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CAKLQF020000030.1__CAH1093842.1__SAMEA5780031_03759__00003
Bact-VirCAKLQF020000030.1__CAH1093842.1__SAMEA5780031_03759__00003
Identity
- Kingdom:
- phage
Quality
85.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 147-275
Domain cluster:
rep: Mad1_20_16_scaffold_0_curated_closed_complete_start-adj_prodigal-single.1__X__X__00506__D147-285
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00691.26 best | OmpA | 61.3 | 1.40e-16 | 76.0% | 93.9% |
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rhaA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.94 | 90.0 | 8.96e-01 | 100.0% | 96.9% |
| 5m38C00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.92 | 79.0 | 8.39e-01 | 96.9% | 100.0% |
| 1r1mA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.90 | 87.0 | 8.40e-01 | 100.0% | 98.6% |
| 5wtpA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.85 | 77.0 | 7.90e-01 | 97.7% | 97.6% |
| 3oonA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.85 | 68.0 | 7.24e-01 | 97.7% | 93.8% |
| 3cypB00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.84 | 73.0 | 7.38e-01 | 97.7% | 91.5% |
| 6aeoB01 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.83 | 74.0 | 7.29e-01 | 97.7% | 88.1% |
| 3khnB00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.83 | 79.0 | 7.30e-01 | 99.2% | 96.8% |
| 4b62A00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.83 | 79.0 | 7.61e-01 | 99.2% | 100.0% |
| 2lbtA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.83 | 72.0 | 7.23e-01 | 97.7% | 90.1% |
| 2aizP01 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.82 | 66.0 | 7.14e-01 | 94.6% | 100.0% |
| 2zovA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.72 | 67.0 | 6.12e-01 | 99.2% | 89.2% |
| 5hy0A01 | 3.30.1330.170 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A | 0.70 | 52.0 | 5.67e-01 | 100.0% | 93.5% |
| 5hweA01 | 3.30.1330.170 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A | 0.70 | 53.0 | 5.71e-01 | 100.0% | 95.3% |
| 3vpaB00 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.69 | 49.0 | 3.82e-01 | 99.2% | 33.9% |
| 5l16A01 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.67 | 51.0 | 5.26e-01 | 100.0% | 84.6% |
| 2yxzD01 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.66 | 50.0 | 4.87e-01 | 100.0% | 71.8% |
| 1ofuA02 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.66 | 46.0 | 5.23e-01 | 97.7% | 100.0% |
| 1vk3A03 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.65 | 49.0 | 4.77e-01 | 100.0% | 70.1% |
| 6k96B02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.65 | 43.0 | 4.87e-01 | 91.5% | 88.7% |
| 1w5eB02 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.65 | 47.0 | 5.05e-01 | 97.7% | 89.6% |
| 1w5fA02 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.65 | 47.0 | 4.90e-01 | 100.0% | 81.7% |
| 2rb9A01 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.64 | 48.0 | 4.64e-01 | 100.0% | 70.1% |
| 1yawB01 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.64 | 48.0 | 4.78e-01 | 100.0% | 76.1% |
| 3byqA00 | 3.30.1330.110 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › BB2672 | 0.63 | 58.0 | 5.07e-01 | 99.2% | 74.9% |
| 3a43A01 | 3.30.2320.50 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › | 0.63 | 39.0 | 4.69e-01 | 86.8% | 100.0% |
| 4fb5A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.62 | 50.0 | 3.98e-01 | 83.7% | 58.3% |
| 3d01E00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.61 | 53.0 | 5.04e-01 | 100.0% | 78.7% |
| 1dihA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.61 | 45.0 | 4.89e-01 | 91.5% | 91.7% |
| 1nvmB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.61 | 41.0 | 3.88e-01 | 93.0% | 56.5% |
| 3e9mB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.60 | 47.0 | 4.10e-01 | 83.7% | 61.6% |
| 4c81A00 | 3.30.1330.50 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | 0.60 | 54.0 | 5.11e-01 | 100.0% | 96.8% |
| 3hgmA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.59 | 51.0 | 4.89e-01 | 91.5% | 89.8% |
| 1gx1A00 | 3.30.1330.50 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | 0.59 | 53.0 | 4.98e-01 | 99.2% | 99.4% |
| 3euwA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.59 | 47.0 | 3.95e-01 | 84.5% | 59.2% |
| 2gviA02 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.59 | 35.0 | 3.93e-01 | 86.0% | 77.3% |
| 2iu4A02 | 3.30.1180.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 | 0.59 | 52.0 | 4.97e-01 | 96.9% | 86.1% |
| 1vbkA02 | 3.30.2300.10 | Alpha Beta › 2-Layer Sandwich › THUMP fold › THUMP superfamily | 0.59 | 37.0 | 4.50e-01 | 85.3% | 100.0% |
