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CAKLQF020000030.1__CAH1093879.1__SAMEA5780031_03771__00015
Bact-VirCAKLQF020000030.1__CAH1093879.1__SAMEA5780031_03771__00015
Identity
- Kingdom:
- phage
Quality
93.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-216
Domain cluster:
rep: SR-VP_0-2_scaffold_141_2072294_prodigal-single.1__X__X__00155__D41-318
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02110.21 best | HK | 192.6 | 1.10e-56 | 100.0% | 78.1% |
CATH (78)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1c3qA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.92 | 90.0 | 7.69e-01 | 100.0% | 69.0% |
| 5cgaE00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.92 | 84.0 | 7.50e-01 | 100.0% | 72.2% |
| 3dzvA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.89 | 86.0 | 7.60e-01 | 100.0% | 73.9% |
| 3nl6C02 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.86 | 83.0 | 7.07e-01 | 100.0% | 69.7% |
| 3iq0A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.80 | 75.0 | 6.32e-01 | 99.0% | 87.0% |
| 3vasA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.78 | 74.0 | 6.47e-01 | 100.0% | 88.7% |
| 3uboB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.78 | 74.0 | 6.09e-01 | 100.0% | 88.7% |
| 2r3bA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.78 | 74.0 | 6.50e-01 | 100.0% | 75.6% |
| 2f02B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.77 | 73.0 | 6.09e-01 | 99.0% | 85.7% |
| 2v0nA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.75 | 46.0 | 5.31e-01 | 100.0% | 82.2% |
| 3hv2A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.75 | 46.0 | 5.50e-01 | 100.0% | 89.0% |
| 7pvaB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.74 | 45.0 | 5.64e-01 | 98.5% | 98.3% |
| 3rqiA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.74 | 44.0 | 5.39e-01 | 99.0% | 90.6% |
| 3gt7A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.74 | 46.0 | 5.52e-01 | 99.5% | 91.7% |
| 2jk1A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.74 | 45.0 | 5.28e-01 | 99.0% | 85.5% |
| 3crnA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.74 | 45.0 | 5.47e-01 | 99.5% | 92.2% |
| 2rdmA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.74 | 45.0 | 5.62e-01 | 100.0% | 96.8% |
| 5u8kA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 45.0 | 5.61e-01 | 99.5% | 97.5% |
| 6ontA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 45.0 | 5.63e-01 | 99.5% | 98.3% |
| 1zitA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 45.0 | 5.60e-01 | 100.0% | 98.3% |
| 3cfyA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 45.0 | 5.46e-01 | 100.0% | 92.3% |
| 1w25A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 45.0 | 5.29e-01 | 99.5% | 85.8% |
| 4d6yA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 45.0 | 5.60e-01 | 98.5% | 98.3% |
| 2j48A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 43.0 | 5.41e-01 | 100.0% | 95.8% |
| 5dclA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 44.0 | 5.58e-01 | 100.0% | 100.0% |
| 1mb3A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 43.0 | 5.49e-01 | 99.5% | 98.3% |
| 3t6kA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 45.0 | 5.64e-01 | 100.0% | 100.0% |
| 3nhmA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 42.0 | 5.44e-01 | 99.0% | 98.3% |
| 4q7eA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 45.0 | 5.56e-01 | 100.0% | 97.6% |
| 3breB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 45.0 | 5.24e-01 | 100.0% | 86.0% |
| 2pl1A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 43.0 | 5.43e-01 | 98.5% | 97.5% |
| 3cg4A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 45.0 | 5.49e-01 | 100.0% | 96.8% |
| 2zayA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 44.0 | 5.50e-01 | 99.5% | 98.4% |
| 3i42A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 43.0 | 5.43e-01 | 99.5% | 100.0% |
| 3khtA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 47.0 | 5.65e-01 | 99.5% | 100.0% |
| 3grcA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 44.0 | 5.42e-01 | 100.0% | 98.4% |
| 6zxbA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 42.0 | 5.10e-01 | 98.5% | 90.8% |
