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CAKLQF020000044.1__CAH1096713.1__SAMEA5780031_04046__00005
Bact-VirCAKLQF020000044.1__CAH1096713.1__SAMEA5780031_04046__00005
Identity
- Kingdom:
- phage
Quality
93.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-182
Domain cluster:
rep: OQ988004.1__WKV22171.1__8UZL_00053__00053__D13-201
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00764.26 best | Arginosuc_synth | 75.4 | 7.80e-21 | 90.3% | 90.1% |
| PF06508.20 | QueC | 22.1 | 1.30e-04 | 47.2% | 32.4% |
CATH (79)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k92A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.98 | 81.0 | 8.57e-01 | 100.0% | 92.5% |
| 4xfjB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.91 | 82.0 | 8.29e-01 | 96.0% | 93.6% |
| 4nzpA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.89 | 67.0 | 7.62e-01 | 97.2% | 98.6% |
| 2c5sA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.80 | 68.0 | 6.47e-01 | 97.2% | 77.3% |
| 2dplA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.79 | 62.0 | 6.45e-01 | 98.3% | 87.2% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.76 | 65.0 | 5.64e-01 | 98.3% | 61.3% |
| 1vbkA03 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.73 | 53.0 | 6.02e-01 | 96.6% | 98.5% |
| 3gmsA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.73 | 43.0 | 5.06e-01 | 86.4% | 81.7% |
| 2pg3A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.72 | 65.0 | 6.01e-01 | 95.5% | 77.7% |
| 1kqpA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.71 | 65.0 | 5.56e-01 | 98.9% | 63.5% |
| 3ojcA01 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 44.0 | 5.36e-01 | 86.4% | 94.0% |
| 3vrhA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.69 | 65.0 | 5.35e-01 | 99.4% | 59.1% |
| 3k32B00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 61.0 | 5.89e-01 | 96.0% | 99.5% |
| 1q15D02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 63.0 | 5.40e-01 | 98.9% | 76.1% |
| 1ep3B02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.66 | 44.0 | 5.21e-01 | 86.4% | 99.1% |
| 4d8tA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 39.0 | 4.81e-01 | 71.6% | 93.6% |
| 1ufvA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.64 | 55.0 | 5.58e-01 | 90.3% | 91.3% |
| 5y8lB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 46.0 | 4.81e-01 | 93.8% | 80.0% |
| 4g1vA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.62 | 44.0 | 4.87e-01 | 86.4% | 92.6% |
| 2b0cA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.61 | 45.0 | 5.07e-01 | 88.1% | 99.2% |
| 2eihA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 44.0 | 4.78e-01 | 89.8% | 91.6% |
| 4v19S00 | 3.30.420.80 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 | 0.59 | 39.0 | 4.28e-01 | 82.4% | 80.4% |
| 1krhA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.59 | 43.0 | 4.79e-01 | 87.5% | 97.8% |
| 2f9fA00 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.59 | 42.0 | 4.36e-01 | 88.1% | 77.7% |
| 5k1sB00 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.59 | 49.0 | 3.91e-01 | 99.4% | 45.9% |
| 4rgbA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 52.0 | 4.48e-01 | 96.0% | 89.1% |
| 4ywoA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 35.0 | 4.24e-01 | 72.2% | 89.7% |
| 3s55E00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 52.0 | 4.52e-01 | 96.0% | 88.3% |
| 3e03A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 52.0 | 4.50e-01 | 96.6% | 93.6% |
| 3ucxA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 51.0 | 4.49e-01 | 94.9% | 88.0% |
| 3pxxD00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 52.0 | 4.45e-01 | 96.0% | 89.0% |
| 1g0nB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 51.0 | 4.53e-01 | 95.5% | 84.6% |
| 3e9qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 51.0 | 4.50e-01 | 95.5% | 86.7% |
| 3tscA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 51.0 | 4.43e-01 | 96.0% | 89.3% |
| 3wdsA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 50.0 | 4.40e-01 | 94.3% | 88.3% |
| 1fdrA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.57 | 45.0 | 4.78e-01 | 86.9% | 96.1% |
