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CAKLQF020000043.1__CAH1096686.1__SAMEA5780031_04040__00007
Bact-VirCAKLQF020000043.1__CAH1096686.1__SAMEA5780031_04040__00007
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-94
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01051.28 best | Rep3_N | 40.1 | 6.80e-10 | 100.0% | 48.9% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ug8A00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.60 | 36.0 | 3.58e-01 | 88.7% | 55.2% |
| 1kyzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 41.0 | 3.79e-01 | 95.0% | 59.2% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.56 | 31.0 | 3.25e-01 | 80.0% | 59.2% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.56 | 36.0 | 3.59e-01 | 95.0% | 63.4% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 44.0 | 3.81e-01 | 100.0% | 55.0% |
| 2k4qA00 | 4.10.410.40 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › | 0.53 | 41.0 | 3.32e-01 | 90.0% | 42.9% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.53 | 42.0 | 3.84e-01 | 100.0% | 62.7% |
| 3o4fH02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 34.0 | 2.49e-01 | 86.3% | 24.3% |
| 3g2mB01 | 6.20.160.20 | Special › Other non-globular › HSP40/DNAj peptide-binding domain › | 0.52 | 31.0 | 3.78e-01 | 76.2% | 98.0% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 36.0 | 3.53e-01 | 100.0% | 65.2% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 35.0 | 3.26e-01 | 70.0% | 73.5% |
| 1dw9A02 | 3.30.1160.10 | Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain | 0.51 | 29.0 | 3.08e-01 | 75.0% | 61.8% |
| 1amuA04 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.51 | 33.0 | 3.19e-01 | 80.0% | 55.2% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2482289 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.87 | 83.0 | 6.85e-01 | 100.0% | 63.6% |
| 3986771 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.79 | 72.0 | 6.07e-01 | 100.0% | 64.6% |
| 5082315 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.78 | 72.0 | 6.03e-01 | 100.0% | 66.9% |
| 3946400 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.72 | 65.0 | 5.02e-01 | 100.0% | 53.1% |
| 4437876 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 61.0 | 4.87e-01 | 100.0% | 52.5% |
| 4192947 | 101.1.2.16 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_N | 0.68 | 60.0 | 4.79e-01 | 100.0% | 50.9% |
| 4030290 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.60 | 47.0 | 3.02e-01 | 83.7% | 34.7% |
| 3238753 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.60 | 43.0 | 3.42e-01 | 77.5% | 88.6% |
| 3817420 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 42.0 | 3.33e-01 | 76.2% | 88.0% |
| 4992185 | 3696.1.1.0 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related | 0.58 | 40.0 | 3.75e-01 | 71.2% | 64.0% |
| 3398317 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.58 | 42.0 | 3.38e-01 | 76.2% | 94.4% |
| 3491256 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.58 | 42.0 | 3.34e-01 | 77.5% | 87.4% |
| 4029228 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.57 | 41.0 | 3.17e-01 | 76.2% | 81.6% |
| 3802667 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.57 | 40.0 | 3.68e-01 | 95.0% | 56.2% |
| 4023956 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.56 | 43.0 | 3.79e-01 | 86.3% | 94.6% |
| 3409778 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.56 | 41.0 | 3.54e-01 | 78.8% | 94.6% |
| 3709607 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 40.0 | 3.17e-01 | 77.5% | 88.0% |
| 3515407 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 39.0 | 3.21e-01 | 77.5% | 92.9% |
| 3620592 | 6155.1.1.15 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › DUF846 | 0.54 | 42.0 | 3.59e-01 | 86.3% | 85.7% |
| 3703231 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.53 | 44.0 | 3.53e-01 | 92.5% | 97.0% |
