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CAKLQF020000035.1__CAH1095892.1__SAMEA5780031_03949__00014
Bact-VirCAKLQF020000035.1__CAH1095892.1__SAMEA5780031_03949__00014
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-59_99-207
Domain cluster:
representative
D2
medium
residues 1-20_60-98_212-266
Domain cluster:
rep: NC_018843.1__YP_006906669.1__SSU5_037__00037__D1-35_106-149_187-252
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11185.14 best | DUF2971 | 28.5 | 4.50e-06 | 70.2% | 46.1% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.65 | 41.0 | 4.51e-01 | 100.0% | 78.0% |
| 2zyzB02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.62 | 42.0 | 4.51e-01 | 100.0% | 82.1% |
| 2zyzC00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.62 | 38.0 | 4.11e-01 | 100.0% | 72.9% |
| 3hy3A00 | 3.40.50.10420 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NagB/RpiA/CoA transferase-like | 0.60 | 37.0 | 3.09e-01 | 93.0% | 34.7% |
| 1ydmB00 | 3.40.50.10420 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NagB/RpiA/CoA transferase-like | 0.59 | 36.0 | 3.09e-01 | 92.1% | 36.8% |
| 2w00A01 | 3.90.1570.50 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.57 | 37.0 | 3.24e-01 | 100.0% | 43.9% |
| 3v42A01 | 3.40.50.12430 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 33.0 | 3.32e-01 | 100.0% | 58.1% |
| 2zvbA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.54 | 38.0 | 3.71e-01 | 100.0% | 65.6% |
| 4dapA02 | 3.40.1350.60 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.51 | 43.0 | 3.94e-01 | 99.1% | 68.4% |
| 3fovA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.51 | 38.0 | 3.96e-01 | 99.1% | 86.3% |
| 2x5nA01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.51 | 43.0 | 3.78e-01 | 94.7% | 73.7% |
| 1y4uB01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.50 | 42.0 | 3.54e-01 | 92.1% | 93.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3244571 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.70 | 45.0 | 4.94e-01 | 100.0% | 81.1% |
| 3249181 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.67 | 44.0 | 4.93e-01 | 98.2% | 84.4% |
| 3625561 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.66 | 45.0 | 4.75e-01 | 100.0% | 78.0% |
| 4956652 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.66 | 44.0 | 4.76e-01 | 100.0% | 81.7% |
| 3598626 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.65 | 43.0 | 4.71e-01 | 99.1% | 83.3% |
| 5010105 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.61 | 44.0 | 4.25e-01 | 100.0% | 67.2% |
| 3894384 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.56 | 26.0 | 3.20e-01 | 78.1% | 67.1% |
| 5011559 | 2003.1.5.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 | 0.53 | 34.0 | 2.69e-01 | 94.7% | 27.9% |
| 4486867 | 3351.1.1.0 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 | 0.51 | 38.0 | 4.02e-01 | 80.7% | 88.0% |
| 4072844 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 34.0 | 2.66e-01 | 97.4% | 29.2% |
| 4338458 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 34.0 | 2.44e-01 | 89.5% | 21.8% |
| 3181219 | 207.1.1.243 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › DUF7730 | 0.51 | 47.0 | 3.80e-01 | 100.0% | 56.2% |