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CAKLQF020000038.1__CAH1096317.1__SAMEA5780031_03995__00008
Bact-VirCAKLQF020000038.1__CAH1096317.1__SAMEA5780031_03995__00008
Identity
- Kingdom:
- phage
Quality
96.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-18_226-290_400-411
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00275.26 best | EPSP_synthase | 50.9 | 1.40e-13 | 96.8% | 19.9% |
CATH (59)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ejdA01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.95 | 93.0 | 6.81e-01 | 100.0% | 96.1% |
| 1q36A01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.83 | 78.0 | 5.91e-01 | 100.0% | 98.5% |
| 2o0bA01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.83 | 77.0 | 5.82e-01 | 100.0% | 99.5% |
| 4fqdA01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.81 | 75.0 | 5.65e-01 | 100.0% | 94.9% |
| 4fqdB02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.78 | 63.0 | 4.78e-01 | 86.3% | 45.4% |
| 2yvwA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.77 | 64.0 | 4.85e-01 | 87.4% | 40.3% |
| 1ejcA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.76 | 62.0 | 4.75e-01 | 87.4% | 40.9% |
| 7m0oA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.76 | 62.0 | 4.92e-01 | 87.4% | 45.7% |
| 4n3pA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.75 | 61.0 | 4.66e-01 | 87.4% | 55.7% |
| 2o0bA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.74 | 60.0 | 4.57e-01 | 87.4% | 50.7% |
| 3douA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.71 | 57.0 | 4.66e-01 | 86.3% | 60.6% |
| 2plwA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.70 | 55.0 | 4.49e-01 | 86.3% | 59.9% |
| 2nyuB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.69 | 54.0 | 4.42e-01 | 85.3% | 54.9% |
| 3zieD00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.69 | 49.0 | 5.27e-01 | 74.7% | 90.2% |
| 2pcrA02 | 3.40.190.80 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.69 | 49.0 | 4.62e-01 | 74.7% | 83.5% |
| 1qmhA01 | 3.65.10.20 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain | 0.68 | 54.0 | 4.09e-01 | 87.4% | 59.8% |
| 4atnA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 54.0 | 4.37e-01 | 85.3% | 54.4% |
| 5zhhA02 | 3.40.190.80 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.67 | 49.0 | 4.56e-01 | 75.8% | 84.7% |
| 2qm3A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 49.0 | 3.73e-01 | 83.2% | 54.4% |
| 1dcjA00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.63 | 45.0 | 4.86e-01 | 75.8% | 91.4% |
| 3grzB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 49.0 | 3.92e-01 | 84.2% | 54.4% |
| 2nxcA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 47.0 | 4.07e-01 | 81.1% | 53.6% |
| 2dsiA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.62 | 45.0 | 3.83e-01 | 74.7% | 76.8% |
| 7qccA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 47.0 | 3.77e-01 | 81.1% | 58.9% |
| 4ylmX00 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.62 | 49.0 | 3.50e-01 | 84.2% | 93.1% |
| 4fpvB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.62 | 51.0 | 3.78e-01 | 91.6% | 95.7% |
| 5c0oH00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 48.0 | 3.76e-01 | 85.3% | 49.3% |
| 5hsxB00 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.61 | 44.0 | 3.21e-01 | 76.8% | 87.1% |
| 1xxlA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 48.0 | 3.65e-01 | 86.3% | 79.9% |
| 4lecA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 48.0 | 3.78e-01 | 85.3% | 47.5% |
| 7vkkB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 48.0 | 3.67e-01 | 87.4% | 36.8% |
| 3nutB02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.60 | 42.0 | 3.88e-01 | 74.7% | 79.7% |
| 3cjsA00 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.59 | 33.0 | 4.09e-01 | 87.4% | 91.4% |
| 2wmfA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 44.0 | 3.09e-01 | 82.1% | 42.5% |
| 3ffyA00 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.58 | 41.0 | 3.93e-01 | 73.7% | 84.8% |
| 1nj8A03 | 3.30.110.30 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › C-terminal domain of ProRS | 0.58 | 37.0 | 4.34e-01 | 70.5% | 100.0% |
| 2mraA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.58 | 42.0 | 3.98e-01 | 76.8% | 86.3% |
| 5hfjC00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 48.0 | 3.87e-01 | 97.9% | 89.2% |
| 5bkeC00 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.56 | 44.0 | 3.19e-01 | 85.3% | 98.6% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.56 | 38.0 | 3.93e-01 | 71.6% | 90.2% |
| 3dmgA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 43.0 | 3.61e-01 | 86.3% | 49.7% |
| 4mtlA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 48.0 | 3.72e-01 | 95.8% | 78.4% |
| 1x19A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 43.0 | 3.69e-01 | 85.3% | 53.1% |
| 4qjvA03 | 3.30.70.3110 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 34.0 | 4.09e-01 | 89.5% | 96.8% |
| 3t66A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 39.0 | 2.90e-01 | 74.7% | 92.2% |