| 3608162 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.53 | 43.0 | 3.51e-01 | 92.5% | 94.5% |
| 3924998 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.53 | 42.0 | 2.81e-01 | 88.7% | 80.8% |
| 5082808 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.53 | 42.0 | 2.40e-01 | 87.5% | 46.2% |
| 3519143 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.52 | 43.0 | 2.94e-01 | 91.3% | 43.0% |
| 3717029 | 109.4.1.116 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIH_assoc | 0.52 | 44.0 | 2.70e-01 | 92.5% | 21.0% |
| None | — | 0.51 | 43.0 | 2.88e-01 | 90.0% | 56.9% | |
| 4927944 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 39.0 | 3.64e-01 | 82.5% | 100.0% |
| 4002132 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.50 | 38.0 | 2.59e-01 | 82.5% | 93.5% |
D2
high
residues 102-194
Domain cluster:
rep: aot2015-NO19_SRR1761693_USA_trim_clean_trim_clean_scaffold_5_curated_closed_complete_reversed_prodigal-single.1__X__X__00003__D161-243
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21205.4 best | Rep3_C | 65.8 | 4.60e-18 | 64.5% | 94.9% |
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1repC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.91 | 83.0 | 8.44e-01 | 94.6% | 97.8% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.66 | 50.0 | 5.16e-01 | 92.5% | 84.4% |
| 2obpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 49.0 | 5.13e-01 | 93.5% | 92.6% |
| 1ug8A00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.64 | 46.0 | 4.72e-01 | 92.5% | 79.3% |
| 4atnA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 48.0 | 3.88e-01 | 90.3% | 40.7% |
| 2jzxA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.64 | 37.0 | 4.03e-01 | 75.3% | 67.1% |
| 2h00B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 41.0 | 3.20e-01 | 89.2% | 31.0% |
| 1hw7A01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.60 | 44.0 | 3.63e-01 | 77.4% | 96.5% |
| 3m05B01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 33.0 | 3.39e-01 | 76.3% | 53.3% |
| 2p4wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 44.0 | 4.32e-01 | 96.8% | 71.8% |
| 2gx5C00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.60 | 43.0 | 3.54e-01 | 74.2% | 59.0% |
| 3dbaA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.59 | 42.0 | 3.51e-01 | 75.3% | 88.9% |
| 2bkyX00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.59 | 44.0 | 4.52e-01 | 91.4% | 84.9% |
| 2f7vA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 42.0 | 4.05e-01 | 75.3% | 71.3% |
| 3bjnA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.57 | 41.0 | 3.41e-01 | 75.3% | 72.2% |
| 2ch0A01 | 1.10.10.1180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAN1, winged-helix domain | 0.56 | 46.0 | 4.55e-01 | 90.3% | 89.8% |
| 3b8pA00 | 3.30.1890.10 | Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like | 0.56 | 40.0 | 3.13e-01 | 75.3% | 41.5% |
| 2ykfA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 40.0 | 3.43e-01 | 75.3% | 71.2% |
| 3cwfA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 38.0 | 3.60e-01 | 75.3% | 60.2% |
| 3e0yA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.55 | 40.0 | 3.41e-01 | 77.4% | 58.7% |
| 3rkxA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 42.0 | 3.26e-01 | 81.7% | 59.0% |
| 3duwA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 42.0 | 3.27e-01 | 91.4% | 36.1% |
| 5w2fA01 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.54 | 35.0 | 3.61e-01 | 86.0% | 69.8% |
| 3licA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 39.0 | 3.24e-01 | 77.4% | 84.3% |
| 3fo3A02 | 1.10.1130.10 | Mainly Alpha › Orthogonal Bundle › Flavocytochrome C3; Chain A, domain 2 › Flavocytochrome C3; Chain A | 0.54 | 35.0 | 2.35e-01 | 78.5% | 17.2% |
| 4i0kA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 35.0 | 3.47e-01 | 81.7% | 64.2% |
