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CAKLQF020000038.1__CAH1096323.1__SAMEA5780031_03998__00011
Bact-VirCAKLQF020000038.1__CAH1096323.1__SAMEA5780031_03998__00011
Identity
- Kingdom:
- phage
Quality
70.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 118-269
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04963.20 best | Sigma54_CBD | 123.6 | 1.10e-35 | 100.0% | 72.4% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 27.0 | 3.48e-01 | 77.6% | 77.0% |
| 3nkhA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.52 | 39.0 | 3.46e-01 | 78.3% | 86.0% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4646295 | 101.1.20.1 ↗ | alpha arrays › HTH › HTH › Sigma54 core-binding domain › Sigma54_CBD | 0.99 | 98.0 | 9.46e-01 | 100.0% | 92.1% |
| 3947414 | 101.1.20.1 ↗ | alpha arrays › HTH › HTH › Sigma54 core-binding domain › Sigma54_CBD | 0.97 | 60.0 | 7.20e-01 | 100.0% | 87.3% |
| 4435996 | 101.1.1.279 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_CBD | 0.97 | 92.0 | 8.98e-01 | 100.0% | 91.9% |
| 3973130 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.96 | 91.0 | 8.91e-01 | 100.0% | 91.9% |
| 4391481 | 101.1.20.1 ↗ | alpha arrays › HTH › HTH › Sigma54 core-binding domain › Sigma54_CBD | 0.95 | 60.0 | 7.15e-01 | 99.3% | 88.2% |
| 4336157 | 101.1.20.1 ↗ | alpha arrays › HTH › HTH › Sigma54 core-binding domain › Sigma54_CBD | 0.95 | 84.0 | 8.49e-01 | 99.3% | 92.0% |
| 4290870 | 101.1.1.279 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_CBD | 0.94 | 83.0 | 8.19e-01 | 100.0% | 86.3% |
| 4087520 | 101.1.20.1 ↗ | alpha arrays › HTH › HTH › Sigma54 core-binding domain › Sigma54_CBD | 0.94 | 59.0 | 7.15e-01 | 72.4% | 91.4% |
| 3590898 | 101.1.20.1 ↗ | alpha arrays › HTH › HTH › Sigma54 core-binding domain › Sigma54_CBD | 0.93 | 82.0 | 8.31e-01 | 99.3% | 92.0% |
| 4600229 | 101.1.20.1 ↗ | alpha arrays › HTH › HTH › Sigma54 core-binding domain › Sigma54_CBD | 0.93 | 82.0 | 8.17e-01 | 100.0% | 89.0% |
| 4785542 | 101.1.20.1 ↗ | alpha arrays › HTH › HTH › Sigma54 core-binding domain › Sigma54_CBD | 0.90 | 79.0 | 7.38e-01 | 95.4% | 76.7% |
| 3838789 | 101.1.1.279 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_CBD | 0.89 | 75.0 | 7.68e-01 | 99.3% | 91.0% |
| 3387034 | 101.1.20.1 ↗ | alpha arrays › HTH › HTH › Sigma54 core-binding domain › Sigma54_CBD | 0.88 | 71.0 | 7.65e-01 | 98.0% | 96.9% |
| 4528688 | 101.1.1.279 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_CBD | 0.81 | 76.0 | 7.40e-01 | 98.0% | 97.6% |
| 3964077 | 101.1.20.1 ↗ | alpha arrays › HTH › HTH › Sigma54 core-binding domain › Sigma54_CBD | 0.80 | 73.0 | 6.75e-01 | 100.0% | 77.9% |
| 3549847 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.61 | 39.0 | 2.84e-01 | 97.4% | 25.9% |
| 3926827 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.58 | 42.0 | 2.80e-01 | 99.3% | 20.0% |
| 5054373 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.51 | 45.0 | 4.17e-01 | 94.1% | 84.1% |
D2
medium
residues 281-298_309-407
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04552.20 best | Sigma54_DBD | 116.5 | 1.40e-33 | 74.4% | 53.1% |
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 34.0 | 5.32e-01 | 81.2% | 100.0% |
| 3nrvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 38.0 | 3.67e-01 | 89.7% | 45.7% |
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 37.0 | 3.54e-01 | 89.7% | 44.2% |
| 1r1uB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 37.0 | 4.14e-01 | 88.9% | 66.7% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 37.0 | 3.63e-01 | 88.9% | 49.2% |
| 1zarA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 39.0 | 4.50e-01 | 88.0% | 76.4% |
| 1u2wD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 35.0 | 3.93e-01 | 82.1% | 63.8% |
| 2jt1A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 39.0 | 4.93e-01 | 87.2% | 95.8% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 36.0 | 4.05e-01 | 88.9% | 68.1% |
| 1lj9B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 37.0 | 3.49e-01 | 89.7% | 47.2% |
| 3bj6B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 37.0 | 3.41e-01 | 89.7% | 44.4% |