| 3pcoB04 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.55 | 33.0 | 3.71e-01 | 85.3% | 77.3% |
| 4p22A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 45.0 | 3.53e-01 | 93.7% | 88.8% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.54 | 38.0 | 3.31e-01 | 76.8% | 94.0% |
| 1y8qC00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 44.0 | 3.16e-01 | 93.7% | 86.5% |
| 5n6lA01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.52 | 41.0 | 3.00e-01 | 84.2% | 41.6% |
| 2b25A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 44.0 | 3.61e-01 | 94.7% | 87.4% |
| 6vudA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.52 | 37.0 | 4.08e-01 | 74.7% | 100.0% |
| 1nv8A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 43.0 | 3.49e-01 | 94.7% | 85.8% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.52 | 41.0 | 4.12e-01 | 84.2% | 96.8% |
| 6u9hF02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.51 | 34.0 | 3.74e-01 | 89.5% | 84.4% |
| 1npdB01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.51 | 37.0 | 3.36e-01 | 77.9% | 69.6% |
| 1dcoA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.51 | 38.0 | 3.79e-01 | 81.1% | 75.8% |
| 3bkwB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 43.0 | 3.37e-01 | 96.8% | 96.3% |
| 8k5lA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 42.0 | 3.37e-01 | 94.7% | 93.4% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4096218 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.96 | 76.0 | 5.39e-01 | 81.1% | 77.7% |
| 4149866 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.95 | 93.0 | 6.84e-01 | 100.0% | 97.6% |
| 3960518 | 328.6.1.0 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like | 0.93 | 87.0 | 6.50e-01 | 95.8% | 97.5% |
| 4249253 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.91 | 88.0 | 6.49e-01 | 100.0% | 96.7% |
| 4588030 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.91 | 87.0 | 6.32e-01 | 100.0% | 97.3% |
| 4421136 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.90 | 86.0 | 6.39e-01 | 100.0% | 96.7% |
| 4636764 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.89 | 86.0 | 6.37e-01 | 100.0% | 94.7% |
| 4591809 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.87 | 82.0 | 6.06e-01 | 100.0% | 94.5% |
| 5081543 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.86 | 80.0 | 5.97e-01 | 98.9% | 96.7% |
| 4095323 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.85 | 79.0 | 6.01e-01 | 98.9% | 100.0% |
| 4191375 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.85 | 79.0 | 5.91e-01 | 100.0% | 96.3% |
| 4102751 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.83 | 78.0 | 5.81e-01 | 100.0% | 95.4% |
| 4053779 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.83 | 77.0 | 5.81e-01 | 98.9% | 97.1% |
| 4170177 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.83 | 78.0 | 5.90e-01 | 98.9% | 99.0% |
| 4124120 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.83 | 76.0 | 5.53e-01 | 97.9% | 96.6% |
| 4364889 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.82 | 77.0 | 5.85e-01 | 98.9% | 100.0% |
| 4209830 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.81 | 75.0 | 5.39e-01 | 97.9% | 93.3% |
| 4014800 | 328.6.1.0 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like | 0.81 | 72.0 | 5.39e-01 | 95.8% | 95.9% |
| 4335480 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.80 | 74.0 | 5.68e-01 | 97.9% | 100.0% |
| 3172144 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.79 | 73.0 | 5.24e-01 | 98.9% | 95.9% |
| 4990558 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.78 | 70.0 | 5.39e-01 | 94.7% | 100.0% |
| 4666955 | 328.6.1.0 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like | 0.77 | 72.0 | 5.49e-01 | 98.9% | 98.0% |
| 4309889 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.77 | 71.0 | 5.42e-01 | 98.9% | 98.0% |
| 4526750 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.76 | 62.0 | 4.65e-01 | 87.4% | 39.1% |
| 5066286 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.76 | 69.0 | 5.26e-01 | 98.9% | 96.7% |
| 4412449 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.75 | 62.0 | 4.63e-01 | 87.4% | 55.5% |
| 3961181 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.75 | 62.0 | 4.60e-01 | 87.4% | 38.2% |
| 4131407 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.74 | 60.0 | 4.58e-01 | 87.4% | 51.6% |
| 4134856 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.74 | 60.0 | 4.63e-01 | 87.4% | 53.2% |
| 4068381 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.73 | 60.0 | 4.51e-01 | 87.4% | 39.1% |
| 4278886 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.73 | 59.0 | 4.50e-01 | 87.4% | 39.1% |
| 3229140 | 328.8.1.4 ↗ | a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 › PF29488 | 0.72 | 52.0 | 4.83e-01 | 75.8% | 90.0% |
| 4965344 | 328.9.1.4 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › DUF5779 | 0.72 | 50.0 | 5.50e-01 | 75.8% | 90.7% |
