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CAKLQF020000042.1__CAH1096647.1__SAMEA5780031_04028__00001
Bact-VirCAKLQF020000042.1__CAH1096647.1__SAMEA5780031_04028__00001
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 45-125_206-237
Domain cluster:
rep: OR810919.1__WQZ00519.1__AEV23_00075__00075__D1-73_145-162
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01609.28 best | DDE_Tnp_1 | 55.0 | 1.30e-14 | 74.3% | 35.0% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bcoA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.73 | 64.0 | 5.00e-01 | 92.9% | 88.3% |
| 7pikC01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.68 | 57.0 | 4.61e-01 | 88.5% | 91.3% |
| 1yqzA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.67 | 43.0 | 4.48e-01 | 98.2% | 68.5% |
| 3cgbA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.63 | 42.0 | 4.30e-01 | 99.1% | 70.0% |
| 4fx9A03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.62 | 42.0 | 4.25e-01 | 100.0% | 69.9% |
| 2cduA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.59 | 41.0 | 4.13e-01 | 100.0% | 70.8% |
| 7kx7A03 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.58 | 41.0 | 3.31e-01 | 73.5% | 100.0% |
| 2y6uA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 45.0 | 3.23e-01 | 90.3% | 99.7% |
| 4o8uA00 | 3.30.420.440 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF4152 | 0.53 | 42.0 | 3.39e-01 | 85.8% | 87.7% |
| 4mt5A02 | 2.60.40.4300 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 37.0 | 3.81e-01 | 75.2% | 88.4% |
| 1ojtA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.52 | 39.0 | 3.86e-01 | 100.0% | 74.6% |
| 4uv3E01 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.51 | 46.0 | 3.78e-01 | 100.0% | 85.2% |
| 1dgjA07 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.50 | 43.0 | 3.53e-01 | 92.0% | 83.4% |
| 1fhvA02 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.50 | 41.0 | 4.01e-01 | 88.5% | 94.4% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3949341 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 89.0 | 6.38e-01 | 100.0% | 70.9% |
| 5040335 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.89 | 83.0 | 6.56e-01 | 97.3% | 94.6% |
| 4940124 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.88 | 84.0 | 5.90e-01 | 100.0% | 65.7% |
| 4977119 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.85 | 82.0 | 6.30e-01 | 100.0% | 90.7% |
| 4945072 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.85 | 81.0 | 5.86e-01 | 100.0% | 73.2% |
| 5027997 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.85 | 81.0 | 6.00e-01 | 100.0% | 76.8% |
| 5005291 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.84 | 81.0 | 6.26e-01 | 100.0% | 88.6% |
| 3949232 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 80.0 | 5.34e-01 | 100.0% | 74.1% |
| 4451157 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.83 | 78.0 | 6.03e-01 | 100.0% | 87.4% |
| 4962044 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.81 | 77.0 | 5.63e-01 | 100.0% | 67.0% |
| 4008870 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.80 | 76.0 | 5.08e-01 | 100.0% | 65.1% |
| 4992937 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.80 | 76.0 | 5.20e-01 | 100.0% | 74.8% |
| 4944889 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.80 | 68.0 | 5.62e-01 | 88.5% | 100.0% |
| 4009433 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 72.0 | 4.89e-01 | 100.0% | 71.1% |
| 3986085 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.76 | 49.0 | 5.32e-01 | 70.8% | 76.8% |
| 5031452 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.76 | 52.0 | 5.64e-01 | 71.7% | 83.2% |
| 5008722 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.75 | 71.0 | 5.03e-01 | 100.0% | 62.3% |
| 4961488 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.75 | 71.0 | 4.73e-01 | 100.0% | 67.3% |
| 3907501 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.74 | 67.0 | 4.86e-01 | 100.0% | 62.5% |
| 5079440 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.73 | 68.0 | 5.57e-01 | 100.0% | 74.4% |
| 4259031 | 2484.1.1.219 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF29688 | 0.73 | 64.0 | 5.34e-01 | 92.9% | 96.2% |
| 3588285 | 2484.1.1.202 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_2 | 0.73 | 64.0 | 5.17e-01 | 92.9% | 82.5% |
| 5053278 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.73 | 67.0 | 4.58e-01 | 100.0% | 73.5% |
| 3952641 | 2484.1.1.194 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3 | 0.71 | 62.0 | 5.11e-01 | 92.9% | 78.5% |
| 4927589 | 2484.1.1.101 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 | 0.71 | 63.0 | 5.19e-01 | 93.8% | 93.2% |
| 4929499 | 2484.1.1.101 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 | 0.69 | 64.0 | 5.65e-01 | 100.0% | 91.3% |
| 3270453 | 2484.1.1.120 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_4 | 0.66 | 48.0 | 4.46e-01 | 75.2% | 100.0% |
| 3742593 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.62 | 38.0 | 4.14e-01 | 82.3% | 74.4% |
| 5043294 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.57 | 40.0 | 3.81e-01 | 71.7% | 86.9% |
| 3817782 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.57 | 39.0 | 3.66e-01 | 89.4% | 56.4% |
| 5030209 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.56 | 47.0 | 4.46e-01 | 92.9% | 99.3% |
| 3170080 | 2484.2.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain | 0.54 | 43.0 | 4.63e-01 | 89.4% | 98.9% |
| 4998749 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.52 | 36.0 | 3.74e-01 | 87.6% | 76.2% |
| 3958972 | 512.1.1.0 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | 0.52 | 34.0 | 3.70e-01 | 92.9% | 80.0% |
| 3371527 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 39.0 | 3.77e-01 | 99.1% | 71.8% |
| 3643291 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.50 | 34.0 | 3.51e-01 | 86.7% | 70.9% |
| 4978349 | 512.1.1.0 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | 0.50 | 37.0 | 3.55e-01 | 100.0% | 66.2% |
| 3238442 | 3091.1.1.1 ↗ | a+b complex topology › Myosin VI cargo binding domain › Myosin VI cargo binding domain › Myosin VI cargo binding domain › Myosin-VI_CBD | 0.50 | 34.0 | 3.60e-01 | 90.3% | 78.0% |
| 3179489 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.50 | 43.0 | 4.00e-01 | 93.8% | 75.0% |
D2
medium
residues 126-205
Domain cluster:
rep: OR810919.1__WQZ00519.1__AEV23_00075__00075__D74-144
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01609.28 best | DDE_Tnp_1 | 37.2 | 3.90e-09 | 100.0% | 47.5% |