| 3g3zA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 34.0 | 4.60e-01 | 88.9% | 96.9% |
| 3pwxA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.64 | 46.0 | 3.96e-01 | 74.4% | 76.1% |
| 1dulA00 | 1.10.260.30 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain | 0.64 | 35.0 | 4.49e-01 | 95.7% | 92.6% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 41.0 | 4.91e-01 | 96.6% | 97.4% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 38.0 | 3.55e-01 | 90.6% | 49.3% |
| 2r3sB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 34.0 | 4.06e-01 | 85.5% | 76.5% |
| 2fbhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 37.0 | 3.52e-01 | 89.7% | 50.4% |
| 1zvuA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.62 | 43.0 | 4.10e-01 | 73.5% | 59.3% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.62 | 40.0 | 3.90e-01 | 77.8% | 60.3% |
| 5jbrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 38.0 | 4.42e-01 | 93.2% | 84.9% |
| 2k9lA00 | 1.10.10.1330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain | 0.62 | 34.0 | 4.13e-01 | 96.6% | 82.9% |
| 3cdhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 34.0 | 3.23e-01 | 91.5% | 46.3% |
| 4em2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 37.0 | 3.42e-01 | 85.5% | 48.7% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 39.0 | 4.29e-01 | 94.0% | 81.9% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 41.0 | 4.32e-01 | 94.9% | 78.6% |
| 3mczA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 31.0 | 3.59e-01 | 87.2% | 73.2% |
| 3gw2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 32.0 | 3.52e-01 | 88.9% | 67.7% |
| 7cluA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 31.0 | 3.53e-01 | 85.5% | 69.7% |
| 4rgxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 30.0 | 2.93e-01 | 91.5% | 44.0% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 38.0 | 3.82e-01 | 86.3% | 70.8% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.53 | 35.0 | 3.38e-01 | 98.3% | 59.5% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3973139 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.99 | 97.0 | 9.10e-01 | 100.0% | 94.1% |
| 4345169 | 101.1.1.33 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.97 | 95.0 | 8.66e-01 | 100.0% | 89.7% |
| 4437877 | 101.1.1.32 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_DBD | 0.95 | 92.0 | 8.39e-01 | 100.0% | 87.6% |
| 4680184 | 101.1.1.32 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_DBD | 0.95 | 92.0 | 8.53e-01 | 100.0% | 92.1% |
| 4224431 | 101.1.1.32 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_DBD | 0.94 | 91.0 | 8.71e-01 | 100.0% | 95.4% |
| None | — | 0.93 | 86.0 | 8.56e-01 | 100.0% | 91.7% | |
| 3587510 | 101.1.1.32 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_DBD | 0.92 | 89.0 | 8.03e-01 | 100.0% | 85.3% |
| 4864218 | 101.1.1.33 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 71.0 | 7.19e-01 | 100.0% | 81.6% |
| 4184676 | 101.1.1.32 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_DBD | 0.89 | 86.0 | 7.76e-01 | 100.0% | 82.7% |
| 3387027 | 101.1.1.33 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 84.0 | 8.06e-01 | 100.0% | 88.5% |
| 3838791 | 101.1.1.32 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_DBD | 0.85 | 80.0 | 7.86e-01 | 100.0% | 92.8% |
| 2389278 | 101.1.1.32 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_DBD | 0.82 | 78.0 | 7.10e-01 | 100.0% | 83.8% |
| 4785539 | 101.1.1.33 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 73.0 | 6.88e-01 | 94.9% | 86.9% |
| 4965902 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 37.0 | 3.98e-01 | 88.9% | 58.1% |
| 4957063 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 39.0 | 4.68e-01 | 92.3% | 82.5% |
| 5001507 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 39.0 | 4.08e-01 | 89.7% | 60.9% |
| 5045992 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 53.0 | 5.27e-01 | 84.6% | 89.6% |
| 5071074 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.67 | 36.0 | 3.89e-01 | 86.3% | 62.0% |
| 4976482 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 34.0 | 4.46e-01 | 96.6% | 92.3% |