| 2c42A03 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.53 | 38.0 | 3.02e-01 | 76.3% | 61.3% |
| 3h0lA00 | 3.90.1300.10 | Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain | 0.53 | 45.0 | 2.95e-01 | 98.9% | 39.1% |
| 7dluA03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 33.0 | 3.50e-01 | 75.3% | 73.4% |
| 5xgbA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 38.0 | 3.50e-01 | 75.3% | 85.6% |
| 7prrB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 39.0 | 3.25e-01 | 80.6% | 98.2% |
| 7kgcA01 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.52 | 45.0 | 4.22e-01 | 100.0% | 100.0% |
| 3li9A02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 39.0 | 3.49e-01 | 81.7% | 100.0% |
| 3bzbB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 44.0 | 3.51e-01 | 100.0% | 51.0% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.51 | 40.0 | 3.84e-01 | 97.8% | 74.1% |
| 2vzyC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 43.0 | 3.54e-01 | 100.0% | 98.4% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4620040 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.96 | 91.0 | 8.65e-01 | 100.0% | 86.7% |
| 4563576 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.93 | 86.0 | 8.61e-01 | 100.0% | 94.7% |
| 5082316 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.92 | 87.0 | 8.67e-01 | 98.9% | 96.8% |
| 3036035 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.92 | 88.0 | 8.37e-01 | 100.0% | 89.5% |
| 5083610 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.91 | 86.0 | 8.24e-01 | 100.0% | 90.5% |
| 1175570 | 101.1.2.17 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.89 | 85.0 | 7.52e-01 | 100.0% | 74.6% |
| 3946059 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.89 | 78.0 | 8.01e-01 | 97.8% | 95.6% |
| 3985754 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.89 | 85.0 | 8.24e-01 | 100.0% | 95.0% |
| 3588338 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.88 | 84.0 | 6.65e-01 | 100.0% | 55.9% |
| 3168706 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.66 | 57.0 | 5.31e-01 | 94.6% | 94.8% |
| 4045503 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.64 | 34.0 | 3.70e-01 | 76.3% | 61.3% |
| 3857154 | 101.1.2.151 ↗ | alpha arrays › HTH › HTH › winged helix domain › COR | 0.62 | 50.0 | 4.62e-01 | 91.4% | 67.5% |
| 3174361 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.62 | 50.0 | 3.74e-01 | 92.5% | 34.5% |
| 3413597 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.60 | 51.0 | 3.50e-01 | 93.5% | 60.0% |
| 3939568 | 2003.1.5.54 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_10 | 0.60 | 43.0 | 3.05e-01 | 90.3% | 24.6% |
| 4943826 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.60 | 38.0 | 3.09e-01 | 76.3% | 33.0% |
| 4947850 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 49.0 | 4.74e-01 | 92.5% | 82.9% |
| 3575591 | 101.1.2.37 ↗ | alpha arrays › HTH › HTH › winged helix domain › E2F_TDP | 0.59 | 47.0 | 4.68e-01 | 90.3% | 85.0% |
| 3579786 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 49.0 | 4.85e-01 | 94.6% | 89.8% |
| 3677432 | 2003.1.5.70 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_15 | 0.58 | 42.0 | 2.99e-01 | 90.3% | 25.0% |
| 3973712 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.58 | 49.0 | 3.91e-01 | 93.5% | 57.4% |
| 3386399 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.58 | 42.0 | 3.75e-01 | 75.3% | 80.0% |
| 3586334 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.57 | 38.0 | 3.89e-01 | 74.2% | 70.0% |
| 3501316 | 101.1.2.271 ↗ | alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC | 0.57 | 49.0 | 4.74e-01 | 100.0% | 88.2% |
| 3702328 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 48.0 | 3.14e-01 | 94.6% | 23.9% |
| 3602910 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.56 | 42.0 | 4.31e-01 | 98.9% | 84.4% |