| 2eklA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.69 | 43.0 | 5.28e-01 | 100.0% | 98.3% |
| 3al2A02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.69 | 32.0 | 4.71e-01 | 74.5% | 93.8% |
| 3c3mA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 39.0 | 4.86e-01 | 91.8% | 89.4% |
| 1ab5A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 43.0 | 5.30e-01 | 99.5% | 100.0% |
| 4ivnA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.68 | 44.0 | 4.52e-01 | 96.4% | 68.1% |
| 3kb6A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 41.0 | 4.88e-01 | 98.5% | 89.3% |
| 1dcfA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 42.0 | 4.96e-01 | 100.0% | 91.7% |
| 7en7A01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.65 | 43.0 | 4.48e-01 | 98.0% | 71.0% |
| 5lnmA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 42.0 | 4.74e-01 | 100.0% | 91.3% |
| 4n03A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 45.0 | 4.79e-01 | 91.3% | 85.8% |
| 1vb5B02 | 3.40.50.10470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 | 0.60 | 43.0 | 4.46e-01 | 71.9% | 92.8% |
| 3vpaB00 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.60 | 49.0 | 4.33e-01 | 86.2% | 86.8% |
| 4yrbA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 51.0 | 5.06e-01 | 90.8% | 99.5% |
| 1k6jB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 50.0 | 5.01e-01 | 89.3% | 99.5% |
| 3a9iA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 43.0 | 3.93e-01 | 80.1% | 81.4% |
| 2wmiA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 48.0 | 3.89e-01 | 90.8% | 76.0% |
| 3irsA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 50.0 | 4.46e-01 | 98.0% | 77.6% |
| 1rjqA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 51.0 | 4.45e-01 | 99.5% | 95.6% |
| 1nfgA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 49.0 | 4.06e-01 | 94.9% | 89.1% |
| 1kcxA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 50.0 | 4.04e-01 | 96.9% | 86.1% |
| 1aa1B02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.55 | 46.0 | 4.00e-01 | 88.8% | 70.8% |
| 1gkpA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.55 | 51.0 | 4.17e-01 | 99.5% | 81.4% |
| 2wmfA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 47.0 | 3.91e-01 | 90.3% | 89.4% |
| 2wb4B01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 44.0 | 3.98e-01 | 84.7% | 85.5% |
| 3tr2B00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 43.0 | 4.11e-01 | 81.6% | 77.8% |
| 1a9xB02 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.54 | 48.0 | 4.58e-01 | 100.0% | 82.0% |
| 2w7tA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.54 | 50.0 | 4.50e-01 | 99.5% | 94.7% |
| 3tfxA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 42.0 | 4.02e-01 | 81.6% | 75.8% |
| 5mn7A01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.54 | 43.0 | 4.70e-01 | 86.7% | 100.0% |
| 4g2dA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.53 | 49.0 | 4.17e-01 | 100.0% | 98.7% |
| 3pnzA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.53 | 48.0 | 4.08e-01 | 99.5% | 98.2% |
| 3b8iC00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.53 | 44.0 | 3.98e-01 | 90.8% | 94.6% |
| 6y9tB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 47.0 | 3.78e-01 | 99.0% | 97.7% |
| 3tc3B00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.52 | 47.0 | 4.15e-01 | 99.0% | 99.3% |
| 1bf6A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.52 | 47.0 | 4.17e-01 | 100.0% | 100.0% |
| 5v1qB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 47.0 | 4.10e-01 | 96.9% | 86.4% |
| 4ovxA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.51 | 45.0 | 4.09e-01 | 94.9% | 92.2% |
| 6fnuA00 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.51 | 44.0 | 3.89e-01 | 93.9% | 88.5% |
| 3qz6A00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.50 | 46.0 | 4.15e-01 | 96.9% | 84.6% |
| 2aqwA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 46.0 | 3.92e-01 | 100.0% | 94.7% |
| 5tcgA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 45.0 | 4.22e-01 | 99.0% | 91.2% |
ECOD (92)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4579167 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.97 | 82.0 | 7.42e-01 | 100.0% | 68.6% |