| 4j2hA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 49.0 | 4.40e-01 | 94.3% | 87.3% |
| 3i3oG00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 51.0 | 4.54e-01 | 96.0% | 82.4% |
| 3o38B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 50.0 | 4.53e-01 | 94.9% | 84.7% |
| 3r1iB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 49.0 | 4.42e-01 | 94.3% | 85.8% |
| 3tzqB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 50.0 | 4.55e-01 | 96.6% | 89.2% |
| 2z5lA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 49.0 | 3.67e-01 | 95.5% | 45.9% |
| 3ksuB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 50.0 | 4.65e-01 | 96.6% | 89.2% |
| 4fn4A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 50.0 | 4.43e-01 | 96.6% | 88.2% |
| 3svtA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 49.0 | 4.22e-01 | 94.3% | 81.0% |
| 3rd5A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 49.0 | 4.27e-01 | 94.9% | 76.1% |
| 3u9lA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 49.0 | 4.20e-01 | 95.5% | 81.5% |
| 5thqA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 50.0 | 4.43e-01 | 96.0% | 88.7% |
| 3l6eA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 49.0 | 4.64e-01 | 94.3% | 87.6% |
| 2r9zA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 34.0 | 4.10e-01 | 72.2% | 90.7% |
| 3o0hB02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 34.0 | 4.07e-01 | 72.2% | 90.6% |
| 1qydA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 47.0 | 4.62e-01 | 90.3% | 83.8% |
| 1zemA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 48.0 | 4.21e-01 | 93.2% | 90.4% |
| 1iy8A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 48.0 | 4.23e-01 | 93.8% | 88.0% |
| 1xdiA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 34.0 | 4.12e-01 | 72.2% | 91.6% |
| 1h5qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 47.0 | 4.21e-01 | 93.8% | 87.7% |
| 6b4oA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 34.0 | 4.12e-01 | 72.2% | 92.4% |
| 6cmzA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 34.0 | 4.10e-01 | 72.2% | 92.4% |
| 5x1yA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 35.0 | 4.09e-01 | 72.2% | 91.0% |
| 2fwmX00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 46.0 | 4.39e-01 | 91.5% | 96.2% |
| 6aonA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 35.0 | 4.12e-01 | 72.2% | 91.9% |
| 4impA03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 48.0 | 4.26e-01 | 96.0% | 80.5% |
| 4m52A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 35.0 | 4.11e-01 | 75.6% | 92.6% |
| 3k30A03 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 35.0 | 3.98e-01 | 75.6% | 85.0% |
| 3m1lA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 47.0 | 4.46e-01 | 94.3% | 85.0% |
| 1ebdA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 34.0 | 4.05e-01 | 72.2% | 92.6% |
| 5z2lA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 45.0 | 4.14e-01 | 92.6% | 86.2% |
| 2jjmA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 47.0 | 4.72e-01 | 96.0% | 93.9% |
| 2ew8B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 45.0 | 4.22e-01 | 94.9% | 87.7% |
| 1rkxA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 42.0 | 4.16e-01 | 86.4% | 100.0% |
| 1k6jB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 43.0 | 4.16e-01 | 89.2% | 99.5% |
| 4b79B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 45.0 | 4.15e-01 | 94.3% | 86.3% |
| 4f2gA02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.52 | 39.0 | 4.28e-01 | 90.9% | 96.5% |
| 2a4kB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 44.0 | 4.30e-01 | 93.8% | 87.8% |
| 1ipaA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.50 | 38.0 | 4.08e-01 | 86.9% | 90.8% |
| 3sdsA02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.50 | 42.0 | 4.35e-01 | 90.9% | 96.2% |
| 3gyqA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.50 | 39.0 | 4.04e-01 | 86.9% | 86.6% |
| 2vn8A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 45.0 | 4.46e-01 | 100.0% | 92.3% |
