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CAKLQF020000034.1__CAH1095546.1__SAMEA5780031_03909__00002

Bact-Vir

CAKLQF020000034.1__CAH1095546.1__SAMEA5780031_03909__00002

Identity

Kingdom:
phage

Quality

96.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-170
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00962.29 best A_deaminase 158.9 2.50e-46 96.5% 49.7%
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fkwA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.92 89.0 6.75e-01 100.0% 51.3%
3paoB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.91 84.0 6.64e-01 100.0% 52.2%
4gxwB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.87 82.0 6.20e-01 100.0% 46.2%
2amxB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.85 80.0 6.10e-01 98.8% 51.7%
4cqbA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.78 61.0 4.92e-01 95.9% 45.5%
5macA02 3.20.20.110 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.74 47.0 3.72e-01 97.1% 32.4%
4ovxA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.67 47.0 3.99e-01 100.0% 44.8%
2q09A02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.66 57.0 4.63e-01 96.5% 51.2%
1t9hA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 34.0 3.65e-01 96.5% 56.8%
6sj3B01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.62 54.0 4.31e-01 95.9% 48.4%
6hq7B02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.62 47.0 4.12e-01 95.9% 51.9%
1itxA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 54.0 4.25e-01 95.3% 60.7%
6m4eA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.59 52.0 3.61e-01 92.9% 48.4%
3q71A00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.59 50.0 4.75e-01 90.6% 80.8%
4re2A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.58 52.0 3.76e-01 97.1% 88.0%
1ur4A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.57 53.0 4.05e-01 100.0% 47.2%
3rq1A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.57 45.0 4.06e-01 96.5% 59.0%
3tc3B00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.57 46.0 3.84e-01 97.1% 49.7%
1vffA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.57 51.0 3.80e-01 96.5% 50.6%
5ailA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.57 49.0 4.86e-01 92.4% 93.3%
2oodA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.56 51.0 4.13e-01 99.4% 52.0%
2i9uA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.56 51.0 4.20e-01 99.4% 54.9%
3e0lA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.56 51.0 4.19e-01 99.4% 54.7%
3c5cB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 46.0 4.64e-01 99.4% 88.0%
1pbgA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.56 49.0 3.58e-01 94.7% 76.0%
2vg0A00 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.56 41.0 3.79e-01 100.0% 57.7%
4emyA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.56 44.0 3.94e-01 96.5% 59.2%
1myrA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.55 50.0 3.60e-01 98.8% 89.2%
4d86A01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.55 48.0 4.65e-01 92.4% 94.1%
1yd9B00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.55 47.0 4.61e-01 90.6% 85.0%
3gpgA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.55 45.0 4.62e-01 90.6% 89.5%
3l49A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 35.0 3.96e-01 95.3% 82.9%
3v2bA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.55 48.0 4.78e-01 92.9% 92.0%
1t7lA02 3.20.20.210 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.55 49.0 3.81e-01 97.1% 45.9%
6ndsA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 44.0 3.62e-01 100.0% 47.5%
3p94A00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.54 49.0 4.61e-01 99.4% 80.4%
4nf7A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 48.0 3.75e-01 96.5% 63.1%
5e9fD01 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.54 49.0 3.68e-01 98.2% 63.8%
3slkA01 3.40.50.11460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 36.0 3.62e-01 98.8% 65.5%
3a21B01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 50.0 4.12e-01 100.0% 58.7%
1kblA04 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.53 49.0 3.89e-01 100.0% 57.3%
4ee9A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 49.0 3.98e-01 100.0% 66.4%
3menB00 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.53 45.0 3.62e-01 93.5% 45.6%
4iqyB00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.53 47.0 4.35e-01 95.9% 95.9%
1cz1A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 49.0 3.70e-01 100.0% 54.8%
4k36B00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 43.0 3.41e-01 87.1% 67.0%
2wagA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 43.0 4.02e-01 94.7% 68.7%
4ry8A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 34.0 3.66e-01 99.4% 74.3%
4ydsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 40.0 3.70e-01 97.6% 60.6%
4w7wA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 48.0 3.93e-01 100.0% 68.7%
2qiwA01 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.52 47.0 4.25e-01 98.2% 78.8%
5mn7A01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.52 45.0 4.56e-01 95.9% 95.2%
2exxA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 45.0 4.24e-01 97.6% 76.8%
3d3aA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 47.0 4.02e-01 98.2% 86.9%