| 5032696 | 328.9.1.1 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF | 0.69 | 50.0 | 5.41e-01 | 75.8% | 93.8% |
| 5015326 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.69 | 46.0 | 5.34e-01 | 72.6% | 100.0% |
| 4497067 | 328.3.1.2 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › mIF3 | 0.68 | 50.0 | 5.12e-01 | 76.8% | 97.8% |
| 4965755 | 2007.1.9.12 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › PF30415 | 0.68 | 51.0 | 3.75e-01 | 80.0% | 36.4% |
| 4960237 | 328.9.1.1 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF | 0.68 | 50.0 | 5.04e-01 | 77.9% | 81.1% |
| 4963769 | 328.5.1.6 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › DUF2249 | 0.67 | 46.0 | 4.85e-01 | 71.6% | 83.3% |
| 4153650 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.66 | 59.0 | 4.63e-01 | 98.9% | 97.0% |
| 3958483 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.66 | 48.0 | 3.96e-01 | 75.8% | 59.1% |
| 4319701 | 2003.1.5.89 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Anamorsin_N | 0.65 | 49.0 | 4.59e-01 | 84.2% | 64.2% |
| 4986259 | 2003.1.5.55 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA | 0.65 | 49.0 | 3.89e-01 | 81.1% | 47.2% |
| 3608167 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.65 | 50.0 | 3.97e-01 | 83.2% | 80.4% |
| 3386910 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.65 | 45.0 | 5.00e-01 | 71.6% | 100.0% |
| 5042786 | 328.9.1.0 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain | 0.65 | 45.0 | 5.01e-01 | 71.6% | 98.6% |
| 5002789 | 328.9.1.3 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › OapB | 0.64 | 46.0 | 4.34e-01 | 74.7% | 86.1% |
| 3329753 | 2003.1.5.115 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29 | 0.63 | 48.0 | 3.93e-01 | 81.1% | 49.1% |
| 3463189 | 2003.1.5.115 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29 | 0.63 | 50.0 | 3.63e-01 | 85.3% | 34.1% |
| 3658629 | 101.1.2.630 ↗ | alpha arrays › HTH › HTH › winged helix domain › Methyltransf_29 | 0.63 | 50.0 | 4.48e-01 | 86.3% | 67.4% |
| None | — | 0.63 | 48.0 | 3.78e-01 | 83.2% | 39.5% | |
| 4932512 | 328.9.1.3 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › OapB | 0.63 | 44.0 | 4.24e-01 | 73.7% | 92.7% |
| 3791564 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.62 | 49.0 | 4.34e-01 | 86.3% | 59.3% |
| 4967025 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.62 | 43.0 | 3.65e-01 | 72.6% | 46.1% |
| 5054390 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.62 | 46.0 | 4.39e-01 | 80.0% | 88.7% |
| 200064 | 10.12.1.12 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › TauD | 0.62 | 48.0 | 3.48e-01 | 84.2% | 92.8% |
| 4994004 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.61 | 43.0 | 4.64e-01 | 72.6% | 97.3% |
| 3714235 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.61 | 51.0 | 3.74e-01 | 90.5% | 97.2% |
| 4494220 | 2003.1.5.55 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA | 0.61 | 46.0 | 3.56e-01 | 81.1% | 47.3% |
| None | — | 0.61 | 48.0 | 3.70e-01 | 85.3% | 37.6% | |
| 3461182 | 207.1.1.99 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At5g56370 | 0.61 | 47.0 | 3.19e-01 | 85.3% | 38.2% |
| 3579401 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 47.0 | 4.77e-01 | 85.3% | 87.4% |
| 5003344 | 2007.1.9.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › AIRC | 0.61 | 46.0 | 3.45e-01 | 81.1% | 35.3% |
| 3786773 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.60 | 45.0 | 4.06e-01 | 78.9% | 68.5% |
| 4677493 | 2003.1.5.293 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › NAD-bd_HRPKS_sdrA | 0.60 | 46.0 | 3.11e-01 | 82.1% | 27.8% |
| None | — | 0.59 | 45.0 | 3.71e-01 | 84.2% | 42.7% | |
| 3974070 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.59 | 42.0 | 3.80e-01 | 74.7% | 75.6% |
| 4491677 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.59 | 45.0 | 3.77e-01 | 83.2% | 58.8% |
| 4319036 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.59 | 44.0 | 3.77e-01 | 82.1% | 58.8% |
| 3609147 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.57 | 41.0 | 4.02e-01 | 74.7% | 79.0% |
| 3250003 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.57 | 32.0 | 3.93e-01 | 83.2% | 88.3% |
| 3633511 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.56 | 46.0 | 2.92e-01 | 93.7% | 93.4% |
| 4969028 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.56 | 43.0 | 3.61e-01 | 84.2% | 61.2% |
| 5029516 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.54 | 37.0 | 3.91e-01 | 71.6% | 84.7% |
| 5028586 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.53 | 43.0 | 3.31e-01 | 90.5% | 85.3% |
| None | — | 0.52 | 45.0 | 3.61e-01 | 96.8% | 76.4% | |
| 4361150 | 2003.1.5.55 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA | 0.52 | 44.0 | 3.39e-01 | 94.7% | 64.9% |
| 4968100 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.52 | 43.0 | 3.79e-01 | 94.7% | 96.7% |
| 4660380 | 2003.1.5.55 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA | 0.52 | 43.0 | 3.45e-01 | 94.7% | 74.5% |