| 6jw7A01 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 45.0 | 4.02e-01 | 82.2% | 67.0% |
| 3o9zD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 44.0 | 4.00e-01 | 80.6% | 67.6% |
| 4gqaB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 44.0 | 3.56e-01 | 79.1% | 55.6% |
| 2lc0A00 | 3.30.2320.60 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › FhaA, phosphopeptide-binding domain (DUF3662) | 0.58 | 44.0 | 4.40e-01 | 87.6% | 78.8% |
| 2pidA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 50.0 | 4.20e-01 | 96.9% | 72.2% |
| 3uuwB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.57 | 45.0 | 3.99e-01 | 82.9% | 59.8% |
| 2kdxA00 | 3.30.2320.80 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › | 0.57 | 47.0 | 4.86e-01 | 89.1% | 97.5% |
| 2uzhA00 | 3.30.1330.50 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | 0.57 | 51.0 | 4.88e-01 | 100.0% | 99.3% |
| 3cinA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.57 | 40.0 | 4.39e-01 | 93.8% | 91.3% |
| 3pl5A03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.57 | 48.0 | 5.00e-01 | 99.2% | 98.3% |
| 2p2sA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.56 | 47.0 | 4.12e-01 | 90.7% | 80.1% |
| 3gdoA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.56 | 45.0 | 3.87e-01 | 84.5% | 56.8% |
| 4kqcA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 42.0 | 3.98e-01 | 85.3% | 80.6% |
| 2ha9B00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.52 | 46.0 | 3.27e-01 | 100.0% | 55.9% |
| 2dyjA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.51 | 35.0 | 3.96e-01 | 76.0% | 98.9% |
| 1lqlA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.50 | 36.0 | 3.99e-01 | 75.2% | 99.0% |
| 7s0tF01 | 3.60.21.50 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › | 0.50 | 42.0 | 3.24e-01 | 93.0% | 86.6% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4676587 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.93 | 83.0 | 8.53e-01 | 100.0% | 95.9% |
| 4482275 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.92 | 83.0 | 7.83e-01 | 96.9% | 80.0% |
| 2798263 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.92 | 81.0 | 7.63e-01 | 99.2% | 78.5% |
| 3948407 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.92 | 81.0 | 8.30e-01 | 99.2% | 94.4% |
| 4167111 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.90 | 79.0 | 8.23e-01 | 96.1% | 99.2% |
| 3967490 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.89 | 75.0 | 8.00e-01 | 96.9% | 98.3% |
| 2798318 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.89 | 78.0 | 7.36e-01 | 100.0% | 78.1% |
| 3976972 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.89 | 79.0 | 7.47e-01 | 98.4% | 79.9% |
| 1347560 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.88 | 83.0 | 7.96e-01 | 100.0% | 88.4% |
| 4527021 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.87 | 69.0 | 7.32e-01 | 96.9% | 92.2% |
| 3981506 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.86 | 83.0 | 7.56e-01 | 99.2% | 89.4% |
| 3962237 | 301.3.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like | 0.86 | 73.0 | 7.79e-01 | 96.1% | 100.0% |
| 3964336 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.86 | 82.0 | 7.71e-01 | 99.2% | 95.3% |
| 4346934 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.85 | 69.0 | 7.36e-01 | 97.7% | 94.8% |
| 3386470 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.85 | 76.0 | 7.91e-01 | 98.4% | 100.0% |
| None | — | 0.85 | 77.0 | 7.90e-01 | 97.7% | 97.6% | |
| None | — | 0.85 | 82.0 | 7.69e-01 | 99.2% | 95.3% | |
| 4885799 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.85 | 75.0 | 7.73e-01 | 97.7% | 95.9% |
| 140769 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.85 | 68.0 | 7.24e-01 | 97.7% | 93.8% |
| 4273645 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.85 | 75.0 | 7.36e-01 | 99.2% | 86.2% |
| 3385657 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.85 | 77.0 | 7.86e-01 | 99.2% | 98.4% |
| 216283 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.84 | 76.0 | 6.50e-01 | 97.7% | 64.0% |
| 3973393 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.84 | 81.0 | 7.61e-01 | 100.0% | 89.3% |
| 3967481 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.83 | 79.0 | 7.48e-01 | 99.2% | 86.0% |
| 137312 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.83 | 79.0 | 7.32e-01 | 98.4% | 96.8% |
| 4182188 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.83 | 79.0 | 7.24e-01 | 99.2% | 96.2% |
| 2773879 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.83 | 77.0 | 7.27e-01 | 97.7% | 98.0% |
| 1824325 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.83 | 78.0 | 7.64e-01 | 99.2% | 97.1% |
