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CAKLQF020000034.1__CAH1095567.1__SAMEA5780031_03934__00023
Bact-VirCAKLQF020000034.1__CAH1095567.1__SAMEA5780031_03934__00023
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 49-77_122-182_194-221_289-313
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bumX00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.77 | 50.0 | 3.93e-01 | 88.8% | 33.2% |
| 3bryA00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.68 | 63.0 | 4.52e-01 | 98.6% | 85.6% |
| 4gf4A00 | 2.40.160.180 | Mainly Beta › Beta Barrel › Porin › Carbohydrate-selective porin OprB | 0.64 | 54.0 | 4.18e-01 | 89.5% | 45.5% |
| 5dl5A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.64 | 57.0 | 4.04e-01 | 95.8% | 63.0% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 28.0 | 3.38e-01 | 100.0% | 62.1% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 42.0 | 4.26e-01 | 93.0% | 68.1% |
| 1bh3A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.61 | 57.0 | 4.47e-01 | 100.0% | 62.6% |
| 7btxA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.60 | 53.0 | 4.01e-01 | 95.8% | 95.3% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.59 | 38.0 | 4.25e-01 | 93.0% | 83.5% |
| 6fokB01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.58 | 53.0 | 3.41e-01 | 98.6% | 55.5% |
| 1fw3A00 | 2.40.230.10 | Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 | 0.58 | 51.0 | 4.29e-01 | 97.9% | 62.0% |
| 3fhhA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.58 | 49.0 | 3.33e-01 | 90.2% | 33.8% |
| 8p97A01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.56 | 50.0 | 3.32e-01 | 98.6% | 54.9% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.55 | 50.0 | 3.26e-01 | 100.0% | 80.7% |
| 1pu4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.52 | 45.0 | 3.22e-01 | 92.3% | 75.9% |
| 1em2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 42.0 | 3.67e-01 | 95.8% | 57.5% |
| 1d6uA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.51 | 43.0 | 3.11e-01 | 91.6% | 76.6% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3971028 | 5084.5.4.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X | 0.95 | 93.0 | 6.04e-01 | 100.0% | 47.9% |
| 3706756 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.77 | 52.0 | 4.14e-01 | 89.5% | 36.0% |
| 2799093 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.73 | 48.0 | 3.74e-01 | 88.8% | 32.3% |
| 3405242 | 5084.5.1.37 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C | 0.72 | 54.0 | 4.89e-01 | 89.5% | 59.6% |
| 4873102 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.71 | 49.0 | 5.13e-01 | 87.4% | 76.9% |
| 3385986 | 5084.3.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta | 0.69 | 47.0 | 4.19e-01 | 89.5% | 49.5% |
| 3761947 | 5084.5.1.33 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DNAJC11_beta-barrel | 0.68 | 56.0 | 4.35e-01 | 89.5% | 42.4% |
| 2392665 | 5084.1.1.12 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Porin_7 | 0.67 | 51.0 | 5.61e-01 | 89.5% | 95.7% |
| 3976326 | 5084.3.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta | 0.64 | 53.0 | 4.86e-01 | 88.8% | 68.3% |
| 4196334 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.62 | 51.0 | 3.38e-01 | 88.1% | 31.6% |
| 2103480 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.62 | 58.0 | 4.51e-01 | 100.0% | 90.4% |
| 3968806 | 5084.5.1.68 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF27733 | 0.61 | 57.0 | 5.00e-01 | 100.0% | 91.3% |
| 1298172 | 5084.5.1.8 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM | 0.61 | 54.0 | 5.08e-01 | 100.0% | 78.4% |
| 4296505 | 5084.5.1.52 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › SlpA_C | 0.59 | 48.0 | 3.57e-01 | 89.5% | 35.9% |
| 4255354 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.59 | 54.0 | 3.87e-01 | 100.0% | 68.0% |
| 3273993 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.57 | 52.0 | 4.17e-01 | 95.8% | 95.3% |
| 4083193 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.55 | 46.0 | 3.08e-01 | 89.5% | 41.1% |
| 4188109 | 5084.5.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 | 0.55 | 51.0 | 3.87e-01 | 100.0% | 80.3% |
| 3399621 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.55 | 49.0 | 3.84e-01 | 96.5% | 64.7% |
| 4030444 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 39.0 | 4.36e-01 | 100.0% | 93.6% |
| 3409721 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.54 | 50.0 | 3.88e-01 | 98.6% | 63.1% |
| 3945018 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.54 | 49.0 | 3.55e-01 | 98.6% | 54.4% |
| 3935776 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 41.0 | 3.05e-01 | 87.4% | 33.2% |
| 3642603 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.51 | 47.0 | 3.66e-01 | 100.0% | 83.2% |
| 3623756 | 9.1.1.12 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd | 0.51 | 45.0 | 4.12e-01 | 93.0% | 86.3% |
D2
medium
residues 78-121_456-468_483-518_535-554
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t16A00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.64 | 60.0 | 3.92e-01 | 100.0% | 85.9% |
| 1i78B00 | 2.40.128.90 | Mainly Beta › Beta Barrel › Lipocalin › OMPT-like | 0.59 | 54.0 | 3.98e-01 | 99.1% | 95.1% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.57 | 36.0 | 3.29e-01 | 97.3% | 49.0% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 32.0 | 3.52e-01 | 97.3% | 71.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4285298 | 5084.1.1.29 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 | 0.56 | 50.0 | 4.23e-01 | 98.2% | 90.5% |
| 3975660 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.54 | 48.0 | 3.91e-01 | 98.2% | 93.9% |
| 1558583 | 5084.5.4.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › CymA | 0.53 | 50.0 | 3.54e-01 | 100.0% | 77.1% |
| 3972818 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.53 | 47.0 | 3.54e-01 | 97.3% | 84.1% |
| 2142704 | 331.15.1.1 ↗ | a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 › DUF1374 | 0.53 | 33.0 | 3.55e-01 | 98.2% | 74.0% |
| 4616211 | 5084.1.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpW | 0.51 | 45.0 | 3.87e-01 | 99.1% | 92.4% |
D3
medium
residues 183-193_222-288_314-376
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.71 | 28.0 | 4.30e-01 | 89.4% | 86.7% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.62 | 27.0 | 4.00e-01 | 89.4% | 98.2% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.61 | 28.0 | 3.81e-01 | 90.1% | 90.5% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.51 | 26.0 | 3.17e-01 | 95.0% | 76.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3971028 | 5084.5.4.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X | 0.87 | 84.0 | 5.50e-01 | 100.0% | 36.8% |
| 4464658 | 274.1.1.59 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGG | 0.66 | 29.0 | 3.26e-01 | 92.9% | 52.6% |
| 3737742 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.50 | 31.0 | 3.53e-01 | 95.7% | 80.7% |