| 4196168 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.51 | 39.0 | 3.76e-01 | 84.2% | 77.4% |
| 4017169 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.50 | 39.0 | 3.17e-01 | 85.3% | 96.3% |
| 3097830 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.50 | 42.0 | 3.38e-01 | 95.8% | 92.5% |
D2
medium
residues 151-225
Domain cluster:
rep: CAKLQF020000002.1__CAH1073507.1__SAMEA5780031_00538__00168__D461-526
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00275.26 best | EPSP_synthase | 61.7 | 7.80e-17 | 100.0% | 17.8% |
CATH (63)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ejcA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 1.00 | 97.0 | 6.68e-01 | 100.0% | 36.1% |
| 2yvwA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.95 | 89.0 | 6.21e-01 | 100.0% | 35.9% |
| 3slhA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.93 | 74.0 | 5.14e-01 | 82.7% | 31.0% |
| 1g6sA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.91 | 74.0 | 5.21e-01 | 85.3% | 33.8% |
| 4fqdB02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.90 | 85.0 | 5.87e-01 | 100.0% | 41.2% |
| 4n3pA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.90 | 71.0 | 4.95e-01 | 82.7% | 30.0% |
| 2o0bA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.86 | 80.0 | 5.59e-01 | 100.0% | 37.2% |
| 1rf6A01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.85 | 78.0 | 5.48e-01 | 100.0% | 37.3% |
| 7m0oA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.83 | 77.0 | 5.66e-01 | 100.0% | 41.8% |
| 2o0bA01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.83 | 76.0 | 5.41e-01 | 100.0% | 38.3% |
| 1ejdA01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.83 | 77.0 | 5.45e-01 | 100.0% | 36.7% |
| 1q36A01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.82 | 75.0 | 5.35e-01 | 100.0% | 38.0% |
| 3zieD00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.68 | 55.0 | 5.39e-01 | 90.7% | 89.0% |
| 3p04A00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.66 | 55.0 | 5.54e-01 | 94.7% | 96.1% |
| 3zihA00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.66 | 53.0 | 5.31e-01 | 90.7% | 88.6% |
| 3zigA00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.66 | 53.0 | 5.17e-01 | 90.7% | 91.5% |
| 2wk1A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 52.0 | 3.69e-01 | 92.0% | 31.0% |
| 3ogkH02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 52.0 | 3.20e-01 | 93.3% | 13.4% |
| 2grvA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.64 | 51.0 | 3.91e-01 | 88.0% | 84.5% |
| 8k1fC01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 50.0 | 3.82e-01 | 90.7% | 43.4% |
| 3dtnA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 50.0 | 3.88e-01 | 92.0% | 43.9% |
| 1pavA00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.62 | 50.0 | 4.96e-01 | 89.3% | 93.6% |
| 1je3A01 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.61 | 47.0 | 4.74e-01 | 85.3% | 100.0% |
| 2d9iA00 | 3.30.1370.110 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.61 | 49.0 | 4.58e-01 | 92.0% | 89.6% |
| 1o54A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 50.0 | 3.86e-01 | 97.3% | 49.2% |
| 2q4aA00 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.59 | 51.0 | 3.43e-01 | 98.7% | 95.0% |
| 2cxaA01 | 3.30.70.3550 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Leucyl/phenylalanyl-tRNA-protein transferase, N-terminal domain | 0.59 | 44.0 | 4.77e-01 | 86.7% | 100.0% |
| 5hsxB00 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.59 | 49.0 | 3.41e-01 | 96.0% | 86.7% |
| 1jo0A00 | 3.30.110.60 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › YhbY-like | 0.58 | 46.0 | 4.32e-01 | 90.7% | 74.2% |
| 1whvA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 36.0 | 3.31e-01 | 89.3% | 47.0% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 3.78e-01 | 77.3% | 69.5% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 43.0 | 3.90e-01 | 78.7% | 68.0% |
| 4dcmA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 48.0 | 3.81e-01 | 97.3% | 44.8% |
| 4mtlA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 47.0 | 3.57e-01 | 96.0% | 39.9% |
| 2xauA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 45.0 | 3.47e-01 | 88.0% | 51.9% |
| 1nj8A03 | 3.30.110.30 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › C-terminal domain of ProRS | 0.57 | 42.0 | 4.49e-01 | 82.7% | 98.4% |
| 4c5wA02 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.57 | 47.0 | 3.33e-01 | 98.7% | 90.6% |
| 2v1nA01 | 1.10.10.2030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain | 0.57 | 40.0 | 3.65e-01 | 73.3% | 73.3% |
| 3pcoB04 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.57 | 38.0 | 3.84e-01 | 96.0% | 69.3% |
| 2zvfA02 | 3.10.310.40 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.56 | 46.0 | 4.24e-01 | 96.0% | 70.8% |
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.56 | 39.0 | 3.57e-01 | 73.3% | 67.0% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 41.0 | 3.78e-01 | 80.0% | 71.2% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 41.0 | 3.70e-01 | 77.3% | 65.3% |
