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CAKLQF020000035.1__CAH1095876.1__SAMEA5780031_03941__00006
Bact-VirCAKLQF020000035.1__CAH1095876.1__SAMEA5780031_03941__00006
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-81
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08849.18 best | BrxA | 47.6 | 2.30e-12 | 100.0% | 34.8% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bhwA00 | 1.10.3540.10 | Mainly Alpha › Orthogonal Bundle › fold of a uncharacterized protein from magnetospirillum magneticum › uncharacterized protein from magnetospirillum magneticum domain | 0.93 | 81.0 | 5.64e-01 | 100.0% | 32.4% |
| 1uhsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 48.0 | 5.07e-01 | 84.4% | 92.6% |
| 4n6cB00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.62 | 47.0 | 3.46e-01 | 82.8% | 77.3% |
| 2olvB02 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.60 | 47.0 | 3.45e-01 | 87.5% | 43.2% |
| 2vk9A04 | 1.10.274.80 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › | 0.60 | 42.0 | 3.65e-01 | 75.0% | 51.9% |
| 5je8B02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.60 | 46.0 | 3.73e-01 | 85.9% | 85.2% |
| 3h2zA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.59 | 49.0 | 3.71e-01 | 98.4% | 50.6% |
| 3of4A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.57 | 49.0 | 3.50e-01 | 100.0% | 46.9% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 43.0 | 3.71e-01 | 79.7% | 73.2% |
| 2a2jA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 41.0 | 3.00e-01 | 81.2% | 98.5% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.56 | 43.0 | 4.05e-01 | 84.4% | 76.8% |
| 2n00A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.56 | 40.0 | 3.52e-01 | 76.6% | 50.5% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.55 | 36.0 | 3.60e-01 | 75.0% | 64.2% |
| 2fefA02 | 1.10.3920.10 | Mainly Alpha › Orthogonal Bundle › PA2201 C-terminal domain-like › PA2201 C-terminal domain-like | 0.53 | 42.0 | 3.27e-01 | 90.6% | 87.2% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.53 | 38.0 | 3.61e-01 | 75.0% | 85.3% |
| 8etcb01 | 1.20.120.1190 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.53 | 42.0 | 3.28e-01 | 89.1% | 80.1% |
| 3grlA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.51 | 41.0 | 2.39e-01 | 90.6% | 29.3% |
| 2d86A01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.51 | 35.0 | 2.96e-01 | 75.0% | 88.8% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185075 | 101.1.1.45 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BrxA | 0.94 | 80.0 | 7.72e-01 | 98.4% | 81.7% |
| 4954653 | 101.1.1.45 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BrxA | 0.87 | 72.0 | 7.04e-01 | 89.1% | 81.4% |
| 3588086 | 101.1.1.45 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BrxA | 0.82 | 70.0 | 7.02e-01 | 93.8% | 92.3% |
| 5032990 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.73 | 64.0 | 6.23e-01 | 100.0% | 92.9% |
| 4281410 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.71 | 60.0 | 6.06e-01 | 98.4% | 98.5% |
| 3313889 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 48.0 | 5.20e-01 | 81.2% | 96.0% |
| 5045542 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.64 | 50.0 | 3.61e-01 | 89.1% | 37.0% |
| 3617137 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 45.0 | 4.78e-01 | 82.8% | 89.1% |
| 3657034 | 101.1.17.20 ↗ | alpha arrays › HTH › HTH › FF domain › DUF4378 | 0.63 | 54.0 | 4.44e-01 | 98.4% | 82.5% |
| 3248091 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.62 | 54.0 | 4.95e-01 | 100.0% | 91.8% |
| 360221 | 509.1.1.3 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › USH1C_N | 0.60 | 44.0 | 4.19e-01 | 81.2% | 96.2% |
| 3257722 | 198.1.1.3 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 | 0.59 | 46.0 | 4.34e-01 | 93.8% | 69.4% |
| 3164037 | 3405.1.1.6 ↗ | alpha duplicates or obligate multimers › FkpA dimerization domain-like › FkpA dimerization domain-like › FkpA dimerization domain-like › PF29764 | 0.59 | 49.0 | 4.01e-01 | 100.0% | 85.2% |