| 1v8bA01 | 3.40.50.1480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Adenosylhomocysteinase-like | 0.50 | 44.0 | 3.69e-01 | 97.2% | 76.8% |
ECOD (96)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.98 | 95.0 | 9.36e-01 | 98.9% | 94.1% | |
| 4271040 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.98 | 95.0 | 9.48e-01 | 98.9% | 96.7% |
| 2034290 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.98 | 96.0 | 9.26e-01 | 100.0% | 91.7% |
| None | — | 0.96 | 88.0 | 8.84e-01 | 96.6% | 94.3% | |
| 4948361 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.94 | 66.0 | 7.86e-01 | 92.6% | 100.0% |
| 4078594 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.94 | 84.0 | 8.24e-01 | 96.0% | 87.0% |
| 4667956 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.94 | 83.0 | 8.60e-01 | 96.6% | 97.0% |
| 4012264 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.93 | 88.0 | 8.40e-01 | 96.6% | 92.8% |
| None | — | 0.93 | 83.0 | 8.35e-01 | 94.9% | 92.0% | |
| 3699846 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.92 | 86.0 | 8.60e-01 | 100.0% | 95.0% |
| 4928170 | 253.1.1.3 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_synth | 0.92 | 80.0 | 6.36e-01 | 94.9% | 49.8% |
| None | — | 0.90 | 79.0 | 8.12e-01 | 94.3% | 94.1% | |
| 5036187 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.89 | 79.0 | 7.62e-01 | 96.6% | 82.6% |
| 3609439 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.88 | 82.0 | 8.18e-01 | 100.0% | 95.0% |
| 4406429 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.87 | 81.0 | 8.22e-01 | 99.4% | 97.1% |
| 5056286 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.86 | 79.0 | 7.86e-01 | 98.9% | 93.3% |
| 5041133 | 2005.1.1.20 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI | 0.80 | 69.0 | 6.32e-01 | 98.3% | 71.8% |
| 4989452 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.80 | 67.0 | 6.85e-01 | 98.9% | 90.6% |
| 4952835 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.79 | 68.0 | 6.94e-01 | 98.9% | 91.8% |
| 4999088 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.79 | 67.0 | 6.51e-01 | 99.4% | 80.0% |
| 5074926 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.79 | 67.0 | 6.23e-01 | 99.4% | 72.6% |
| 5015697 | 2005.1.1.20 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI | 0.78 | 67.0 | 6.39e-01 | 95.5% | 78.5% |
| 3838008 | 2005.1.1.23 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans | 0.78 | 72.0 | 6.29e-01 | 96.6% | 84.4% |
| 5035048 | 2005.1.1.20 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI | 0.78 | 66.0 | 6.20e-01 | 95.5% | 75.6% |
| 5022267 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.77 | 63.0 | 5.57e-01 | 99.4% | 60.4% |
| None | — | 0.77 | 67.0 | 6.20e-01 | 96.0% | 74.8% | |
| 4947792 | 2005.1.1.20 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI | 0.77 | 67.0 | 6.24e-01 | 95.5% | 75.6% |
| 4965856 | 2005.1.1.20 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI | 0.76 | 67.0 | 6.26e-01 | 97.2% | 76.7% |
| None | — | 0.76 | 66.0 | 6.17e-01 | 96.6% | 74.9% | |
| None | — | 0.76 | 71.0 | 6.43e-01 | 99.4% | 86.5% | |
| 4933306 | 2005.1.1.20 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI | 0.75 | 65.0 | 6.13e-01 | 97.2% | 75.7% |
| 5079620 | 2005.1.1.20 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI | 0.75 | 65.0 | 6.01e-01 | 97.2% | 74.0% |
| None | — | 0.75 | 66.0 | 6.11e-01 | 97.7% | 75.3% | |
| 4536847 | 2005.1.1.23 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans | 0.75 | 71.0 | 6.55e-01 | 100.0% | 85.6% |
| None | — | 0.75 | 68.0 | 6.59e-01 | 96.0% | 89.7% | |
| 5044033 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.74 | 70.0 | 5.82e-01 | 99.4% | 74.4% |
| 4943110 | 2005.1.1.111 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › GMP_synt_C | 0.74 | 67.0 | 6.42e-01 | 98.3% | 84.5% |
| None | — | 0.74 | 67.0 | 6.31e-01 | 95.5% | 84.4% | |
| 4073364 | 2005.1.1.38 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTU2 | 0.73 | 69.0 | 5.59e-01 | 99.4% | 70.6% |
| 4172759 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.73 | 63.0 | 6.09e-01 | 94.9% | 81.5% |