| 3fxtA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 44.0 | 4.19e-01 | 92.0% | 93.3% |
| 4y4mC00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 42.0 | 2.97e-01 | 94.7% | 25.1% |
| 6fopA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.55 | 43.0 | 3.14e-01 | 88.0% | 59.3% |
| 1rq8A00 | 3.30.110.60 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › YhbY-like | 0.54 | 42.0 | 4.00e-01 | 89.3% | 74.0% |
| 5jciA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 40.0 | 2.95e-01 | 80.0% | 41.2% |
| 4hkqA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.53 | 41.0 | 3.46e-01 | 88.0% | 75.0% |
| 2zfzD00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.53 | 38.0 | 3.79e-01 | 77.3% | 72.2% |
| 2i4lA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.53 | 42.0 | 2.86e-01 | 93.3% | 77.4% |
| 5ghrA02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.53 | 45.0 | 3.90e-01 | 100.0% | 71.2% |
| 2yhgA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 41.0 | 3.73e-01 | 89.3% | 66.4% |
| 4avaA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 44.0 | 3.44e-01 | 98.7% | 59.6% |
| 3hyiA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.52 | 44.0 | 3.34e-01 | 96.0% | 86.9% |
| 4zevA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.52 | 43.0 | 3.86e-01 | 92.0% | 96.3% |
| 1tuaA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 35.0 | 3.46e-01 | 92.0% | 64.3% |
| 2axyA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.51 | 36.0 | 3.67e-01 | 94.7% | 77.8% |
| 2qv6B02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.51 | 36.0 | 3.11e-01 | 74.7% | 84.4% |
| 1azsA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.50 | 36.0 | 2.79e-01 | 78.7% | 71.1% |
| 6lsvA01 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.50 | 41.0 | 2.82e-01 | 97.3% | 81.8% |
| 3pgvA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.50 | 41.0 | 3.78e-01 | 92.0% | 97.0% |
| 3ehgA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.50 | 41.0 | 3.55e-01 | 93.3% | 98.4% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3960517 | 328.6.1.0 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like | 1.00 | 97.0 | 6.64e-01 | 100.0% | 35.7% |
| 4663585 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.98 | 95.0 | 6.43e-01 | 100.0% | 34.1% |
| 4094762 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.98 | 94.0 | 6.48e-01 | 100.0% | 36.7% |
| 4090109 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.94 | 90.0 | 6.17e-01 | 100.0% | 34.9% |
| 4132928 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.89 | 73.0 | 5.01e-01 | 85.3% | 31.4% |
| 1852024 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.89 | 84.0 | 5.82e-01 | 100.0% | 40.8% |
| 4269299 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.87 | 81.0 | 5.73e-01 | 100.0% | 38.0% |
| 4584041 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.86 | 81.0 | 5.63e-01 | 100.0% | 35.3% |
| 4947686 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.86 | 80.0 | 5.59e-01 | 100.0% | 37.7% |
| 3961181 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.86 | 80.0 | 5.56e-01 | 100.0% | 36.4% |
| 4304156 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.86 | 71.0 | 4.95e-01 | 88.0% | 30.9% |
| 5028628 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.85 | 79.0 | 5.52e-01 | 100.0% | 36.4% |
| 5031649 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.85 | 79.0 | 5.54e-01 | 100.0% | 37.7% |
| 4484386 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.85 | 79.0 | 5.49e-01 | 100.0% | 36.8% |
| 4095323 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.85 | 79.0 | 5.57e-01 | 100.0% | 37.6% |
| 4515846 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.84 | 78.0 | 5.49e-01 | 100.0% | 37.7% |
| 4141629 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.84 | 78.0 | 5.47e-01 | 100.0% | 37.2% |
| 4364889 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.84 | 78.0 | 5.59e-01 | 100.0% | 38.5% |
| 4202302 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.84 | 78.0 | 5.48e-01 | 100.0% | 35.8% |
| 4364588 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.84 | 78.0 | 5.41e-01 | 100.0% | 55.6% |
| 4536664 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.84 | 78.0 | 5.44e-01 | 100.0% | 35.9% |
| 4191375 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.84 | 77.0 | 5.44e-01 | 100.0% | 36.7% |
| 4096786 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.84 | 77.0 | 5.40e-01 | 100.0% | 35.5% |
| 4214782 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.84 | 77.0 | 5.62e-01 | 100.0% | 42.1% |
| 4487048 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.84 | 77.0 | 5.39e-01 | 100.0% | 35.0% |
| 4526750 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.83 | 77.0 | 5.37e-01 | 100.0% | 57.8% |
| 4172781 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.83 | 76.0 | 5.39e-01 | 100.0% | 38.1% |
| 4477560 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.83 | 77.0 | 5.42e-01 | 100.0% | 36.7% |
