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CAKLQF020000033.1__CAH1095330.1__SAMEA5780031_03879__00001
Bact-VirCAKLQF020000033.1__CAH1095330.1__SAMEA5780031_03879__00001
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-111
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04828.23 best | GFA | 54.7 | 1.40e-14 | 99.1% | 87.0% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8ajqA01 | 3.90.1590.10 | Alpha Beta › Alpha-Beta Complex › glutathione-dependent formaldehyde- activating enzyme (gfa) › glutathione-dependent formaldehyde- activating enzyme (gfa) | 0.87 | 75.0 | 7.38e-01 | 100.0% | 85.2% |
| 3facA00 | 2.170.150.70 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › | 0.87 | 82.0 | 8.24e-01 | 99.1% | 100.0% |
| 1x6mC00 | 3.90.1590.10 | Alpha Beta › Alpha-Beta Complex › glutathione-dependent formaldehyde- activating enzyme (gfa) › glutathione-dependent formaldehyde- activating enzyme (gfa) | 0.80 | 74.0 | 6.05e-01 | 100.0% | 59.3% |
| 5amhA00 | 2.170.150.20 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. | 0.63 | 53.0 | 5.40e-01 | 90.9% | 96.2% |
| 7by6B04 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 48.0 | 3.85e-01 | 90.0% | 96.5% |
| 4fpwB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 43.0 | 3.89e-01 | 83.6% | 98.8% |
| 2d0bA01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.54 | 35.0 | 3.87e-01 | 70.0% | 82.0% |
| 4wiwA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.54 | 28.0 | 3.40e-01 | 72.7% | 78.3% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.53 | 40.0 | 3.12e-01 | 79.1% | 80.4% |
| 4z48A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.52 | 39.0 | 3.08e-01 | 80.0% | 80.4% |
| 2mhgA00 | 2.20.130.30 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › Protein of unknown function DUF2782 | 0.52 | 31.0 | 3.69e-01 | 93.6% | 88.0% |
| 4mxtA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.51 | 40.0 | 3.37e-01 | 82.7% | 78.1% |
| 3v8uA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 33.0 | 3.60e-01 | 73.6% | 80.0% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4016513 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.93 | 81.0 | 8.56e-01 | 96.4% | 100.0% |
| 3253357 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.93 | 89.0 | 8.30e-01 | 100.0% | 96.9% |
| 3276483 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.93 | 89.0 | 8.11e-01 | 100.0% | 85.5% |
| 4015090 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.92 | 89.0 | 7.72e-01 | 100.0% | 80.5% |
| 3185022 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.92 | 89.0 | 7.73e-01 | 100.0% | 92.8% |
| 4023542 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.91 | 88.0 | 7.87e-01 | 100.0% | 92.4% |
| 3181910 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.91 | 88.0 | 8.03e-01 | 100.0% | 92.6% |
| 3180069 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.91 | 88.0 | 7.94e-01 | 100.0% | 93.6% |
| 4014983 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.91 | 88.0 | 8.33e-01 | 100.0% | 92.0% |
| 4013994 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.91 | 84.0 | 8.31e-01 | 96.4% | 100.0% |
| 3736867 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.90 | 87.0 | 7.65e-01 | 100.0% | 83.2% |
| 4015524 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.90 | 84.0 | 8.47e-01 | 100.0% | 98.2% |
| 3524854 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.90 | 85.0 | 7.69e-01 | 100.0% | 77.1% |
| 3734367 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.90 | 86.0 | 8.47e-01 | 100.0% | 99.1% |
| 3336297 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.89 | 85.0 | 8.21e-01 | 100.0% | 90.8% |
| 3722133 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.88 | 84.0 | 7.97e-01 | 100.0% | 96.0% |
| 3980218 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.87 | 82.0 | 7.81e-01 | 99.1% | 87.2% |
| 353673 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.86 | 80.0 | 8.15e-01 | 98.2% | 100.0% |
| 3968118 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.86 | 78.0 | 7.29e-01 | 98.2% | 80.8% |
| 4015558 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.86 | 81.0 | 6.93e-01 | 100.0% | 71.3% |
| 3730692 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.84 | 79.0 | 7.24e-01 | 100.0% | 85.7% |
| 3690375 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.84 | 80.0 | 7.24e-01 | 100.0% | 88.6% |
| 3179640 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.84 | 79.0 | 7.21e-01 | 100.0% | 80.7% |
| 3689391 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.84 | 78.0 | 7.20e-01 | 100.0% | 81.9% |
| 3722582 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.83 | 78.0 | 7.24e-01 | 100.0% | 82.2% |
| 3969749 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.83 | 78.0 | 7.46e-01 | 100.0% | 88.0% |
| 3970700 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.83 | 76.0 | 7.23e-01 | 98.2% | 85.2% |
| 3632159 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.83 | 78.0 | 6.77e-01 | 100.0% | 90.6% |
| 3637989 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.83 | 71.0 | 7.43e-01 | 90.0% | 99.0% |
| 3744188 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.82 | 75.0 | 6.92e-01 | 100.0% | 78.5% |
| 3725577 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.82 | 77.0 | 7.01e-01 | 100.0% | 83.6% |
| 3732875 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.82 | 77.0 | 7.14e-01 | 100.0% | 83.6% |
| 3721465 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.82 | 76.0 | 6.72e-01 | 100.0% | 72.0% |
| 3188595 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.81 | 75.0 | 6.28e-01 | 100.0% | 81.1% |
| 3180068 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.80 | 73.0 | 7.08e-01 | 95.5% | 99.2% |
| 3734654 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.79 | 75.0 | 7.14e-01 | 100.0% | 90.4% |
| 3195759 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.79 | 74.0 | 6.70e-01 | 100.0% | 77.8% |
| 3507867 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.78 | 66.0 | 6.68e-01 | 90.0% | 91.8% |
| 3606305 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.64 | 46.0 | 4.48e-01 | 90.0% | 67.5% |
| 3196091 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.64 | 54.0 | 5.50e-01 | 90.9% | 99.0% |
| 3832475 | 708.1.2.2 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › SelR | 0.63 | 47.0 | 4.43e-01 | 90.0% | 64.4% |
| 4948768 | 708.1.2.2 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › SelR | 0.63 | 45.0 | 4.97e-01 | 87.3% | 96.5% |
| 4269713 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.62 | 26.0 | 3.70e-01 | 80.0% | 88.9% |
| 3594264 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.62 | 45.0 | 4.40e-01 | 90.0% | 69.7% |
| 4024862 | 708.1.2.11 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › STEEP1 | 0.60 | 49.0 | 4.90e-01 | 90.0% | 86.1% |
| 4205352 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.56 | 25.0 | 3.35e-01 | 80.0% | 84.0% |
| 3452728 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.51 | 36.0 | 2.99e-01 | 72.7% | 91.7% |