| None | — | 0.73 | 66.0 | 5.99e-01 | 96.0% | 77.8% | |
| 4601377 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.73 | 66.0 | 6.02e-01 | 96.0% | 80.0% |
| 4928871 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.72 | 68.0 | 5.98e-01 | 99.4% | 85.3% |
| None | — | 0.72 | 66.0 | 5.94e-01 | 96.0% | 78.3% | |
| 4930592 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.72 | 65.0 | 5.95e-01 | 94.9% | 82.7% |
| 4941917 | 2005.1.1.70 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DUF7411 | 0.72 | 65.0 | 6.18e-01 | 95.5% | 100.0% |
| 4125125 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.71 | 64.0 | 6.00e-01 | 94.3% | 86.2% |
| 5026434 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.71 | 65.0 | 5.23e-01 | 97.2% | 58.4% |
| None | — | 0.71 | 64.0 | 5.84e-01 | 95.5% | 80.9% | |
| None | — | 0.71 | 63.0 | 5.88e-01 | 94.3% | 84.2% | |
| None | — | 0.70 | 63.0 | 5.90e-01 | 94.9% | 81.9% | |
| None | — | 0.70 | 64.0 | 5.89e-01 | 95.5% | 81.2% | |
| 3789499 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.70 | 65.0 | 5.66e-01 | 98.9% | 72.7% |
| None | — | 0.70 | 64.0 | 5.90e-01 | 96.6% | 84.1% | |
| None | — | 0.70 | 64.0 | 5.82e-01 | 96.0% | 81.3% | |
| 4192836 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.70 | 63.0 | 5.66e-01 | 95.5% | 80.0% |
| None | — | 0.70 | 63.0 | 5.63e-01 | 95.5% | 74.5% | |
| 4127143 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.70 | 63.0 | 5.63e-01 | 95.5% | 74.5% |
| 4976396 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.70 | 63.0 | 5.58e-01 | 96.6% | 81.1% |
| 3281499 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.70 | 63.0 | 5.79e-01 | 95.5% | 78.2% |
| 4991573 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.70 | 64.0 | 5.84e-01 | 97.2% | 82.2% |
| 5015379 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.69 | 66.0 | 5.67e-01 | 100.0% | 75.0% |
| 4214089 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.69 | 65.0 | 4.95e-01 | 99.4% | 64.7% |
| 3956153 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.69 | 65.0 | 5.13e-01 | 99.4% | 66.5% |
| 4241012 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.69 | 63.0 | 5.78e-01 | 96.6% | 80.8% |
| 4538553 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.69 | 63.0 | 5.82e-01 | 95.5% | 84.7% |
| 4037820 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.69 | 63.0 | 5.83e-01 | 96.0% | 81.9% |
| None | — | 0.69 | 61.0 | 5.66e-01 | 94.3% | 81.4% | |
| None | — | 0.69 | 62.0 | 5.60e-01 | 95.5% | 82.6% | |
| 4308342 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.68 | 63.0 | 5.89e-01 | 97.2% | 82.4% |
| 4968614 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.68 | 63.0 | 5.61e-01 | 99.4% | 83.3% |
| 5040896 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.68 | 46.0 | 5.15e-01 | 93.2% | 88.9% |
| 4032408 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.66 | 45.0 | 5.19e-01 | 86.9% | 96.8% |
| 5077342 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.65 | 48.0 | 5.29e-01 | 92.0% | 94.3% |
| 3260120 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.64 | 42.0 | 4.70e-01 | 92.0% | 85.2% |
| 3507640 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.62 | 56.0 | 5.47e-01 | 98.9% | 99.0% |
| 4999527 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.58 | 48.0 | 5.05e-01 | 89.8% | 96.9% |
| 145257 | 2003.1.1.69 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 | 0.58 | 51.0 | 4.49e-01 | 94.9% | 88.0% |
| 4943860 | 7518.1.1.0 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like | 0.57 | 48.0 | 4.73e-01 | 88.1% | 97.8% |
| None | — | 0.57 | 52.0 | 4.46e-01 | 97.7% | 81.5% | |
| 4581939 | 2003.1.1.61 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR | 0.57 | 49.0 | 4.26e-01 | 92.0% | 81.9% |
| 5075895 | 7514.1.1.8 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › DHODB_Fe-S_bind | 0.57 | 45.0 | 4.61e-01 | 87.5% | 84.5% |
| 3903651 | 2004.1.1.61 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › FTHFS | 0.56 | 50.0 | 3.47e-01 | 96.0% | 68.9% |
| 3829698 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.56 | 50.0 | 4.00e-01 | 96.0% | 69.6% |