2xn1A02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 47.0 3.85e-01 100.0% 62.2%
6ebqA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.52 36.0 3.93e-01 95.3% 86.2%
3h7aA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 47.0 4.39e-01 99.4% 88.7%
2hxsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 44.0 4.34e-01 100.0% 86.0%
3lyeA00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.51 46.0 3.91e-01 98.8% 64.6%
2wmfA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 44.0 3.55e-01 94.7% 51.3%
2c54A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 42.0 4.09e-01 95.3% 80.3%
2xitA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 45.0 3.83e-01 96.5% 76.8%
1g01A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 46.0 3.62e-01 100.0% 61.6%
5f5nA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 45.0 3.76e-01 95.9% 62.3%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2429380 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 1.00 98.0 7.48e-01 100.0% 50.9%
None 1.00 98.0 7.49e-01 100.0% 51.5%
None 0.94 91.0 6.97e-01 100.0% 50.7%
4079413 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.93 90.0 6.88e-01 100.0% 50.4%
4141504 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.92 90.0 6.92e-01 100.0% 51.5%
3268198 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.92 90.0 6.72e-01 100.0% 48.1%
135966 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.92 89.0 6.68e-01 100.0% 49.9%
4538725 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.92 89.0 6.75e-01 100.0% 50.6%
3923050 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.91 88.0 6.48e-01 100.0% 48.1%
4565407 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.91 85.0 6.49e-01 100.0% 47.1%
4683196 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.90 87.0 6.67e-01 100.0% 50.6%
3954215 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.90 86.0 6.48e-01 100.0% 48.5%
326689 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.89 85.0 6.39e-01 98.8% 53.3%
None 0.89 83.0 6.41e-01 100.0% 49.3%
None 0.89 85.0 6.49e-01 100.0% 50.3%
3474367 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.89 83.0 6.39e-01 98.2% 48.4%
None 0.88 85.0 6.43e-01 100.0% 48.7%
None 0.88 79.0 6.24e-01 98.8% 49.7%
3593278 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.88 84.0 6.43e-01 100.0% 50.9%
3283326 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.87 83.0 6.38e-01 100.0% 49.4%
4060003 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.87 80.0 6.26e-01 100.0% 49.8%
None 0.87 83.0 6.40e-01 100.0% 49.6%
3693379 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.87 83.0 6.33e-01 100.0% 48.3%
989855 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.87 82.0 6.20e-01 100.0% 46.2%
4609205 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.87 83.0 6.32e-01 100.0% 47.9%
3184110 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.87 83.0 6.05e-01 100.0% 51.1%
4886255 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.86 80.0 6.18e-01 100.0% 47.8%
4597664 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.86 81.0 6.22e-01 100.0% 48.4%
3842905 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.86 81.0 6.16e-01 100.0% 47.3%
3211998 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.85 79.0 6.07e-01 100.0% 47.8%
3268194 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.85 81.0 5.99e-01 100.0% 48.9%
3481070 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.85 78.0 6.04e-01 100.0% 48.2%
4116051 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.83 79.0 6.10e-01 100.0% 50.4%
3796702 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.83 79.0 5.93e-01 100.0% 48.0%
3199933 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.83 79.0 5.98e-01 100.0% 53.3%
4316609 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.82 71.0 5.69e-01 100.0% 49.2%
3797686 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.81 78.0 5.69e-01 100.0% 44.1%
3659127 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.81 77.0 5.90e-01 100.0% 47.9%
3627679 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.81 77.0 5.63e-01 100.0% 43.8%
4183706 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.80 76.0 5.95e-01 100.0% 51.6%
3411959 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.73 59.0 4.46e-01 98.2% 37.6%
3878533 2002.1.1.274 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 0.72 58.0 4.42e-01 98.2% 38.6%
4020523 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.71 59.0 4.46e-01 98.8% 38.7%
3721616 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.71 59.0 4.38e-01 98.8% 36.5%
3585293 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.63 42.0 4.03e-01 98.8% 57.4%
3601536 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 48.0 4.92e-01 92.9% 81.8%
4210625 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.62 56.0 4.01e-01 100.0% 59.6%
3981003 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.61 43.0 3.52e-01 99.4% 37.8%
4276454 2002.1.1.266 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF27526 0.59 55.0 4.05e-01 100.0% 49.2%
4668782 2002.1.1.151 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_53 0.59 52.0 3.92e-01 95.3% 42.8%
3214156 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.58 52.0 4.04e-01 95.3% 47.3%