| 4570960 | 605.1.1.137 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › RRP36 | 0.65 | 49.0 | 4.34e-01 | 77.8% | 59.4% |
| 4638765 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.63 | 37.0 | 3.48e-01 | 89.7% | 48.9% |
| 5073993 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 38.0 | 4.47e-01 | 100.0% | 87.5% |
| 4299749 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.62 | 44.0 | 4.14e-01 | 73.5% | 60.0% |
| 4031872 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.61 | 38.0 | 3.47e-01 | 85.5% | 50.3% |
| 3396391 | 101.1.2.303 ↗ | alpha arrays › HTH › HTH › winged helix domain › RPC5 | 0.60 | 35.0 | 3.86e-01 | 85.5% | 70.5% |
| 4992389 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 38.0 | 4.17e-01 | 98.3% | 77.9% |
| 3323279 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.60 | 41.0 | 4.04e-01 | 70.9% | 85.9% |
| 5042712 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.58 | 39.0 | 4.12e-01 | 90.6% | 76.2% |
| 3286931 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.56 | 33.0 | 3.07e-01 | 91.5% | 46.2% |
| 3282318 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.56 | 33.0 | 3.08e-01 | 91.5% | 46.9% |
| 3729479 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 37.0 | 3.26e-01 | 71.8% | 93.3% |
| 4946986 | 101.1.1.19 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SRP_SPB | 0.53 | 41.0 | 4.23e-01 | 94.9% | 84.3% |
D3
medium
residues 411-477
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04552.20 best | Sigma54_DBD | 88.3 | 6.50e-25 | 100.0% | 41.2% |
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.92 | 67.0 | 7.20e-01 | 100.0% | 86.4% |
| 3lapA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 67.0 | 6.72e-01 | 86.6% | 89.7% |
| 2fe3B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 65.0 | 5.94e-01 | 83.6% | 77.6% |
| 4mtdD01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 62.0 | 5.62e-01 | 83.6% | 71.6% |
| 2p5kA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 63.0 | 6.51e-01 | 85.1% | 96.8% |
| 3eyyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 59.0 | 5.53e-01 | 83.6% | 76.8% |
| 1sfuA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 62.0 | 6.15e-01 | 88.1% | 91.4% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 58.0 | 5.09e-01 | 83.6% | 70.8% |
| 2zj2A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 59.0 | 5.51e-01 | 88.1% | 84.5% |
| 1mzbA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 57.0 | 5.31e-01 | 83.6% | 80.5% |
| 1wy9A00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.72 | 49.0 | 4.08e-01 | 70.1% | 47.7% |
| 2qbyA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 55.0 | 5.00e-01 | 83.6% | 80.0% |
| 2od5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 55.0 | 5.01e-01 | 86.6% | 90.1% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 64.0 | 5.34e-01 | 100.0% | 62.5% |
| 1ussA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 54.0 | 4.97e-01 | 85.1% | 80.7% |
| 2qbyB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 51.0 | 4.65e-01 | 80.6% | 78.0% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 62.0 | 5.32e-01 | 100.0% | 70.9% |
| 2ns0A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 58.0 | 5.43e-01 | 97.0% | 94.0% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 60.0 | 5.78e-01 | 100.0% | 90.7% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.66 | 49.0 | 4.59e-01 | 82.1% | 98.9% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 47.0 | 3.79e-01 | 79.1% | 46.4% |
| 4usaA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.64 | 51.0 | 4.27e-01 | 100.0% | 50.4% |
| 1wgxA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 46.0 | 4.57e-01 | 92.5% | 74.0% |
| 4c0aA02 | 1.10.1000.11 | Mainly Alpha › Orthogonal Bundle › Arf Nucleotide-binding Site Opener; domain 2 › Arf Nucleotide-binding Site Opener,domain 2 | 0.62 | 52.0 | 4.41e-01 | 95.5% | 56.8% |
| 5gp9A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 40.0 | 4.42e-01 | 80.6% | 91.7% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 44.0 | 3.57e-01 | 77.6% | 42.7% |
