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CAKLQF020000046.1__CAH1096755.1__SAMEA5780031_04057__00006
Bact-VirCAKLQF020000046.1__CAH1096755.1__SAMEA5780031_04057__00006
Identity
- Kingdom:
- phage
Quality
85.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-135
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19112.7 best | VanA_C | 43.8 | 4.60e-11 | 94.7% | 56.5% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7szeB02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.80 | 74.0 | 6.52e-01 | 100.0% | 70.7% |
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.79 | 52.0 | 5.24e-01 | 74.2% | 66.7% |
| 4fpwB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.77 | 48.0 | 4.52e-01 | 76.5% | 51.6% |
| 2ffsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.77 | 54.0 | 5.28e-01 | 79.5% | 66.2% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.76 | 55.0 | 5.35e-01 | 75.8% | 68.8% |
| 4xrtA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.72 | 52.0 | 5.13e-01 | 78.0% | 69.0% |
| 8es5A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.72 | 48.0 | 4.78e-01 | 78.8% | 65.2% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.69 | 51.0 | 4.88e-01 | 77.3% | 66.0% |
| 4xrtA02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.68 | 51.0 | 4.84e-01 | 79.5% | 70.6% |
| 4bboA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.60 | 40.0 | 4.29e-01 | 87.1% | 78.8% |
| 4fuvA00 | 2.40.160.170 | Mainly Beta › Beta Barrel › Porin › | 0.60 | 48.0 | 4.04e-01 | 84.1% | 79.3% |
| 2obdA02 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.59 | 46.0 | 4.09e-01 | 81.8% | 96.3% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.58 | 34.0 | 4.29e-01 | 90.9% | 97.5% |
| 4bj8K00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.57 | 40.0 | 4.24e-01 | 76.5% | 80.0% |
| 4avaA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 51.0 | 4.53e-01 | 96.2% | 100.0% |
| 4hwmA00 | 2.40.128.500 | Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein | 0.57 | 35.0 | 3.72e-01 | 91.7% | 69.2% |
| 5nz7A01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.56 | 47.0 | 3.48e-01 | 90.9% | 91.6% |
| 2xqyA01 | 3.30.500.50 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.55 | 48.0 | 4.38e-01 | 96.2% | 92.1% |
| 1kfiA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.54 | 38.0 | 3.88e-01 | 74.2% | 75.2% |
| 1usuB00 | 3.15.10.20 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Activator of Hsp90 ATPase Aha1, N-terminal domain | 0.53 | 43.0 | 4.31e-01 | 84.8% | 94.7% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.52 | 44.0 | 3.96e-01 | 100.0% | 66.7% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.52 | 38.0 | 3.71e-01 | 81.1% | 68.7% |
| 2i79D00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 35.0 | 3.23e-01 | 70.5% | 70.1% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.50 | 42.0 | 3.99e-01 | 89.4% | 78.1% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3947246 | 331.3.1.19 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C | 0.91 | 87.0 | 7.36e-01 | 100.0% | 66.0% |
| 4993408 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.80 | 57.0 | 5.27e-01 | 78.0% | 60.0% |
| 3282714 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.78 | 56.0 | 5.46e-01 | 75.8% | 68.1% |
| 3288017 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.77 | 57.0 | 5.49e-01 | 75.8% | 69.0% |
| 5038503 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.77 | 53.0 | 5.30e-01 | 74.2% | 68.9% |
| 3301111 | 331.3.1.25 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PaO | 0.76 | 55.0 | 5.53e-01 | 76.5% | 73.3% |
| 3959610 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.75 | 57.0 | 5.76e-01 | 78.8% | 79.7% |
| 3955267 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.75 | 57.0 | 5.74e-01 | 80.3% | 78.4% |
| 3257765 | 331.3.1.7 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG | 0.74 | 55.0 | 5.04e-01 | 76.5% | 64.7% |
| 3277839 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.74 | 57.0 | 5.43e-01 | 78.8% | 70.7% |
| 3949576 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.74 | 55.0 | 5.15e-01 | 77.3% | 63.1% |
| 3278071 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.74 | 57.0 | 5.42e-01 | 78.8% | 69.3% |
| 3277897 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.73 | 53.0 | 5.06e-01 | 78.8% | 65.3% |
| 3962288 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.73 | 51.0 | 5.18e-01 | 71.2% | 76.2% |
| 4929661 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.73 | 54.0 | 5.01e-01 | 75.8% | 64.4% |
| 3313814 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.73 | 55.0 | 4.97e-01 | 78.8% | 61.7% |
| 3654098 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.72 | 55.0 | 4.74e-01 | 78.8% | 67.2% |
| 5041562 | 331.3.1.26 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2867 | 0.72 | 52.0 | 4.89e-01 | 75.0% | 83.1% |
| 3507449 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.71 | 53.0 | 4.51e-01 | 77.3% | 58.0% |
| 3215328 | 331.3.1.20 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C | 0.71 | 60.0 | 4.96e-01 | 100.0% | 51.5% |
| 3965583 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.69 | 49.0 | 4.85e-01 | 75.8% | 68.6% |
| 3981106 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.68 | 49.0 | 4.74e-01 | 77.3% | 65.3% |
| 3961324 | 331.3.1.20 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C | 0.68 | 61.0 | 5.21e-01 | 100.0% | 61.0% |
| 5040875 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.67 | 51.0 | 4.85e-01 | 80.3% | 67.1% |
| 1715838 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.65 | 49.0 | 4.71e-01 | 79.5% | 71.6% |
| 3482064 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.64 | 54.0 | 5.11e-01 | 90.9% | 82.3% |
| 3581277 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.64 | 48.0 | 4.31e-01 | 79.5% | 97.9% |
| 3578827 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.64 | 48.0 | 4.34e-01 | 79.5% | 96.2% |
| 5009577 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.63 | 48.0 | 4.93e-01 | 78.8% | 84.0% |
| 5022744 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.58 | 39.0 | 3.90e-01 | 74.2% | 65.9% |
| 3843733 | 9.1.1.12 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd | 0.57 | 51.0 | 4.71e-01 | 96.2% | 90.2% |
| 3736590 | 9.14.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W | 0.56 | 39.0 | 4.40e-01 | 93.9% | 95.0% |
| 3414586 | 11.1.1.824 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Chitin_bind_4 | 0.53 | 35.0 | 4.13e-01 | 99.2% | 95.7% |
| 3934097 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.53 | 45.0 | 4.41e-01 | 89.4% | 92.9% |
| 3616043 | 216.1.1.19 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med14_RM6 | 0.53 | 38.0 | 3.70e-01 | 87.9% | 66.7% |
| 4958029 | 12.3.1.75 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GDE_N_bis | 0.52 | 39.0 | 3.24e-01 | 77.3% | 50.5% |
| 3339690 | 9.23.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 | 0.51 | 41.0 | 4.08e-01 | 93.9% | 83.0% |
| 3375268 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.51 | 43.0 | 3.56e-01 | 88.6% | 79.5% |
| 4264922 | 210.1.2.8 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › TANGO2 | 0.50 | 45.0 | 3.53e-01 | 97.0% | 90.5% |