0 6.06e-01 100.0% 75.0%
4966079 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.77 60.0 5.19e-01 100.0% 55.0%
4219206 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 65.0 4.39e-01 100.0% 26.7%
5030726 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 63.0 6.56e-01 95.5% 96.7%
5015794 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 65.0 6.10e-01 100.0% 76.2%
4938492 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 62.0 5.82e-01 100.0% 72.5%
4962065 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.77 61.0 6.00e-01 100.0% 81.4%
5002953 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.77 60.0 5.69e-01 100.0% 70.9%
5069692 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 60.0 6.27e-01 100.0% 93.3%
4979220 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 67.0 6.79e-01 98.5% 98.5%
4988663 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.77 60.0 5.54e-01 100.0% 65.9%
4947604 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 59.0 5.20e-01 95.5% 57.4%
5078848 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 59.0 4.83e-01 97.0% 45.8%
4931105 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 57.0 4.62e-01 100.0% 42.4%
4971257 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 66.0 4.72e-01 100.0% 34.1%
5052446 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 62.0 5.15e-01 100.0% 51.3%
5054231 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 63.0 6.05e-01 100.0% 80.0%
5018201 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.76 59.0 6.11e-01 98.5% 91.7%
4954458 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 61.0 5.88e-01 100.0% 77.3%
5050269 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 65.0 6.58e-01 100.0% 96.9%
4670430 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.75 60.0 5.62e-01 100.0% 71.2%
4979491 101.1.2.894 alpha arrays › HTH › HTH › winged helix domain › DUF2240 0.75 66.0 6.52e-01 100.0% 92.9%
4956461 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 65.0 6.00e-01 95.5% 80.7%
4112271 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 60.0 5.82e-01 100.0% 78.7%
3224625 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.75 63.0 6.05e-01 95.5% 81.3%
5073255 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 67.0 5.77e-01 100.0% 65.0%
3667030 101.1.2.466 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C 0.75 64.0 6.08e-01 95.5% 80.8%
4390915 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 60.0 5.10e-01 100.0% 53.6%
4039627 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 60.0 4.41e-01 100.0% 32.8%
5015489 314.1.1.3 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d 0.75 60.0 3.57e-01 100.0% 12.0%
5002434 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 62.0 6.01e-01 100.0% 81.3%
3465917 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 64.0 3.80e-01 95.5% 13.3%
4964118 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.74 57.0 4.99e-01 100.0% 55.0%
5072968 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 56.0 5.72e-01 100.0% 83.1%
3677397 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 64.0 3.76e-01 95.5% 12.7%
5079006 101.1.2.27 alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind 0.74 61.0 4.76e-01 100.0% 42.9%
5072150 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 59.0 5.16e-01 100.0% 58.0%
4963433 101.1.2.919 alpha arrays › HTH › HTH › winged helix domain › DUF5817_CT 0.74 58.0 5.39e-01 95.5% 67.9%
3398923 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.74 66.0 6.21e-01 100.0% 82.5%
3555783 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.74 63.0 5.66e-01 95.5% 67.7%
5063747 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 66.0 4.98e-01 100.0% 42.6%
5019846 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.74 60.0 5.26e-01 100.0% 61.1%
5055754 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 65.0 5.54e-01 100.0% 61.9%
5050370 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.73 60.0 4.14e-01 100.0% 27.6%
3282607 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 61.0 4.91e-01 100.0% 48.0%
3982788 101.1.2.89 alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.73 60.0 5.92e-01 100.0% 84.3%
5031879 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 61.0 5.40e-01 98.5% 63.2%
5012052 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.73 60.0 4.81e-01 100.0% 46.2%
5003459 101.1.2.19 alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.73 65.0 4.69e-01 100.0% 35.7%
5024114 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.73 62.0 4.83e-01 100.0% 44.3%
3497894 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.73 63.0 5.82e-01 95.5% 77.1%
4947420 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 63.0 5.38e-01 100.0% 60.0%
4162612 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.73 58.0 4.76e-01 100.0% 48.3%
3944078 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 60.0 5.95e-01 100.0% 87.1%
3897679 148.1.3.361 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › WH_MCM3_C 0.72 60.0 6.06e-01 92.4% 93.8%
4047193 101.1.2.385 alpha arrays › HTH › HTH › winged helix domain › HRQ1_WHD 0.72 52.0 5.17e-01 100.0% 72.9%
4039721 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.72 64.0 5.07e-01 100.0% 48.9%
3550852 101.1.2.86 alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 0.72 63.0 5.54e-01 100.0% 72.0%
3846854 101.1.2.466 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C 0.71 58.0 5.77e-01 92.4% 87.1%
5034425 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 54.0 4.99e-01 98.5% 64.7%
3489856 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 62.0 5.89e-01 100.0% 85.0%
4870207 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.70 59.0 5.42e-01 100.0% 72.1%
5019169 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.70 61.0 5.70e-01 100.0% 78.8%
3617343 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 57.0 5.51e-01 90.9% 84.0%
4997786 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 61.0 5.66e-01 100.0% 76.5%
2997076 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.69 60.0 5.53e-01 100.0% 82.0%
5001123 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 58.0 5.19e-01 100.0% 65.3%
5013587 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 54.0 5.33e-01 100.0% 81.4%
3588658 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 62.0 5.44e-01 100.0% 85.3%
4947731 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 56.0 5.03e-01 100.0% 64.2%
3713447 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 61.0 5.49e-01 100.0% 81.1%
5024578 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 48.0 5.33e-01 77.3% 100.0%
3720181 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 61.0 4.82e-01 100.0% 56.2%
5081885 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 59.0 5.53e-01 100.0% 81.2%
5042509 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 58.0 5.60e-01 98.5% 86.7%
4322759 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.64 55.0 5.23e-01 100.0% 86.1%
D3 high residues 195-253
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wujA00 6.10.250.660 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.72 49.0 5.26e-01 71.2% 94.0%
2okcB01 1.20.1260.30 Mainly Alpha › Up-down Bundle › Ferritin › N6 adenine-specific DNA methyltransferase, N-terminal domain 0.64 48.0 3.74e-01 91.5% 39.2%
5exeA01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.61 53.0 3.53e-01 100.0% 92.4%
6nyyE01 1.20.58.760 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41 0.61 54.0 3.86e-01 100.0% 45.1%
2lpeA01 6.10.140.1120 Special › Helix non-globular › Helix Hairpins › 0.58 40.0 3.68e-01 72.9% 75.6%
2ig3A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.56 46.0 3.63e-01 91.5% 81.1%
3gr3A00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.55 45.0 3.05e-01 91.5% 81.0%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4344316 109.40.1.1 alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Hira 0.55 44.0 3.38e-01 94.9% 36.6%