3575380 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.58 49.0 4.94e-01 95.3% 90.6%
3624689 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.58 49.0 4.01e-01 95.3% 50.0%
8846 2002.1.1.151 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_53 0.57 53.0 4.05e-01 100.0% 47.2%
1837559 7577.1.1.1 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 0.57 45.0 3.83e-01 96.5% 49.8%
2524029 2002.1.1.112 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_114 0.57 52.0 4.58e-01 100.0% 78.9%
3672327 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.56 41.0 4.37e-01 98.8% 85.3%
3228366 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.56 48.0 4.05e-01 100.0% 54.5%
1501440 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.56 48.0 4.76e-01 92.4% 92.3%
5009059 2002.1.1.57 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D 0.56 50.0 4.05e-01 100.0% 82.0%
3885538 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.55 48.0 4.83e-01 92.9% 94.3%
4932185 2002.1.1.164 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MtaB 0.55 50.0 3.57e-01 97.1% 41.1%
3397441 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.55 50.0 3.86e-01 100.0% 45.5%
4934628 2002.1.1.164 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MtaB 0.54 50.0 3.58e-01 97.1% 40.2%
3193018 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 48.0 4.19e-01 99.4% 91.2%
3923486 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.53 47.0 3.68e-01 100.0% 44.9%
None 0.53 47.0 3.69e-01 97.1% 68.6%
5068507 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.53 48.0 4.57e-01 100.0% 89.0%
4956962 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.52 46.0 3.89e-01 100.0% 58.2%
3969670 2004.1.1.305 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IcmF-related_N 0.51 46.0 3.96e-01 100.0% 67.6%
4929229 2002.1.1.232 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 0.51 45.0 4.04e-01 94.7% 94.8%
D2 medium residues 226-329
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00962.29 best A_deaminase 107.8 8.60e-31 100.0% 31.2%
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3paoB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.94 82.0 5.54e-01 89.4% 29.6%
2amxB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.92 88.0 5.82e-01 100.0% 29.2%
3lgdA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.91 86.0 5.38e-01 100.0% 22.4%
1fkwA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.89 84.0 5.62e-01 100.0% 29.8%
2a3lA01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.87 82.0 5.05e-01 100.0% 22.7%
4gxwB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.87 82.0 5.42e-01 100.0% 29.4%
6sj3B01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.78 65.0 4.48e-01 87.5% 31.4%
3ooqA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.76 63.0 4.50e-01 95.2% 32.0%
2r8cA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.74 65.0 4.60e-01 95.2% 35.9%
4cqbA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.73 64.0 4.53e-01 95.2% 34.6%
3etkA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.70 63.0 4.56e-01 98.1% 38.0%
1ymyB02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.67 58.0 4.37e-01 94.2% 40.4%
1xrtA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.66 56.0 4.22e-01 98.1% 37.7%
2ap9B00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.64 53.0 3.84e-01 89.4% 64.7%
1d4oA00 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.60 46.0 3.92e-01 88.5% 48.6%
3bleA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 51.0 3.67e-01 97.1% 45.9%
3oqiA00 3.40.50.11710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase 0.57 47.0 3.75e-01 91.3% 82.9%
1r9dA01 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.56 49.0 2.98e-01 100.0% 46.5%
1wcwA01 3.40.50.10090 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 43.0 4.11e-01 82.7% 99.2%
2yweA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 47.0 4.10e-01 94.2% 61.1%
5e7qA01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.55 48.0 3.28e-01 100.0% 85.3%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.54 30.0 3.43e-01 84.6% 71.8%
1m22A00 3.90.1300.10 Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain 0.54 47.0 3.09e-01 98.1% 90.1%
1q6oB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 47.0 3.76e-01 100.0% 67.9%
8balC01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 45.0 3.35e-01 100.0% 61.8%
3cerC01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 36.0 3.40e-01 72.1% 82.8%
1cxsA02 3.40.228.10 Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 0.51 41.0 3.20e-01 89.4% 76.8%
3u31A01 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.51 41.0 3.58e-01 89.4% 66.5%
1tyyA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.51 43.0 3.20e-01 97.1% 55.6%
5dmhB02 3.40.980.20 Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › Four-carbon acid sugar kinase, nucleotide binding domain 0.50 40.0 3.45e-01 88.5% 70.6%
3k6jA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 41.0 3.22e-01 88.5% 79.6%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None 0.97 95.0 6.31e-01 100.0% 31.5%
4538725 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.96 92.0 6.11e-01 100.0% 30.2%
4565407 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.94 87.0 5.74e-01 100.0% 28.6%