| 3786130 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.56 | 41.0 | 4.58e-01 | 92.0% | 98.5% |
| 3960758 | 2003.1.1.152 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR, GDP_Man_Dehyd | 0.55 | 48.0 | 4.24e-01 | 94.9% | 77.4% |
| 5060340 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.55 | 47.0 | 3.98e-01 | 94.9% | 98.4% |
| 4425802 | 2003.1.1.69 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 | 0.55 | 48.0 | 4.13e-01 | 96.0% | 84.9% |
| 3202105 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.54 | 47.0 | 3.88e-01 | 95.5% | 80.3% |
| 3180980 | 2003.1.7.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › IF-2B | 0.54 | 46.0 | 4.31e-01 | 90.9% | 84.1% |
| 5050225 | 2004.1.1.211 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P | 0.53 | 47.0 | 4.48e-01 | 95.5% | 91.9% |
| None | — | 0.53 | 47.0 | 3.71e-01 | 95.5% | 92.1% | |
| 4136884 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.53 | 46.0 | 4.33e-01 | 93.8% | 95.5% |
| 4484792 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.53 | 35.0 | 4.05e-01 | 75.6% | 92.8% |
| 4991370 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.53 | 34.0 | 4.01e-01 | 75.6% | 92.0% |
| 1395085 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.52 | 45.0 | 4.12e-01 | 94.3% | 89.7% |
D2
medium
residues 194-237_260-300
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20979.3 best | Arginosuc_syn_C | 43.7 | 3.50e-11 | 72.9% | 19.2% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1j20A02 | 3.90.1260.10 | Alpha Beta › Alpha-Beta Complex › Argininosuccinate synthetase, chain A, domain 2 › Argininosuccinate synthetase, chain A, domain 2 | 0.90 | 86.0 | 6.14e-01 | 100.0% | 48.8% |
| 4xfjA02 | 3.90.1260.10 | Alpha Beta › Alpha-Beta Complex › Argininosuccinate synthetase, chain A, domain 2 › Argininosuccinate synthetase, chain A, domain 2 | 0.87 | 82.0 | 6.10e-01 | 98.8% | 55.1% |
| 1xppD00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.62 | 41.0 | 3.92e-01 | 98.8% | 57.4% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 40.0 | 4.16e-01 | 98.8% | 73.1% |
| 4lfhD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 38.0 | 3.88e-01 | 98.8% | 65.9% |
| 4bfeA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 36.0 | 3.76e-01 | 98.8% | 65.4% |
| 3c0wA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.57 | 41.0 | 3.63e-01 | 97.6% | 52.5% |
| 2ab5B01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.57 | 41.0 | 3.55e-01 | 97.6% | 50.0% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 37.0 | 3.65e-01 | 84.7% | 63.0% |
| 4qjvB00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.56 | 38.0 | 3.74e-01 | 98.8% | 64.9% |
| 4i0kA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 39.0 | 3.78e-01 | 98.8% | 65.3% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.55 | 34.0 | 3.45e-01 | 91.8% | 61.0% |
| 1qd1B02 | 3.30.70.670 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Formiminotransferase, C-terminal subdomain | 0.55 | 37.0 | 3.19e-01 | 92.9% | 40.7% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.55 | 36.0 | 3.15e-01 | 92.9% | 40.9% |
| 3njcA00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.54 | 42.0 | 3.54e-01 | 100.0% | 47.7% |
| 6x4tA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 37.0 | 3.73e-01 | 97.6% | 71.8% |
| 4f80A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 37.0 | 3.64e-01 | 98.8% | 66.7% |
| 1ug8A00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.53 | 38.0 | 3.81e-01 | 100.0% | 74.7% |
| 3n79A01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.53 | 32.0 | 3.30e-01 | 89.4% | 64.1% |
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 36.0 | 3.52e-01 | 84.7% | 62.9% |
| 1fp5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.78e-01 | 100.0% | 70.0% |
| 2b3tA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 34.0 | 2.68e-01 | 98.8% | 31.2% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.50 | 33.0 | 3.00e-01 | 87.1% | 47.1% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4531890 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.89 | 85.0 | 5.88e-01 | 100.0% | 44.5% |