| 4475959 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.83 | 76.0 | 5.42e-01 | 100.0% | 38.0% |
| 4938625 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.83 | 76.0 | 5.33e-01 | 100.0% | 36.4% |
| 4345620 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.83 | 76.0 | 5.22e-01 | 100.0% | 34.9% |
| 4335480 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.83 | 76.0 | 5.50e-01 | 100.0% | 39.0% |
| 4149866 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.82 | 73.0 | 5.22e-01 | 100.0% | 35.6% |
| 4131407 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.81 | 73.0 | 5.17e-01 | 100.0% | 34.4% |
| 4185283 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.81 | 74.0 | 5.17e-01 | 100.0% | 34.2% |
| 4217341 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.81 | 73.0 | 5.15e-01 | 100.0% | 41.1% |
| 3386108 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.80 | 73.0 | 5.20e-01 | 100.0% | 35.2% |
| 4068381 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.80 | 73.0 | 5.15e-01 | 100.0% | 36.8% |
| 5036673 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.79 | 72.0 | 5.09e-01 | 100.0% | 36.4% |
| 4288222 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.79 | 71.0 | 4.99e-01 | 100.0% | 36.1% |
| 5053743 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.79 | 72.0 | 5.08e-01 | 100.0% | 35.0% |
| 4636764 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.79 | 70.0 | 5.00e-01 | 100.0% | 34.9% |
| 3964051 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.78 | 71.0 | 5.05e-01 | 100.0% | 36.6% |
| 4611994 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.74 | 67.0 | 4.79e-01 | 100.0% | 36.9% |
| 5029717 | 328.9.1.1 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF | 0.68 | 55.0 | 5.46e-01 | 90.7% | 92.5% |
| 4989122 | 328.9.1.1 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF | 0.68 | 57.0 | 5.60e-01 | 93.3% | 93.8% |
| 3602394 | 2007.1.9.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › AIRC, PF30415 | 0.68 | 56.0 | 4.06e-01 | 92.0% | 35.8% |
| 5027998 | 328.9.1.1 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF | 0.68 | 56.0 | 5.36e-01 | 93.3% | 85.6% |
| 5080701 | 2003.1.5.445 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GvpD_bR2 | 0.67 | 56.0 | 4.14e-01 | 93.3% | 42.0% |
| 5042418 | 328.9.1.1 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF | 0.67 | 54.0 | 5.35e-01 | 90.7% | 93.8% |
| 5027367 | 328.9.1.1 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF | 0.67 | 56.0 | 5.50e-01 | 93.3% | 92.5% |
| 5014406 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.66 | 53.0 | 5.39e-01 | 92.0% | 98.7% |
| 3468553 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.65 | 52.0 | 4.21e-01 | 89.3% | 51.6% |
| 4521070 | 328.9.1.1 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF | 0.65 | 52.0 | 5.03e-01 | 89.3% | 82.4% |
| 3603067 | 328.9.1.0 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain | 0.65 | 52.0 | 5.20e-01 | 90.7% | 88.6% |
| 5027485 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.65 | 48.0 | 5.15e-01 | 86.7% | 100.0% |
| 4965344 | 328.9.1.4 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › DUF5779 | 0.64 | 51.0 | 5.15e-01 | 93.3% | 89.3% |
| 5010188 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.64 | 51.0 | 5.27e-01 | 89.3% | 100.0% |
| 3329753 | 2003.1.5.115 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29 | 0.62 | 51.0 | 3.96e-01 | 92.0% | 42.3% |
| 3658629 | 101.1.2.630 ↗ | alpha arrays › HTH › HTH › winged helix domain › Methyltransf_29 | 0.62 | 53.0 | 4.44e-01 | 97.3% | 57.8% |
| 3463189 | 2003.1.5.115 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29 | 0.62 | 53.0 | 3.73e-01 | 98.7% | 29.9% |
| 3271024 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.62 | 49.0 | 3.74e-01 | 89.3% | 38.4% |
| 4645295 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.62 | 52.0 | 4.54e-01 | 97.3% | 63.3% |
| 3260870 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.61 | 46.0 | 4.38e-01 | 81.3% | 72.2% |
| 4447744 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.61 | 45.0 | 3.62e-01 | 89.3% | 38.7% |
| 3992039 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.61 | 46.0 | 4.31e-01 | 82.7% | 86.2% |
| 4319701 | 2003.1.5.89 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Anamorsin_N | 0.61 | 50.0 | 4.40e-01 | 96.0% | 60.8% |
| 4986906 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.60 | 47.0 | 4.88e-01 | 89.3% | 98.6% |
| 3609147 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.60 | 44.0 | 4.00e-01 | 80.0% | 65.7% |
| 3716161 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.60 | 49.0 | 3.46e-01 | 94.7% | 29.4% |
| 1875302 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.59 | 49.0 | 3.80e-01 | 97.3% | 41.8% |
| 2582168 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.59 | 51.0 | 4.11e-01 | 100.0% | 97.5% |
| 3821093 | 328.4.1.1 ↗ | a+b two layers › IF3-like › YhbY-like › YhbY-like › CRS1_YhbY | 0.59 | 47.0 | 4.42e-01 | 89.3% | 77.9% |