| 4087168 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.92 | 90.0 | 7.94e-01 | 100.0% | 74.0% |
| 4130983 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.92 | 90.0 | 7.93e-01 | 100.0% | 74.6% |
| 4320659 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.92 | 90.0 | 7.77e-01 | 100.0% | 74.3% |
| 3294582 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.92 | 90.0 | 7.71e-01 | 100.0% | 73.5% |
| 4318430 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.92 | 88.0 | 7.68e-01 | 100.0% | 70.9% |
| 4302955 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.91 | 88.0 | 7.72e-01 | 100.0% | 72.4% |
| 4581585 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.91 | 88.0 | 7.77e-01 | 100.0% | 73.6% |
| 4361167 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.91 | 88.0 | 7.80e-01 | 100.0% | 74.6% |
| 4619533 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.90 | 89.0 | 7.56e-01 | 100.0% | 70.9% |
| 4223141 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.90 | 88.0 | 7.71e-01 | 100.0% | 72.8% |
| 4173589 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.90 | 88.0 | 7.72e-01 | 100.0% | 73.6% |
| 4049592 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.90 | 88.0 | 7.43e-01 | 100.0% | 74.8% |
| 4073136 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.90 | 88.0 | 7.78e-01 | 100.0% | 75.0% |
| 4343882 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.90 | 86.0 | 7.55e-01 | 100.0% | 71.6% |
| 4108091 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.90 | 88.0 | 7.68e-01 | 100.0% | 72.8% |
| 4111477 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.90 | 86.0 | 7.72e-01 | 100.0% | 75.7% |
| 4252028 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.90 | 88.0 | 7.61e-01 | 100.0% | 72.7% |
| 4294614 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.90 | 87.0 | 7.63e-01 | 100.0% | 72.5% |
| 4454328 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.90 | 88.0 | 7.72e-01 | 100.0% | 76.6% |
| None | — | 0.90 | 87.0 | 7.66e-01 | 100.0% | 73.6% | |
| 4184183 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.90 | 87.0 | 7.63e-01 | 100.0% | 72.5% |
| 4350349 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.89 | 87.0 | 7.29e-01 | 100.0% | 71.3% |
| 4268768 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.89 | 87.0 | 7.65e-01 | 100.0% | 74.3% |
| 4024365 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.89 | 87.0 | 7.46e-01 | 100.0% | 72.5% |
| 4185336 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.89 | 86.0 | 7.63e-01 | 100.0% | 75.0% |
| 4516732 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.88 | 84.0 | 7.51e-01 | 100.0% | 74.2% |
| 3196280 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.88 | 86.0 | 7.04e-01 | 100.0% | 62.2% |
| 4449274 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.88 | 86.0 | 7.41e-01 | 100.0% | 72.1% |
| 4111525 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.88 | 84.0 | 7.55e-01 | 100.0% | 75.7% |
| 3739855 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.88 | 85.0 | 7.21e-01 | 100.0% | 66.6% |
| 4434974 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.87 | 85.0 | 7.47e-01 | 100.0% | 75.8% |
| 1311209 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.82 | 79.0 | 6.71e-01 | 100.0% | 67.0% |
| 3393642 | 2003.6.1.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › ADP_PFK_GK | 0.81 | 76.0 | 5.56e-01 | 98.5% | 95.5% |
| 3297545 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.80 | 76.0 | 5.82e-01 | 100.0% | 75.1% |
| 4952606 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.79 | 75.0 | 6.35e-01 | 99.5% | 85.2% |
| 3892927 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.79 | 75.0 | 6.03e-01 | 99.5% | 85.7% |
| 5064558 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.78 | 74.0 | 5.88e-01 | 100.0% | 87.6% |
| 5077903 | 2003.6.1.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › ADP_PFK_GK | 0.78 | 73.0 | 5.39e-01 | 100.0% | 95.1% |
| 4958823 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.78 | 74.0 | 6.18e-01 | 100.0% | 86.0% |
| None | — | 0.77 | 73.0 | 6.10e-01 | 100.0% | 81.9% | |