| 4807989 | 4982.2.1.0 ↗ | alpha arrays › KaiA/RbsU domain-like › Mitochondrial 54S ribosomal protein L8 C-terminal domain › Mitochondrial 54S ribosomal protein L8 C-terminal domain | 0.59 | 47.0 | 4.75e-01 | 90.6% | 90.9% |
| 3738138 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.58 | 46.0 | 3.42e-01 | 87.5% | 61.8% |
| 3765815 | 515.1.1.1 ↗ | alpha arrays › Transcription factor STAT-4 N-domain › Transcription factor STAT-4 N-domain › Transcription factor STAT-4 N-domain › STAT_int | 0.58 | 51.0 | 4.15e-01 | 100.0% | 70.0% |
| 3839655 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.55 | 46.0 | 3.19e-01 | 100.0% | 56.8% |
| 3599199 | 601.30.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 | 0.54 | 39.0 | 3.03e-01 | 78.1% | 96.1% |
| 3471120 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.54 | 39.0 | 3.92e-01 | 76.6% | 80.0% |
| 3618803 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 42.0 | 4.32e-01 | 98.4% | 98.3% |
| 3714315 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 38.0 | 3.35e-01 | 85.9% | 73.3% |
D2
high
residues 96-197
Domain cluster:
rep: IMGVR_UViG_3300021540_000078-3300021540-Ga0214517_1003185__D94-176_186-197
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08849.18 best | BrxA | 77.5 | 1.60e-21 | 91.2% | 49.5% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cf7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 52.0 | 5.66e-01 | 79.4% | 96.3% |
| 2pjpA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 42.0 | 5.15e-01 | 77.5% | 100.0% |
| 2ph7A01 | 1.10.3400.10 | Mainly Alpha › Orthogonal Bundle › af_2093 domain like fold › af_2093 domain like | 0.64 | 46.0 | 4.34e-01 | 78.4% | 62.1% |
| 7jgsG02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 50.0 | 5.16e-01 | 97.1% | 94.9% |
| 5n1qB02 | 3.30.70.470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 37.0 | 3.35e-01 | 71.6% | 89.8% |
| 2f33A03 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.53 | 40.0 | 4.26e-01 | 99.0% | 95.4% |
| 2guzA00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.50 | 29.0 | 3.33e-01 | 100.0% | 80.3% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2900282 | 101.1.2.99 ↗ | alpha arrays › HTH › HTH › winged helix domain › BrxA | 0.96 | 92.0 | 8.47e-01 | 100.0% | 81.6% |
| 332620 | 101.1.2.99 ↗ | alpha arrays › HTH › HTH › winged helix domain › BrxA | 0.92 | 89.0 | 8.18e-01 | 100.0% | 82.3% |
| 3588087 | 101.1.2.99 ↗ | alpha arrays › HTH › HTH › winged helix domain › BrxA | 0.90 | 84.0 | 7.88e-01 | 99.0% | 85.0% |
| 4954654 | 101.1.2.99 ↗ | alpha arrays › HTH › HTH › winged helix domain › BrxA | 0.89 | 84.0 | 7.93e-01 | 100.0% | 85.8% |
| 4419377 | 101.1.2.99 ↗ | alpha arrays › HTH › HTH › winged helix domain › BrxA | 0.89 | 84.0 | 7.78e-01 | 100.0% | 82.4% |
| 3984604 | 7558.1.1.10 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › GPAT_C | 0.69 | 54.0 | 5.59e-01 | 100.0% | 89.5% |
| 4560206 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.69 | 54.0 | 5.76e-01 | 99.0% | 95.6% |
| 3649101 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 49.0 | 4.99e-01 | 99.0% | 77.0% |
| 4600309 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.65 | 50.0 | 5.08e-01 | 100.0% | 84.0% |
| 4935180 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.64 | 47.0 | 4.82e-01 | 95.1% | 80.0% |
| 3664902 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.62 | 35.0 | 3.56e-01 | 79.4% | 55.0% |
| 3743932 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.61 | 38.0 | 4.25e-01 | 98.0% | 80.0% |
| 4999336 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.61 | 45.0 | 4.84e-01 | 95.1% | 92.9% |
| 4943661 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.59 | 41.0 | 3.31e-01 | 72.5% | 86.2% |
| 4223134 | 101.8.1.2 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 | 0.56 | 44.0 | 3.76e-01 | 99.0% | 51.8% |
| 3378555 | 4133.1.1.2 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Tic110 | 0.52 | 37.0 | 3.06e-01 | 73.5% | 50.8% |