| 3839283 | 2003.1.5.55 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA | 0.59 | 44.0 | 3.37e-01 | 84.0% | 33.5% |
| 4948041 | 328.9.1.0 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain | 0.57 | 46.0 | 4.54e-01 | 90.7% | 91.3% |
| 4170959 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.57 | 39.0 | 4.24e-01 | 73.3% | 91.7% |
| 3607649 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.56 | 40.0 | 4.26e-01 | 77.3% | 98.3% |
| 4312634 | 328.2.1.2 ↗ | a+b two layers › IF3-like › C-terminal domain of ProRS › C-terminal domain of ProRS › ProRS-C_2 | 0.55 | 44.0 | 4.46e-01 | 90.7% | 90.7% |
| 3966916 | 328.4.1.1 ↗ | a+b two layers › IF3-like › YhbY-like › YhbY-like › CRS1_YhbY | 0.55 | 42.0 | 4.04e-01 | 90.7% | 75.8% |
| 3853324 | 328.12.1.1 ↗ | a+b two layers › IF3-like › IF3-like domain in Nudix hydrolase › IF3-like domain in Nudix hydrolase › Nudix_hydro | 0.54 | 43.0 | 4.01e-01 | 90.7% | 82.0% |
| 3278524 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.54 | 45.0 | 3.40e-01 | 96.0% | 43.1% |
| 4995776 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 37.0 | 3.83e-01 | 76.0% | 88.6% |
| 4433372 | 192.11.1.2 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › CysS_C | 0.52 | 37.0 | 2.86e-01 | 97.3% | 31.4% |
| 3580171 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.51 | 38.0 | 3.62e-01 | 82.7% | 85.3% |
| 4375524 | 2006.1.1.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP | 0.51 | 38.0 | 2.74e-01 | 81.3% | 92.2% |
| 3797043 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.51 | 38.0 | 3.52e-01 | 80.0% | 81.8% |
| 3262891 | 101.1.2.79 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_I_A49 | 0.50 | 34.0 | 3.65e-01 | 72.0% | 90.8% |
| 5062574 | 328.12.1.0 ↗ | a+b two layers › IF3-like › IF3-like domain in Nudix hydrolase › IF3-like domain in Nudix hydrolase | 0.50 | 39.0 | 3.71e-01 | 89.3% | 89.5% |
| 4262041 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.50 | 38.0 | 2.75e-01 | 86.7% | 69.8% |
D3
medium
residues 291-399
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00275.26 best | EPSP_synthase | 101.0 | 8.70e-29 | 100.0% | 26.6% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ejdA01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.99 | 96.0 | 7.44e-01 | 100.0% | 52.7% |
| 4fqdA01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.93 | 89.0 | 6.82e-01 | 100.0% | 51.4% |
| 1rf6A01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.88 | 84.0 | 6.46e-01 | 100.0% | 53.9% |
| 1q36A01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.86 | 81.0 | 6.38e-01 | 100.0% | 54.1% |
| 2o0bA01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.86 | 81.0 | 6.35e-01 | 100.0% | 53.6% |
| 7m0oA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.86 | 81.0 | 6.62e-01 | 100.0% | 59.8% |
| 3slhA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.83 | 78.0 | 6.11e-01 | 100.0% | 54.8% |
| 4n3pA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.82 | 77.0 | 6.08e-01 | 100.0% | 55.2% |
| 2o0bA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.80 | 74.0 | 5.85e-01 | 100.0% | 54.4% |
| 1ejcA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.78 | 73.0 | 5.79e-01 | 100.0% | 54.3% |
| 2yvwA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.77 | 71.0 | 5.67e-01 | 100.0% | 53.9% |
| 4fqdB02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.74 | 68.0 | 5.38e-01 | 100.0% | 52.8% |
| 7vkkB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 40.0 | 3.18e-01 | 70.6% | 35.5% |
| 1ir6A02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.56 | 40.0 | 3.88e-01 | 97.2% | 63.6% |
| 3pcoB04 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.53 | 35.0 | 4.03e-01 | 75.2% | 97.3% |
| 5ghrA02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.52 | 39.0 | 3.73e-01 | 96.3% | 69.6% |
| 5xyiK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 33.0 | 3.62e-01 | 71.6% | 80.0% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4249253 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 1.00 | 98.0 | 7.50e-01 | 100.0% | 51.9% |
| 4149866 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 1.00 | 98.0 | 7.54e-01 | 100.0% | 53.2% |
| 4636764 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 1.00 | 98.0 | 7.49e-01 | 100.0% | 52.2% |
| 4096218 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 1.00 | 98.0 | 7.17e-01 | 100.0% | 45.8% |
| 3960518 | 328.6.1.0 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like | 0.99 | 97.0 | 7.58e-01 | 100.0% | 54.5% |
| 4588030 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.98 | 95.0 | 7.14e-01 | 100.0% | 56.0% |
| 4421136 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.97 | 94.0 | 7.26e-01 | 100.0% | 52.4% |
| 4591809 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.97 | 94.0 | 7.11e-01 | 100.0% | 53.6% |
| 5036674 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.91 | 88.0 | 6.83e-01 | 100.0% | 54.6% |
| 4141629 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.90 | 87.0 | 6.68e-01 | 100.0% | 53.0% |