| 1xszA02 | 1.10.1000.11 | Mainly Alpha › Orthogonal Bundle › Arf Nucleotide-binding Site Opener; domain 2 › Arf Nucleotide-binding Site Opener,domain 2 | 0.62 | 51.0 | 4.35e-01 | 94.0% | 58.3% |
| 4dbgB01 | 6.10.140.1100 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 35.0 | 3.99e-01 | 70.1% | 80.9% |
| 2cqnA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.60 | 47.0 | 4.51e-01 | 94.0% | 76.6% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 43.0 | 3.91e-01 | 98.5% | 56.7% |
| 2rfbA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.58 | 47.0 | 3.06e-01 | 92.5% | 64.8% |
| 3e3rB01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.58 | 51.0 | 4.74e-01 | 98.5% | 85.9% |
| 1rylA00 | 3.40.1760.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › YfbM-like super family | 0.58 | 40.0 | 3.17e-01 | 74.6% | 62.4% |
| 4n5xA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.57 | 38.0 | 3.69e-01 | 70.1% | 66.3% |
| 1re0B02 | 1.10.1000.11 | Mainly Alpha › Orthogonal Bundle › Arf Nucleotide-binding Site Opener; domain 2 › Arf Nucleotide-binding Site Opener,domain 2 | 0.57 | 46.0 | 3.94e-01 | 94.0% | 53.9% |
| 6b8hO01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.56 | 45.0 | 4.05e-01 | 91.0% | 75.8% |
| 5zorA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 41.0 | 4.04e-01 | 82.1% | 76.7% |
| 1hqvA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 46.0 | 3.42e-01 | 95.5% | 75.8% |
| 1yqyA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.54 | 41.0 | 3.00e-01 | 85.1% | 85.8% |
| 2oktA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 41.0 | 3.43e-01 | 98.5% | 45.3% |
| 3l9vC00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 38.0 | 2.90e-01 | 79.1% | 72.9% |
| 2ew2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.52 | 42.0 | 3.51e-01 | 95.5% | 56.7% |
| 1ac1A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 37.0 | 2.78e-01 | 76.1% | 31.4% |
| 6o1wA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 45.0 | 3.10e-01 | 100.0% | 40.4% |
| 3f0zA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.52 | 40.0 | 3.38e-01 | 95.5% | 47.9% |
| 1w5dA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 41.0 | 2.88e-01 | 91.0% | 45.5% |
| 2x64A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 44.0 | 3.76e-01 | 98.5% | 69.0% |
| 1fnnA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.51 | 35.0 | 3.08e-01 | 70.1% | 83.2% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3947448 | 101.1.2.62 ↗ | alpha arrays › HTH › HTH › winged helix domain › Sigma54_DBD | 1.00 | 97.0 | 9.54e-01 | 100.0% | 95.7% |
| 4129352 | 101.1.1.32 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_DBD | 0.97 | 83.0 | 8.44e-01 | 88.1% | 92.3% |
| 3028864 | 101.1.1.32 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_DBD | 0.97 | 93.0 | 9.15e-01 | 100.0% | 94.4% |
| 4649365 | 101.1.2.62 ↗ | alpha arrays › HTH › HTH › winged helix domain › Sigma54_DBD | 0.97 | 93.0 | 8.45e-01 | 100.0% | 81.0% |
| 4525366 | 101.1.1.32 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma54_DBD | 0.96 | 92.0 | 8.32e-01 | 100.0% | 81.2% |
| 3934874 | 101.1.1.396 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Arg_repressor | 0.95 | 70.0 | 7.70e-01 | 83.6% | 92.7% |
| 4103293 | 101.1.2.62 ↗ | alpha arrays › HTH › HTH › winged helix domain › Sigma54_DBD | 0.93 | 87.0 | 8.12e-01 | 98.5% | 100.0% |
| 3387028 | 101.1.2.62 ↗ | alpha arrays › HTH › HTH › winged helix domain › Sigma54_DBD | 0.92 | 87.0 | 8.55e-01 | 100.0% | 94.3% |
| 4946654 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.90 | 68.0 | 7.19e-01 | 97.0% | 88.3% |
| 3981939 | 101.1.1.202 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 | 0.89 | 68.0 | 7.42e-01 | 85.1% | 96.4% |
| 4957413 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.88 | 63.0 | 7.14e-01 | 80.6% | 100.0% |
| 3391047 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 66.0 | 7.00e-01 | 94.0% | 88.3% |
| 3590551 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.87 | 62.0 | 7.03e-01 | 77.6% | 100.0% |
| 4945040 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 69.0 | 7.30e-01 | 100.0% | 93.3% |
| 3983493 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.86 | 61.0 | 6.94e-01 | 77.6% | 100.0% |