| 3735293 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.56 | 48.0 | 3.50e-01 | 95.7% | 35.4% |
| 4989305 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.56 | 46.0 | 4.34e-01 | 92.5% | 94.7% |
| 198782 | 223.1.1.33 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_like | 0.55 | 38.0 | 3.60e-01 | 75.3% | 60.2% |
| 4023653 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.55 | 34.0 | 3.60e-01 | 74.2% | 70.0% |
| 3734507 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.55 | 46.0 | 3.03e-01 | 91.4% | 22.6% |
| 3204657 | 218.3.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Prokaryotic ribosomal protein L17 › Prokaryotic ribosomal protein L17 › Ribosomal_L17 | 0.55 | 33.0 | 2.80e-01 | 93.5% | 32.9% |
| 3582958 | 864.1.1.2 ↗ | a+b two layers › DLC › DLC › DLC › Tctex-1 | 0.55 | 38.0 | 3.57e-01 | 74.2% | 82.5% |
| 3208219 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 38.0 | 3.53e-01 | 73.1% | 60.8% |
| 4487383 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.54 | 47.0 | 4.47e-01 | 100.0% | 83.6% |
| 3926827 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.54 | 48.0 | 2.98e-01 | 100.0% | 19.6% |
| 4961641 | 223.1.1.24 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 | 0.54 | 39.0 | 3.70e-01 | 75.3% | 78.2% |
| 4282776 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.54 | 41.0 | 3.76e-01 | 81.7% | 88.0% |
| 3585425 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.54 | 45.0 | 4.48e-01 | 93.5% | 97.9% |
| 5073740 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.54 | 45.0 | 3.54e-01 | 94.6% | 80.5% |
| 5074064 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.53 | 43.0 | 3.42e-01 | 92.5% | 96.3% |
| 4139733 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.53 | 35.0 | 3.43e-01 | 74.2% | 62.0% |
| 3811780 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.53 | 47.0 | 4.38e-01 | 98.9% | 85.2% |
| 5028718 | 223.8.1.0 ↗ | a+b three layers › Profilin-like › LapD periplasmic domain › LapD periplasmic domain | 0.53 | 38.0 | 3.71e-01 | 76.3% | 100.0% |
| 4979847 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.53 | 42.0 | 3.41e-01 | 100.0% | 42.6% |
| 3501318 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.53 | 46.0 | 3.08e-01 | 98.9% | 24.1% |
| 4975452 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.53 | 42.0 | 3.96e-01 | 88.2% | 85.2% |
| 3512870 | 873.1.1.4 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › TRAPP | 0.52 | 44.0 | 3.67e-01 | 92.5% | 67.9% |
| 5072112 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.52 | 45.0 | 3.89e-01 | 100.0% | 60.6% |
| 4950080 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.52 | 45.0 | 3.87e-01 | 98.9% | 70.6% |
| 4009015 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.51 | 37.0 | 3.56e-01 | 75.3% | 82.7% |
| 5065186 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.51 | 44.0 | 3.90e-01 | 96.8% | 69.8% |
| 4971398 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.51 | 44.0 | 4.26e-01 | 100.0% | 86.4% |
| 5071258 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.51 | 45.0 | 3.47e-01 | 98.9% | 49.8% |
| 5006515 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.51 | 37.0 | 3.44e-01 | 75.3% | 88.7% |
| 5044672 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.51 | 44.0 | 3.78e-01 | 98.9% | 68.4% |
| 1146732 | 223.1.1.35 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_2 | 0.51 | 36.0 | 3.33e-01 | 76.3% | 93.0% |
| 3674754 | 873.1.1.4 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › TRAPP | 0.51 | 42.0 | 3.51e-01 | 93.5% | 75.4% |
| 3269660 | 873.1.1.4 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › TRAPP | 0.50 | 43.0 | 3.70e-01 | 98.9% | 65.0% |
D3
high
residues 208-272
Domain cluster:
rep: CAKLQF020000006.1__CAH1080011.1__SAMEA5780031_01462__00104__D255-309