4023424 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.94 90.0 5.51e-01 100.0% 20.6%
3631882 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.94 90.0 5.47e-01 100.0% 19.8%
4384155 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.94 76.0 5.21e-01 84.6% 29.1%
4079413 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.94 90.0 6.00e-01 100.0% 31.0%
None 0.93 89.0 5.94e-01 100.0% 30.1%
3268198 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.93 89.0 5.88e-01 100.0% 28.9%
4060003 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.93 88.0 5.94e-01 100.0% 31.7%
3283326 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.92 89.0 5.92e-01 100.0% 30.6%
None 0.92 88.0 5.99e-01 100.0% 32.5%
326689 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.92 88.0 5.82e-01 100.0% 28.9%
4886255 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.92 88.0 5.82e-01 100.0% 29.9%
3954215 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.92 88.0 5.78e-01 100.0% 31.8%
3255314 2002.1.1.42 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase,A_deaminase_N 0.92 88.0 5.46e-01 100.0% 22.2%
3399226 2002.1.1.42 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase,A_deaminase_N 0.92 88.0 5.41e-01 100.0% 21.6%
3184110 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.92 88.0 5.64e-01 100.0% 25.7%
4316609 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.92 86.0 5.82e-01 100.0% 32.1%
3410696 2002.1.1.42 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase,A_deaminase_N 0.92 87.0 5.45e-01 100.0% 22.7%
3189590 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.92 87.0 5.26e-01 100.0% 18.4%
3405488 2002.1.1.42 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase,A_deaminase_N 0.91 87.0 5.42e-01 100.0% 22.7%
3474367 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.91 87.0 5.80e-01 100.0% 30.9%
3719151 2002.1.1.192 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AMP_deaminase 0.91 87.0 5.02e-01 100.0% 15.0%
3687246 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.91 87.0 5.74e-01 100.0% 28.9%
1240675 2002.1.1.42 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase,A_deaminase_N 0.91 87.0 5.39e-01 100.0% 22.4%
None 0.91 87.0 5.75e-01 100.0% 29.3%
4880627 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.91 79.0 5.28e-01 90.4% 29.1%
None 0.91 87.0 5.76e-01 100.0% 29.7%
4609205 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.91 87.0 5.76e-01 100.0% 29.3%
3923050 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.91 86.0 5.62e-01 100.0% 28.2%
None 0.91 86.0 5.80e-01 100.0% 31.0%
4141504 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.91 86.0 5.82e-01 100.0% 31.5%
None 0.91 86.0 5.80e-01 100.0% 31.0%
4183706 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.90 86.0 5.78e-01 100.0% 31.0%
4578190 2002.1.1.42 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase,A_deaminase_N 0.90 85.0 5.31e-01 100.0% 22.0%
3597913 2002.1.1.192 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AMP_deaminase 0.90 85.0 5.15e-01 100.0% 20.5%
4116051 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.90 85.0 5.72e-01 100.0% 30.3%
4683196 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.90 85.0 5.69e-01 100.0% 30.6%
3690990 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.89 85.0 5.13e-01 100.0% 21.9%
3772241 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.89 85.0 6.46e-01 100.0% 50.2%
None 0.89 84.0 5.12e-01 100.0% 22.3%
135966 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.89 84.0 5.60e-01 100.0% 29.0%
3481070 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.89 84.0 5.68e-01 100.0% 31.8%
3659127 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.89 84.0 5.62e-01 100.0% 30.1%
4597664 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.89 84.0 5.65e-01 100.0% 30.1%
3842905 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.89 84.0 5.59e-01 100.0% 30.7%
3693379 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.88 84.0 5.57e-01 100.0% 29.7%
3444489 2002.1.1.192 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AMP_deaminase 0.88 83.0 5.40e-01 100.0% 30.1%
4013691 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.87 83.0 5.07e-01 100.0% 23.3%
3199933 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.87 82.0 5.46e-01 100.0% 29.4%
989855 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.87 82.0 5.42e-01 100.0% 29.4%
3268194 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.86 81.0 5.28e-01 100.0% 26.6%
3211998 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.85 80.0 5.42e-01 100.0% 31.5%
3796702 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.82 76.0 5.06e-01 100.0% 29.9%
3615724 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.81 75.0 4.72e-01 100.0% 39.4%
4950332 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.80 74.0 5.00e-01 100.0% 29.9%
3171463 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.57 45.0 3.20e-01 85.6% 30.3%
4997382 7513.1.1.1 a/b three-layered sandwiches › CofD-like › CofD-like › CofD-like › CofD 0.56 46.0 3.32e-01 93.3% 33.3%
3266637 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.54 47.0 3.78e-01 100.0% 69.3%
4980490 2003.1.4.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain 0.52 41.0 3.11e-01 87.5% 68.1%