| 4944585 | 101.1.2.872 ↗ | alpha arrays › HTH › HTH › winged helix domain › rve | 0.86 | 67.0 | 7.08e-01 | 98.5% | 91.7% |
| 3899987 | 101.1.1.12 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 | 0.86 | 68.0 | 6.20e-01 | 100.0% | 65.9% |
| 4008778 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 64.0 | 6.93e-01 | 85.1% | 96.4% |
| 4145524 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.85 | 70.0 | 7.16e-01 | 100.0% | 90.8% |
| 4106869 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.84 | 71.0 | 7.00e-01 | 89.6% | 90.0% |
| 4975263 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.83 | 68.0 | 6.20e-01 | 86.6% | 75.3% |
| 4625844 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.83 | 69.0 | 6.82e-01 | 88.1% | 87.1% |
| 3887965 | 101.1.1.12 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 | 0.83 | 63.0 | 6.83e-01 | 95.5% | 98.2% |
| 3878549 | 101.1.2.536 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc3_2 | 0.83 | 63.0 | 6.81e-01 | 95.5% | 98.2% |
| 4679974 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.83 | 67.0 | 6.47e-01 | 86.6% | 81.3% |
| 3291724 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.82 | 64.0 | 5.73e-01 | 82.1% | 76.7% |
| 4236554 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.82 | 63.0 | 6.65e-01 | 94.0% | 91.7% |
| 4096180 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.81 | 62.0 | 6.59e-01 | 80.6% | 93.3% |
| 4399502 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.81 | 66.0 | 6.68e-01 | 86.6% | 93.8% |
| 4596907 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 65.0 | 6.42e-01 | 100.0% | 82.9% |
| 3956565 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.80 | 65.0 | 5.95e-01 | 100.0% | 68.2% |
| 4464648 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.80 | 64.0 | 6.56e-01 | 100.0% | 87.7% |
| 5075560 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 62.0 | 4.67e-01 | 83.6% | 56.8% |
| 4653130 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.79 | 69.0 | 6.02e-01 | 92.5% | 68.4% |
| 3971509 | 101.1.2.851 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27731 | 0.79 | 62.0 | 5.57e-01 | 83.6% | 72.2% |
| 3984964 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.79 | 64.0 | 6.17e-01 | 100.0% | 77.3% |
| 3881313 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 66.0 | 6.70e-01 | 97.0% | 92.3% |
| 3293055 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.79 | 60.0 | 6.11e-01 | 92.5% | 83.1% |
| 3890613 | 101.1.2.698 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27079 | 0.78 | 65.0 | 6.58e-01 | 97.0% | 92.3% |
| 4127805 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.78 | 61.0 | 4.66e-01 | 83.6% | 76.7% |
| 5081193 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 58.0 | 5.96e-01 | 79.1% | 98.5% |
| 4974418 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 60.0 | 6.12e-01 | 83.6% | 96.9% |
| 3519342 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.76 | 59.0 | 6.41e-01 | 97.0% | 100.0% |
| 4955345 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.76 | 60.0 | 5.64e-01 | 85.1% | 73.8% |
| 4235730 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.76 | 60.0 | 6.25e-01 | 85.1% | 98.3% |
| 3982775 | 101.1.1.202 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 | 0.75 | 62.0 | 6.49e-01 | 100.0% | 100.0% |
| 160563 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.75 | 58.0 | 5.45e-01 | 83.6% | 82.7% |
| 5043893 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.75 | 59.0 | 5.84e-01 | 85.1% | 94.3% |
| 3550228 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 58.0 | 4.83e-01 | 85.1% | 61.7% |
| 4263795 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.74 | 58.0 | 5.57e-01 | 83.6% | 89.3% |
| 4135088 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.74 | 57.0 | 4.40e-01 | 83.6% | 44.7% |
| 3741461 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 57.0 | 6.01e-01 | 82.1% | 100.0% |
| 4933483 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 58.0 | 5.39e-01 | 86.6% | 80.0% |