| 4121287 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.89 | 85.0 | 5.96e-01 | 100.0% | 45.2% |
| 4470391 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.89 | 85.0 | 5.93e-01 | 100.0% | 44.3% |
| 3599779 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.89 | 85.0 | 5.88e-01 | 100.0% | 43.2% |
| None | — | 0.89 | 84.0 | 6.27e-01 | 100.0% | 54.7% | |
| 4249217 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.89 | 84.0 | 5.97e-01 | 98.8% | 47.2% |
| 4113748 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.89 | 84.0 | 5.96e-01 | 100.0% | 46.2% |
| 4667953 | 253.1.1.0 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C | 0.89 | 84.0 | 5.95e-01 | 100.0% | 46.2% |
| 4248401 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.88 | 83.0 | 5.81e-01 | 100.0% | 42.9% |
| 4467214 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.88 | 83.0 | 5.77e-01 | 100.0% | 43.3% |
| 4092481 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.86 | 81.0 | 5.74e-01 | 100.0% | 44.8% |
| 5025552 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.86 | 80.0 | 5.66e-01 | 100.0% | 43.8% |
| 4322970 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.85 | 80.0 | 5.63e-01 | 100.0% | 43.9% |
| 4629994 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.84 | 79.0 | 5.62e-01 | 98.8% | 45.5% |
| 4928170 | 253.1.1.3 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_synth | 0.72 | 62.0 | 4.02e-01 | 100.0% | 23.8% |
| 5028314 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.64 | 45.0 | 4.17e-01 | 100.0% | 58.1% |
| 3603294 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.63 | 44.0 | 4.31e-01 | 98.8% | 67.8% |
| 4443601 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.61 | 40.0 | 4.08e-01 | 92.9% | 67.1% |
| 5027827 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.61 | 39.0 | 3.99e-01 | 92.9% | 65.9% |
| 4962953 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.58 | 38.0 | 4.07e-01 | 98.8% | 77.3% |
| 4389430 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.58 | 42.0 | 3.89e-01 | 98.8% | 60.0% |
| 4943870 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.56 | 44.0 | 4.04e-01 | 98.8% | 63.5% |
| 4048493 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.55 | 35.0 | 3.59e-01 | 91.8% | 67.5% |
| 4515869 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.55 | 35.0 | 3.47e-01 | 91.8% | 60.7% |
| 140759 | 873.1.1.6 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › DUF2507 | 0.54 | 42.0 | 3.60e-01 | 100.0% | 50.3% |
| 2859181 | 11.1.1.587 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › VEGFR1-3_N_Ig-like | 0.52 | 37.0 | 3.70e-01 | 100.0% | 74.1% |
| 5077552 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.52 | 33.0 | 3.29e-01 | 91.8% | 57.9% |
| 5027134 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.52 | 37.0 | 3.30e-01 | 96.5% | 51.2% |
| 4980535 | 101.1.2.914 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6015 | 0.52 | 33.0 | 3.21e-01 | 96.5% | 56.8% |
| 3603753 | 3008.1.1.2 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DUF5915 | 0.51 | 33.0 | 3.24e-01 | 92.9% | 62.9% |
| 5071805 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.50 | 41.0 | 3.36e-01 | 100.0% | 47.5% |
| 5053097 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.50 | 35.0 | 3.40e-01 | 89.4% | 65.3% |
D3
medium
residues 238-259_301-385
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k92A02 | 3.90.1260.10 | Alpha Beta › Alpha-Beta Complex › Argininosuccinate synthetase, chain A, domain 2 › Argininosuccinate synthetase, chain A, domain 2 | 1.00 | 93.0 | 6.99e-01 | 94.4% | 66.0% |
| 4xfjA02 | 3.90.1260.10 | Alpha Beta › Alpha-Beta Complex › Argininosuccinate synthetase, chain A, domain 2 › Argininosuccinate synthetase, chain A, domain 2 | 0.94 | 90.0 | 7.23e-01 | 100.0% | 77.5% |
| 1j20A02 | 3.90.1260.10 | Alpha Beta › Alpha-Beta Complex › Argininosuccinate synthetase, chain A, domain 2 › Argininosuccinate synthetase, chain A, domain 2 | 0.93 | 87.0 | 6.65e-01 | 96.3% | 66.2% |
| 5dmxB02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.67 | 44.0 | 3.78e-01 | 96.3% | 45.5% |