| 4346718 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.76 | 46.0 | 5.76e-01 | 99.0% | 96.7% |
| 5064590 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.76 | 72.0 | 6.08e-01 | 99.0% | 89.1% |
| 2770097 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.76 | 42.0 | 5.49e-01 | 99.5% | 93.9% |
| 3386692 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.75 | 46.0 | 5.60e-01 | 100.0% | 92.3% |
| 1178794 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.75 | 45.0 | 5.31e-01 | 100.0% | 84.3% |
| 5018240 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.75 | 46.0 | 5.18e-01 | 100.0% | 78.1% |
| 5040660 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.74 | 46.0 | 5.53e-01 | 100.0% | 92.3% |
| 4365581 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.74 | 46.0 | 5.17e-01 | 100.0% | 80.0% |
| 4163006 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.74 | 43.0 | 5.45e-01 | 100.0% | 96.5% |
| 4946894 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.74 | 44.0 | 5.61e-01 | 99.0% | 100.0% |
| 3973896 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.73 | 46.0 | 5.56e-01 | 100.0% | 93.8% |
| 4965031 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.73 | 44.0 | 5.52e-01 | 100.0% | 96.7% |
| 10041 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.73 | 46.0 | 5.21e-01 | 100.0% | 81.0% |
| 4682251 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.73 | 45.0 | 3.47e-01 | 100.0% | 28.8% |
| 4483986 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.73 | 45.0 | 5.16e-01 | 100.0% | 82.8% |
| 4501947 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.72 | 45.0 | 5.47e-01 | 100.0% | 93.8% |
| 4307221 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.72 | 45.0 | 5.02e-01 | 100.0% | 78.1% |
| 4443047 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.72 | 45.0 | 5.42e-01 | 100.0% | 93.8% |
| 3962163 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.72 | 45.0 | 5.22e-01 | 100.0% | 86.4% |
| 4552753 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.71 | 45.0 | 5.38e-01 | 100.0% | 93.8% |
| 2051857 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.71 | 41.0 | 5.23e-01 | 99.5% | 94.9% |
| 3972637 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.71 | 45.0 | 5.39e-01 | 100.0% | 93.8% |
| 3974332 | 2003.1.11.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like | 0.71 | 40.0 | 4.96e-01 | 99.0% | 89.2% |
| 5034012 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.70 | 43.0 | 5.40e-01 | 99.5% | 100.0% |
| 3951560 | 2007.1.3.15 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › GlnR_1st | 0.68 | 41.0 | 4.93e-01 | 99.5% | 91.2% |
| 3973233 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.67 | 43.0 | 5.17e-01 | 100.0% | 97.7% |
| None | — | 0.66 | 43.0 | 4.56e-01 | 98.0% | 72.2% | |
| 4173511 | 2007.6.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS | 0.65 | 44.0 | 4.44e-01 | 98.0% | 68.2% |
| 4963770 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 52.0 | 4.23e-01 | 90.3% | 88.3% |
| None | — | 0.60 | 51.0 | 4.25e-01 | 89.8% | 94.9% | |
| 4190564 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.59 | 50.0 | 3.97e-01 | 90.8% | 83.0% |
| 3250110 | 2003.1.1.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA | 0.58 | 51.0 | 4.37e-01 | 91.3% | 99.0% |
| 3164858 | 2003.1.6.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like | 0.58 | 52.0 | 4.20e-01 | 94.9% | 88.8% |
| 4066512 | 2003.1.6.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like | 0.58 | 52.0 | 4.24e-01 | 94.9% | 85.4% |
| 3322262 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.58 | 43.0 | 4.74e-01 | 99.5% | 93.1% |
| 5052860 | 2007.1.1.42 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › IFT52_GIFT | 0.58 | 54.0 | 5.06e-01 | 100.0% | 95.7% |
| 4932776 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.58 | 52.0 | 4.22e-01 | 94.9% | 88.0% |
| 4974940 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.58 | 49.0 | 4.03e-01 | 89.8% | 92.0% |
| None | — | 0.58 | 52.0 | 4.23e-01 | 94.9% | 86.7% | |
| 4962796 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.57 | 51.0 | 4.22e-01 | 94.9% | 86.7% |