| 3611890 | 1091.1.1.0 ↗ | alpha arrays › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 | 0.73 | 51.0 | 5.34e-01 | 82.1% | 83.3% |
| 4938633 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 63.0 | 4.92e-01 | 94.0% | 66.7% |
| 4629323 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.72 | 53.0 | 5.30e-01 | 79.1% | 92.9% |
| 4025625 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 63.0 | 6.26e-01 | 100.0% | 92.8% |
| 3724068 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 54.0 | 5.77e-01 | 92.5% | 100.0% |
| 3952640 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 52.0 | 5.65e-01 | 92.5% | 96.4% |
| 4111834 | 101.35.1.5 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 | 0.70 | 53.0 | 5.53e-01 | 85.1% | 90.0% |
| 3317316 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.70 | 64.0 | 4.99e-01 | 100.0% | 63.8% |
| 3712603 | 1091.1.1.1 ↗ | alpha arrays › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › Ribosomal_60s | 0.70 | 49.0 | 4.83e-01 | 79.1% | 70.0% |
| 3404571 | 101.1.2.206 ↗ | alpha arrays › HTH › HTH › winged helix domain › SAMD1_WH | 0.69 | 56.0 | 5.38e-01 | 92.5% | 95.0% |
| 3679418 | 108.1.1.104 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_8 | 0.69 | 47.0 | 4.69e-01 | 70.1% | 77.1% |
| 3953728 | 101.1.1.202 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 | 0.69 | 59.0 | 5.99e-01 | 98.5% | 98.5% |
| 3450169 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.69 | 52.0 | 5.48e-01 | 92.5% | 91.7% |
| 3769569 | 1091.1.1.0 ↗ | alpha arrays › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 › 60S acidic ribosomal protein P1/P2 | 0.68 | 50.0 | 5.07e-01 | 95.5% | 81.5% |
| 3400463 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 50.0 | 4.48e-01 | 79.1% | 70.5% |
| 4281784 | 108.1.1.104 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_8 | 0.67 | 46.0 | 4.23e-01 | 70.1% | 63.5% |
| 3814573 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 53.0 | 4.70e-01 | 91.0% | 64.8% |
| 5003128 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 57.0 | 5.09e-01 | 100.0% | 79.0% |
| 3237291 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 52.0 | 4.73e-01 | 86.6% | 78.9% |
| 3357976 | 108.1.1.99 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 | 0.65 | 44.0 | 4.20e-01 | 70.1% | 66.3% |
| 4634397 | 101.1.1.51 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Slx4 | 0.65 | 57.0 | 5.58e-01 | 98.5% | 98.6% |
| 3930174 | 168.1.1.1 ↗ | alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain › Sec7 | 0.63 | 50.0 | 3.94e-01 | 95.5% | 39.4% |
| 3737539 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.63 | 54.0 | 5.18e-01 | 100.0% | 88.7% |
| 3971293 | 101.1.2.845 ↗ | alpha arrays › HTH › HTH › winged helix domain › SelB-wing_3, SelB_WH_2nd_bact | 0.62 | 54.0 | 4.41e-01 | 100.0% | 82.3% |
| 3220167 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.61 | 42.0 | 4.15e-01 | 70.1% | 67.1% |
| 4505151 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.61 | 45.0 | 4.35e-01 | 77.6% | 76.0% |
| 3482967 | 168.1.1.1 ↗ | alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain › Sec7 | 0.61 | 48.0 | 3.54e-01 | 94.0% | 30.8% |
| 3247708 | 108.1.1.97 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 | 0.61 | 49.0 | 4.12e-01 | 88.1% | 78.3% |
| 3502282 | 168.1.1.1 ↗ | alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain › Sec7 | 0.61 | 49.0 | 3.64e-01 | 95.5% | 32.8% |
| 428838 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.60 | 41.0 | 3.34e-01 | 71.6% | 38.2% |
| 3939822 | 108.1.1.96 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 | 0.58 | 50.0 | 3.98e-01 | 100.0% | 90.3% |
| 3936732 | 108.1.1.96 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 | 0.56 | 49.0 | 3.43e-01 | 100.0% | 95.6% |
| 4965343 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.55 | 48.0 | 3.00e-01 | 100.0% | 23.3% |
| 4356696 | 101.1.17.1 ↗ | alpha arrays › HTH › HTH › FF domain › Ribosomal_S17e | 0.55 | 42.0 | 4.19e-01 | 85.1% | 82.9% |
| 4972259 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 35.0 | 3.48e-01 | 70.1% | 58.7% |
| 4184949 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.52 | 43.0 | 3.46e-01 | 100.0% | 78.1% |