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CAKLQF020000046.1__CAH1096752.1__SAMEA5780031_04056__00005
Bact-VirCAKLQF020000046.1__CAH1096752.1__SAMEA5780031_04056__00005
Identity
- Kingdom:
- phage
Quality
78.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 53-101
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13737.13 best | DDE_Tnp_1_5 | 67.5 | 1.90e-18 | 100.0% | 43.8% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zooA02 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.73 | 60.0 | 4.60e-01 | 98.0% | 53.3% |
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 51.0 | 5.33e-01 | 100.0% | 86.4% |
| 1k78I00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 59.0 | 5.67e-01 | 100.0% | 86.2% |
| 1yg2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 55.0 | 4.81e-01 | 98.0% | 60.8% |
| 4nuuB02 | 1.20.58.830 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 48.0 | 3.52e-01 | 79.6% | 35.0% |
| 3vw4A01 | 1.10.340.50 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.63 | 51.0 | 4.31e-01 | 98.0% | 69.6% |
| 1k6yA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.62 | 45.0 | 4.59e-01 | 100.0% | 84.8% |
| 2cufA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 50.0 | 4.52e-01 | 95.9% | 80.6% |
| 3hc1A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.62 | 52.0 | 3.29e-01 | 100.0% | 42.3% |
| 2zueA01 | 3.30.1360.70 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Arginyl tRNA synthetase N-terminal domain | 0.61 | 46.0 | 3.70e-01 | 89.8% | 50.4% |
| 4egvB01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.61 | 49.0 | 2.93e-01 | 91.8% | 17.6% |
| 4i5jA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.61 | 44.0 | 3.18e-01 | 81.6% | 57.3% |
| 6wgyA02 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.60 | 50.0 | 4.09e-01 | 100.0% | 97.0% |
| 2j4jF00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.59 | 48.0 | 3.25e-01 | 100.0% | 81.0% |
| 3i6dA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 45.0 | 3.24e-01 | 87.8% | 34.4% |
| 2r1jL00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.57 | 40.0 | 3.69e-01 | 98.0% | 56.1% |
| 2ctoA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.57 | 38.0 | 3.67e-01 | 71.4% | 70.5% |
| 1br2A04 | 1.20.58.530 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 45.0 | 3.29e-01 | 100.0% | 68.3% |
| 1a79A02 | 3.40.1170.20 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › tRNA intron endonuclease, N-terminal domain | 0.55 | 41.0 | 3.67e-01 | 81.6% | 97.2% |
| 3b9wA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.54 | 43.0 | 2.56e-01 | 85.7% | 37.6% |
| 3r4cA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.53 | 41.0 | 3.33e-01 | 87.8% | 95.0% |
| 3adoA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 41.0 | 2.92e-01 | 100.0% | 40.3% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4960595 | 101.1.1.549 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_1_5 | 0.88 | 78.0 | 6.52e-01 | 100.0% | 60.0% |
| 3924434 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 73.0 | 6.30e-01 | 100.0% | 64.0% |
| 5076626 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.77 | 65.0 | 4.51e-01 | 95.9% | 53.4% |
| 3931733 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 66.0 | 5.56e-01 | 100.0% | 69.4% |
| 3909751 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.74 | 63.0 | 5.70e-01 | 100.0% | 72.9% |
| 3661620 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 62.0 | 5.74e-01 | 100.0% | 76.9% |
| 3369321 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.72 | 61.0 | 5.83e-01 | 100.0% | 85.0% |
| 3317835 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 61.0 | 5.52e-01 | 100.0% | 71.4% |
| 3927243 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 61.0 | 5.97e-01 | 100.0% | 90.9% |
| 3687544 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 60.0 | 4.27e-01 | 100.0% | 43.1% |
| 3894364 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 60.0 | 5.83e-01 | 100.0% | 90.9% |
| 5006044 | 206.1.1.268 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF6206 | 0.71 | 61.0 | 3.79e-01 | 100.0% | 19.0% |
| 3907900 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.71 | 59.0 | 5.65e-01 | 100.0% | 85.0% |
| 3314239 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 59.0 | 5.63e-01 | 100.0% | 83.3% |
| 3891361 | 4202.1.1.0 ↗ | alpha duplicates or obligate multimers › Hermes dimerisation domain › Hermes dimerisation domain › Hermes dimerisation domain | 0.71 | 59.0 | 5.64e-01 | 100.0% | 83.3% |
| 3517882 | 2484.1.1.215 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 | 0.71 | 59.0 | 3.48e-01 | 100.0% | 11.9% |
| 3338071 | 2484.1.1.215 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 | 0.70 | 59.0 | 4.16e-01 | 100.0% | 30.3% |
| 3680415 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 57.0 | 5.13e-01 | 100.0% | 66.7% |
| 4946290 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 58.0 | 5.40e-01 | 100.0% | 80.0% |
| 3806070 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.68 | 58.0 | 5.84e-01 | 100.0% | 98.0% |
| 3876674 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 53.0 | 4.57e-01 | 100.0% | 62.2% |
| 3487276 | 101.1.4.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou | 0.65 | 55.0 | 4.28e-01 | 100.0% | 43.8% |
| 3353701 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.64 | 55.0 | 4.42e-01 | 100.0% | 54.0% |
| 3362674 | 109.4.1.1455 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27814 | 0.64 | 50.0 | 3.14e-01 | 85.7% | 34.8% |
| 3719981 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.63 | 54.0 | 4.46e-01 | 100.0% | 64.2% |
| 3602043 | 6076.1.1.0 ↗ | alpha arrays › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme | 0.63 | 53.0 | 4.26e-01 | 98.0% | 100.0% |
| 3275589 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.63 | 49.0 | 4.02e-01 | 95.9% | 87.0% |
| 3251747 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 50.0 | 5.01e-01 | 93.9% | 94.0% |
| 4934293 | 4993.1.1.0 ↗ | extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit | 0.62 | 51.0 | 4.48e-01 | 100.0% | 68.8% |
| 3607327 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 49.0 | 4.73e-01 | 100.0% | 86.7% |
| 3818288 | 109.4.1.1455 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27814 | 0.60 | 49.0 | 3.13e-01 | 91.8% | 36.4% |
| 4960514 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 47.0 | 3.96e-01 | 98.0% | 48.0% |
| 3736272 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.59 | 49.0 | 3.43e-01 | 93.9% | 86.1% |
| 3314830 | 101.42.1.0 ↗ | alpha arrays › HTH › CC2 domain in SUN proteins › CC2 domain in SUN proteins | 0.59 | 49.0 | 4.51e-01 | 100.0% | 74.3% |
| 3564291 | 101.1.1.66 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_5 | 0.57 | 45.0 | 4.01e-01 | 100.0% | 74.1% |
| 4535037 | 3754.1.1.1 ↗ | alpha bundles › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Glycos_transf_4 | 0.55 | 44.0 | 2.72e-01 | 89.8% | 93.4% |
| 5049330 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.54 | 42.0 | 2.94e-01 | 85.7% | 35.6% |