| 4989502 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.57 | 49.0 | 3.80e-01 | 90.8% | 70.9% |
| 4356094 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.55 | 50.0 | 4.72e-01 | 99.5% | 99.2% |
| 5061836 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.54 | 50.0 | 4.85e-01 | 100.0% | 90.9% |
| 4999079 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.54 | 49.0 | 4.98e-01 | 99.0% | 100.0% |
| 2322645 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.54 | 46.0 | 3.55e-01 | 89.8% | 70.5% |
| 5062909 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.53 | 38.0 | 4.15e-01 | 100.0% | 88.5% |
| 4247108 | 2002.1.1.48 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh | 0.52 | 46.0 | 3.83e-01 | 95.9% | 87.4% |
| 5072322 | 2002.1.1.90 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR | 0.52 | 45.0 | 3.97e-01 | 93.9% | 93.1% |
| 142869 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.51 | 46.0 | 3.93e-01 | 100.0% | 93.5% |
| 5054918 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.51 | 39.0 | 3.88e-01 | 81.1% | 82.4% |
| 4230569 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.50 | 45.0 | 4.07e-01 | 98.0% | 77.4% |
D2
medium
residues 1-20_217-275
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nl6C02 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.87 | 78.0 | 5.11e-01 | 94.9% | 95.2% |
| 1c3qA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.87 | 81.0 | 5.36e-01 | 100.0% | 97.2% |
| 3dzvA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.81 | 70.0 | 4.73e-01 | 92.4% | 100.0% |
| 3npiB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.66 | 48.0 | 3.53e-01 | 77.2% | 76.7% |
| 3fhnA04 | 1.20.58.670 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 0.59 | 43.0 | 3.68e-01 | 77.2% | 82.4% |
| 1bqbA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.57 | 40.0 | 3.32e-01 | 73.4% | 71.5% |
| 1wgxA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 32.0 | 3.36e-01 | 75.9% | 58.9% |
| 2c12A01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.55 | 42.0 | 3.64e-01 | 83.5% | 73.2% |
| 5z7cA01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.54 | 41.0 | 3.19e-01 | 81.0% | 38.6% |
| 1q2lA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.54 | 39.0 | 2.89e-01 | 77.2% | 41.7% |
| 1ym3A00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.52 | 42.0 | 3.17e-01 | 88.6% | 97.4% |
| 1cnt200 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 38.0 | 3.26e-01 | 79.7% | 80.8% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4320659 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.96 | 80.0 | 5.23e-01 | 86.1% | 100.0% |
| 4173589 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.96 | 78.0 | 5.17e-01 | 84.8% | 100.0% |
| 4087168 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.95 | 80.0 | 5.26e-01 | 87.3% | 100.0% |
| 3294582 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.91 | 79.0 | 5.20e-01 | 92.4% | 100.0% |
| 4111477 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.89 | 69.0 | 4.65e-01 | 81.0% | 100.0% |
| 4111525 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.89 | 65.0 | 4.40e-01 | 75.9% | 100.0% |
| 4343882 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.89 | 79.0 | 5.28e-01 | 94.9% | 100.0% |
| 4579167 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.88 | 80.0 | 5.43e-01 | 96.2% | 99.6% |
| 1311209 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.87 | 79.0 | 5.12e-01 | 94.9% | 92.5% |
| 4302955 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.87 | 76.0 | 5.08e-01 | 92.4% | 100.0% |
| 5057918 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.71 | 49.0 | 3.19e-01 | 70.9% | 20.6% |
| 3413696 | 1045.1.1.0 ↗ | alpha bundles › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 | 0.64 | 44.0 | 4.28e-01 | 72.2% | 71.1% |
| 3231391 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.56 | 48.0 | 3.40e-01 | 94.9% | 92.9% |
| 3954673 | 5050.1.1.14 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › ATG22 | 0.55 | 40.0 | 3.09e-01 | 79.7% | 91.2% |
| 3229912 | 633.21.1.4 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › Cg6151-P | 0.53 | 38.0 | 3.31e-01 | 75.9% | 71.7% |