| 1z2nX02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.61 | 41.0 | 4.14e-01 | 96.3% | 67.9% |
| 3vpbB03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.57 | 41.0 | 4.07e-01 | 96.3% | 71.4% |
| 1tkeA03 | 3.30.54.20 | Alpha Beta › 2-Layer Sandwich › Replication Terminator Protein; Chain A, domain 2 › | 0.56 | 27.0 | 3.53e-01 | 92.5% | 84.5% |
| 1iowA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.55 | 44.0 | 3.85e-01 | 96.3% | 59.7% |
| 1e4eB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 44.0 | 3.84e-01 | 96.3% | 62.2% |
| 2iskA01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.51 | 35.0 | 2.92e-01 | 70.1% | 91.2% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4249217 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.95 | 93.0 | 7.01e-01 | 100.0% | 66.5% |
| 3599779 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.95 | 92.0 | 6.72e-01 | 100.0% | 59.7% |
| 4629994 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.95 | 92.0 | 6.91e-01 | 100.0% | 65.9% |
| None | — | 0.94 | 91.0 | 7.25e-01 | 100.0% | 76.3% | |
| 4467214 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.94 | 91.0 | 6.70e-01 | 100.0% | 60.4% |
| 4248401 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.94 | 91.0 | 6.69e-01 | 100.0% | 60.4% |
| 5025552 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.94 | 91.0 | 6.73e-01 | 100.0% | 61.7% |
| 4121287 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.94 | 91.0 | 6.77e-01 | 100.0% | 63.0% |
| 4470391 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.94 | 91.0 | 6.71e-01 | 100.0% | 62.1% |
| 5037588 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.94 | 86.0 | 7.01e-01 | 100.0% | 56.7% |
| 4113748 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.94 | 90.0 | 6.79e-01 | 100.0% | 64.4% |
| 4667953 | 253.1.1.0 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C | 0.94 | 90.0 | 6.78e-01 | 100.0% | 64.4% |
| 4322970 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.93 | 90.0 | 6.70e-01 | 100.0% | 63.0% |
| 4531890 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.93 | 90.0 | 6.57e-01 | 100.0% | 61.2% |
| 4092481 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.93 | 90.0 | 6.69e-01 | 100.0% | 63.0% |
| 3716062 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.93 | 89.0 | 6.92e-01 | 100.0% | 67.8% |
| 3592378 | 253.1.1.0 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C | 0.92 | 88.0 | 7.05e-01 | 100.0% | 72.6% |
| 2777647 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.66 | 41.0 | 3.41e-01 | 96.3% | 37.2% |
| 980877 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.62 | 42.0 | 3.44e-01 | 96.3% | 40.1% |
| 5046855 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.61 | 43.0 | 3.37e-01 | 96.3% | 37.9% |
| 3830939 | 206.1.3.18 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › D123 | 0.58 | 40.0 | 2.86e-01 | 96.3% | 26.0% |
| 4048953 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.57 | 46.0 | 3.63e-01 | 97.2% | 42.3% |
| 5067822 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.56 | 35.0 | 3.50e-01 | 74.8% | 60.0% |
| 4955912 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.55 | 43.0 | 4.08e-01 | 85.0% | 87.7% |
| 3510399 | 206.1.3.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Synapsin_C | 0.54 | 39.0 | 3.08e-01 | 97.2% | 37.2% |
| 3739102 | 4020.1.1.1 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › Aminotran_4 | 0.53 | 34.0 | 4.06e-01 | 95.3% | 100.0% |
| None | — | 0.52 | 46.0 | 3.43e-01 | 96.3% | 46.2% | |
| 4217900 | 3009.1.1.3 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Thioredoxin_5 | 0.51 | 34.0 | 2.75e-01 | 71.0% | 34.0% |
| 3611992 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.51 | 40.0 | 3.75e-01 | 86.9% | 97.1% |
| 3273565 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.50 | 39.0 | 3.61e-01 | 84.1% | 95.0% |
D4
medium
residues 386-447
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k92A03 | 1.10.287.400 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.86 | 73.0 | 7.20e-01 | 88.7% | 87.5% |