| 3971865 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.82 | 79.0 | 7.20e-01 | 99.2% | 93.8% |
| 3968879 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.82 | 78.0 | 7.25e-01 | 99.2% | 92.9% |
| 344882 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.82 | 71.0 | 7.19e-01 | 93.0% | 90.6% |
| 4886896 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.82 | 58.0 | 6.10e-01 | 77.5% | 79.0% |
| 3967361 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.81 | 67.0 | 7.01e-01 | 97.7% | 94.1% |
| 4007736 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.81 | 77.0 | 7.57e-01 | 99.2% | 100.0% |
| 1347936 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.81 | 69.0 | 7.04e-01 | 96.9% | 92.7% |
| 3387029 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.80 | 75.0 | 7.07e-01 | 98.4% | 93.3% |
| 3386253 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.80 | 73.0 | 6.97e-01 | 100.0% | 85.5% |
| 2499495 | 301.3.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA | 0.79 | 75.0 | 6.72e-01 | 99.2% | 92.4% |
| 1954435 | 301.7.1.3 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Amido_AtzD_TrzD | 0.70 | 53.0 | 5.71e-01 | 100.0% | 95.3% |
| 3626848 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.69 | 51.0 | 4.54e-01 | 100.0% | 53.5% |
| 341068 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.68 | 50.0 | 4.88e-01 | 100.0% | 70.2% |
| 5044931 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.68 | 50.0 | 4.89e-01 | 100.0% | 70.7% |
| 3598818 | 301.2.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like | 0.67 | 51.0 | 4.67e-01 | 100.0% | 60.1% |
| 3489448 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.67 | 43.0 | 5.02e-01 | 90.7% | 96.5% |
| 4979713 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.67 | 47.0 | 4.60e-01 | 100.0% | 65.5% |
| 4975667 | 304.111.1.4 ↗ | a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS | 0.66 | 48.0 | 3.66e-01 | 100.0% | 31.4% |
| 4943452 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.66 | 48.0 | 4.70e-01 | 100.0% | 68.3% |
| 4534141 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.66 | 49.0 | 4.82e-01 | 100.0% | 72.1% |
| 4983512 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.66 | 48.0 | 4.74e-01 | 100.0% | 70.7% |
| 4950096 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.64 | 42.0 | 4.90e-01 | 88.4% | 100.0% |
| 4930789 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.64 | 40.0 | 4.74e-01 | 88.4% | 100.0% |
| 4229964 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.63 | 40.0 | 4.72e-01 | 89.1% | 100.0% |
| 5025733 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.63 | 40.0 | 4.63e-01 | 86.8% | 95.3% |
| 5009067 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.63 | 47.0 | 4.49e-01 | 100.0% | 67.3% |
| 4448010 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.62 | 40.0 | 4.71e-01 | 88.4% | 100.0% |
| 4541129 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.62 | 40.0 | 4.69e-01 | 89.1% | 100.0% |
| 4156345 | 301.4.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA | 0.60 | 50.0 | 5.23e-01 | 97.7% | 97.5% |
| 4611450 | 301.5.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › YgbB | 0.60 | 54.0 | 4.94e-01 | 100.0% | 90.3% |
| 4178306 | 301.5.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › YgbB | 0.60 | 54.0 | 4.97e-01 | 100.0% | 97.6% |
| 4630790 | 301.5.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › YgbB | 0.60 | 54.0 | 5.04e-01 | 100.0% | 95.7% |
| 4383561 | 301.5.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › YgbB | 0.60 | 54.0 | 4.94e-01 | 100.0% | 97.6% |
| 3452108 | 301.7.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like | 0.59 | 53.0 | 5.04e-01 | 100.0% | 83.7% |
| 4151893 | 301.5.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › YgbB | 0.59 | 54.0 | 4.98e-01 | 100.0% | 95.2% |
| 4411768 | 301.5.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › YgbB | 0.59 | 54.0 | 4.94e-01 | 100.0% | 95.8% |
| 3838794 | 301.5.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › YgbB | 0.59 | 54.0 | 4.95e-01 | 100.0% | 94.5% |
| 166317 | 301.5.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › YgbB | 0.59 | 53.0 | 5.08e-01 | 100.0% | 98.7% |
| 4021134 | 301.7.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like | 0.58 | 52.0 | 4.59e-01 | 100.0% | 66.8% |
| 3377563 | 301.7.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like | 0.58 | 51.0 | 4.83e-01 | 98.4% | 85.6% |
| 3194242 | 301.7.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like | 0.58 | 53.0 | 4.42e-01 | 100.0% | 77.3% |