| 4269299 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.90 | 87.0 | 6.77e-01 | 100.0% | 54.6% |
| 4947687 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.90 | 86.0 | 6.63e-01 | 100.0% | 52.6% |
| 4936448 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.90 | 86.0 | 6.64e-01 | 100.0% | 51.6% |
| 4335480 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.90 | 86.0 | 6.83e-01 | 100.0% | 56.4% |
| 4191375 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.90 | 86.0 | 6.60e-01 | 100.0% | 52.6% |
| 5036919 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.89 | 85.0 | 6.57e-01 | 100.0% | 52.1% |
| 4487048 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.89 | 85.0 | 6.51e-01 | 100.0% | 50.9% |
| 4666955 | 328.6.1.0 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like | 0.89 | 85.0 | 6.70e-01 | 100.0% | 56.0% |
| 4334914 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.88 | 83.0 | 6.56e-01 | 100.0% | 54.6% |
| 4053779 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.87 | 83.0 | 6.46e-01 | 100.0% | 53.6% |
| 4412449 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.87 | 82.0 | 6.33e-01 | 100.0% | 53.2% |
| 5066286 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.87 | 82.0 | 6.43e-01 | 100.0% | 53.8% |
| 4170177 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.87 | 82.0 | 6.53e-01 | 100.0% | 55.0% |
| 4096786 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.86 | 82.0 | 6.28e-01 | 100.0% | 51.4% |
| 4102751 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.86 | 81.0 | 6.26e-01 | 100.0% | 51.4% |
| 4364889 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.85 | 81.0 | 6.43e-01 | 100.0% | 55.0% |
| 4096255 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.85 | 80.0 | 6.21e-01 | 100.0% | 52.7% |
| 4475959 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.85 | 80.0 | 6.35e-01 | 100.0% | 54.6% |
| 3964051 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.84 | 79.0 | 6.17e-01 | 100.0% | 52.6% |
| 4484386 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.83 | 77.0 | 6.01e-01 | 100.0% | 54.1% |
| 5031649 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.82 | 77.0 | 6.00e-01 | 100.0% | 54.9% |
| 4947686 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.82 | 76.0 | 5.97e-01 | 100.0% | 54.9% |
| 3386108 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.81 | 76.0 | 5.99e-01 | 100.0% | 55.2% |
| 4494795 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.81 | 76.0 | 5.93e-01 | 100.0% | 53.5% |
| 4584041 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.81 | 75.0 | 5.91e-01 | 100.0% | 53.0% |
| 4309889 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.81 | 75.0 | 6.00e-01 | 100.0% | 55.1% |
| 4153650 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.81 | 75.0 | 6.03e-01 | 100.0% | 56.5% |
| 4202302 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.81 | 75.0 | 5.89e-01 | 100.0% | 52.6% |
| 4990558 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.80 | 72.0 | 5.86e-01 | 100.0% | 54.7% |
| 4172781 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.80 | 74.0 | 5.83e-01 | 100.0% | 55.3% |
| 4049326 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.80 | 74.0 | 5.63e-01 | 100.0% | 65.8% |
| 4090109 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.80 | 74.0 | 5.83e-01 | 100.0% | 53.5% |
| 4095323 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.80 | 74.0 | 5.90e-01 | 100.0% | 55.1% |
| 4143892 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.80 | 74.0 | 5.72e-01 | 100.0% | 52.0% |
| 5081543 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.79 | 73.0 | 5.78e-01 | 100.0% | 53.1% |
| 4515846 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.79 | 73.0 | 5.73e-01 | 100.0% | 53.5% |
| 4094762 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.79 | 73.0 | 5.78e-01 | 100.0% | 53.3% |
| 4990557 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.78 | 71.0 | 5.69e-01 | 100.0% | 53.8% |
| 3960517 | 328.6.1.0 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like | 0.77 | 72.0 | 5.66e-01 | 100.0% | 52.9% |
| 5066285 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.77 | 71.0 | 5.69e-01 | 100.0% | 55.1% |
| 5036673 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.76 | 70.0 | 5.51e-01 | 100.0% | 52.3% |
| 4134856 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.75 | 69.0 | 5.56e-01 | 100.0% | 54.6% |
| 3961181 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.74 | 69.0 | 5.36e-01 | 100.0% | 52.7% |
| 3579401 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 41.0 | 4.35e-01 | 87.2% | 80.0% |
| 3332978 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.58 | 40.0 | 3.10e-01 | 70.6% | 33.7% |
| 3478708 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.52 | 46.0 | 3.45e-01 | 100.0% | 88.9% |
| 4668511 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.52 | 35.0 | 3.89e-01 | 75.2% | 89.4% |
| 4347584 | 2003.1.5.68 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS_N | 0.51 | 40.0 | 3.68e-01 | 85.3% | 86.2% |