| 4508860 | 301.5.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › YgbB | 0.58 | 53.0 | 4.97e-01 | 100.0% | 98.7% |
| 4462039 | 301.5.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › YgbB | 0.57 | 51.0 | 4.88e-01 | 97.7% | 98.7% |
| 5005020 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.57 | 48.0 | 4.65e-01 | 90.7% | 82.1% |
| 3736600 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.57 | 48.0 | 3.51e-01 | 92.2% | 74.2% |
| 4032023 | 301.13.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › Dak1 | 0.56 | 50.0 | 4.86e-01 | 96.1% | 89.3% |
| 4239149 | 301.5.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › YgbB | 0.56 | 50.0 | 4.63e-01 | 100.0% | 100.0% |
| 4504924 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.55 | 45.0 | 4.73e-01 | 88.4% | 100.0% |
| 3339440 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.55 | 42.0 | 4.55e-01 | 89.1% | 99.0% |
| 4183914 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.54 | 44.0 | 4.57e-01 | 89.1% | 100.0% |
| 5022702 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.53 | 38.0 | 4.27e-01 | 86.0% | 100.0% |
| 4460702 | 327.10.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › RBFA | 0.52 | 40.0 | 4.22e-01 | 81.4% | 90.4% |
| 3930015 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.52 | 37.0 | 3.11e-01 | 74.4% | 41.7% |
| 3277863 | 4143.1.1.0 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like | 0.51 | 41.0 | 4.36e-01 | 94.6% | 98.3% |
D2
medium
residues 23-144
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04355.19 best | BamE | 52.5 | 4.90e-14 | 60.7% | 94.4% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b1xA01 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.54 | 41.0 | 3.06e-01 | 80.3% | 62.5% |
| 3mg1B02 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 37.0 | 3.69e-01 | 70.5% | 95.2% |
| 3rgaA02 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 37.0 | 3.53e-01 | 72.1% | 89.2% |
| 3nqhA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 38.0 | 2.88e-01 | 73.8% | 96.0% |
| 1c7hA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 37.0 | 3.77e-01 | 72.1% | 88.6% |
| 4dy0B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.52 | 34.0 | 3.42e-01 | 92.6% | 64.1% |
| 2imjD01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 35.0 | 3.39e-01 | 70.5% | 78.9% |
| 5aigA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 36.0 | 3.66e-01 | 74.6% | 91.1% |
| 1cruA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 35.0 | 2.42e-01 | 71.3% | 35.5% |
| 4h3uA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 36.0 | 3.58e-01 | 74.6% | 93.1% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4207624 | 809.1.1.1 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA | 0.84 | 54.0 | 6.69e-01 | 70.5% | 100.0% |
| 4661228 | 809.1.1.1 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA | 0.77 | 50.0 | 5.74e-01 | 75.4% | 88.9% |
| 4067255 | 809.1.1.1 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA | 0.76 | 49.0 | 5.83e-01 | 75.4% | 94.1% |
| 4216850 | 809.1.1.1 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA | 0.76 | 49.0 | 5.80e-01 | 73.8% | 92.9% |
| 4124096 | 809.1.1.1 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA | 0.75 | 48.0 | 5.84e-01 | 73.8% | 97.5% |
| 4295342 | 809.1.1.1 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA | 0.71 | 50.0 | 5.68e-01 | 76.2% | 93.7% |
| 3396462 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.65 | 29.0 | 3.83e-01 | 86.1% | 76.9% |
| 4014240 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.57 | 43.0 | 4.07e-01 | 78.7% | 90.3% |
| 3734807 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.56 | 48.0 | 4.34e-01 | 95.1% | 97.6% |
| 3733581 | 243.1.1.78 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26534 | 0.53 | 37.0 | 3.47e-01 | 72.1% | 83.9% |
| 3789159 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 37.0 | 2.47e-01 | 70.5% | 19.2% |
| 2886759 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.52 | 38.0 | 3.64e-01 | 73.8% | 89.2% |
| 4565299 | 243.1.1.6 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 | 0.51 | 36.0 | 3.40e-01 | 70.5% | 91.7% |
| 5012323 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 35.0 | 2.51e-01 | 71.3% | 27.3% |
| 3671367 | 5.1.4.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin_propel | 0.51 | 35.0 | 2.55e-01 | 71.3% | 59.4% |
| 4131272 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.51 | 35.0 | 3.30e-01 | 71.3% | 81.9% |
| 4014154 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.51 | 35.0 | 3.36e-01 | 70.5% | 77.2% |
| 3613822 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 41.0 | 2.81e-01 | 86.9% | 97.7% |