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CAKLQH020000001.1__CAH1069516.1__SAMEA5780036_00016__00016
Bact-VirCAKLQH020000001.1__CAH1069516.1__SAMEA5780036_00016__00016
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-90_130-159
Domain cluster:
rep: IMGVR_UViG_3300002123_000235-3300002123-C687J26634_1000017526__D5-94_129-160
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f1fA02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.68 | 34.0 | 3.93e-01 | 85.3% | 65.4% |
| 1xexB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 44.0 | 3.89e-01 | 82.6% | 48.4% |
| 2cxcA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.63 | 37.0 | 4.42e-01 | 78.0% | 89.9% |
| 4mh4A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.63 | 45.0 | 4.83e-01 | 75.2% | 91.5% |
| 1f2uB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 43.0 | 3.97e-01 | 78.0% | 53.8% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.62 | 37.0 | 4.26e-01 | 80.7% | 85.3% |
| 7r7eA01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.60 | 40.0 | 3.95e-01 | 79.8% | 63.0% |
| 4xrtA02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 46.0 | 4.13e-01 | 89.0% | 92.5% |
| 3rpjA00 | 3.30.310.230 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sigma factor-binding protein Crl monomer | 0.57 | 46.0 | 4.48e-01 | 90.8% | 88.1% |
| 1ldjA05 | 4.10.1030.10 | Few Secondary Structures › Irregular › Ring Box Chain A; domain 5 › Ring Box Chain A; domain 5 | 0.56 | 26.0 | 3.03e-01 | 89.9% | 60.8% |
| 8ex5A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.56 | 48.0 | 4.00e-01 | 94.5% | 92.7% |
| 1gpqB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.55 | 33.0 | 3.18e-01 | 74.3% | 49.2% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.55 | 32.0 | 3.04e-01 | 97.2% | 47.8% |
| 3ue3A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.55 | 39.0 | 4.14e-01 | 91.7% | 85.6% |
| 2i9yA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 43.0 | 3.86e-01 | 86.2% | 89.2% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.54 | 41.0 | 2.89e-01 | 82.6% | 75.5% |
| 1ti2B01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 36.0 | 3.39e-01 | 71.6% | 63.2% |
| 3w3aG00 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 36.0 | 3.00e-01 | 73.4% | 47.6% |
| 1y4uB01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 40.0 | 3.33e-01 | 91.7% | 47.4% |
| 2p92A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.51 | 39.0 | 4.10e-01 | 80.7% | 93.7% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.51 | 30.0 | 3.35e-01 | 78.0% | 79.2% |
| 4zudA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.50 | 39.0 | 3.01e-01 | 82.6% | 100.0% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3798829 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.78 | 43.0 | 3.33e-01 | 100.0% | 26.7% |
| 3220485 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.75 | 48.0 | 3.32e-01 | 100.0% | 20.6% |
| 4183868 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.71 | 50.0 | 5.68e-01 | 79.8% | 100.0% |
| 4978826 | 873.1.1.18 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HTH_24 | 0.67 | 42.0 | 3.31e-01 | 83.5% | 30.6% |
| 4991990 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.66 | 48.0 | 5.05e-01 | 89.0% | 83.0% |
| 4564327 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.66 | 48.0 | 5.32e-01 | 83.5% | 98.8% |
| 4027809 | 3871.1.1.0 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST | 0.64 | 45.0 | 4.13e-01 | 73.4% | 79.3% |
| 3440530 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.63 | 34.0 | 4.25e-01 | 73.4% | 98.2% |
| 4927597 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.62 | 34.0 | 3.31e-01 | 82.6% | 45.6% |
| 3221418 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.59 | 46.0 | 3.20e-01 | 100.0% | 26.1% |
| 4026685 | 150.1.1.51 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › PqiA | 0.59 | 48.0 | 3.67e-01 | 87.2% | 82.4% |
| 3907411 | 5001.1.1.111 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1, 7TM_GPCR_Srw | 0.59 | 45.0 | 3.16e-01 | 99.1% | 26.7% |
| 4948475 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.59 | 37.0 | 3.47e-01 | 84.4% | 49.3% |
| 4053989 | 304.9.1.71 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SNU71_RBD | 0.58 | 44.0 | 4.05e-01 | 78.9% | 84.3% |
| 3905302 | 284.1.3.8 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › Fy-3 | 0.57 | 39.0 | 4.32e-01 | 89.0% | 90.6% |
| 3649913 | 5050.1.1.58 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › NFD4_C | 0.57 | 41.0 | 3.49e-01 | 91.7% | 47.1% |
| 3560901 | 601.19.1.20 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Fy-3 | 0.57 | 38.0 | 4.34e-01 | 88.1% | 100.0% |
| 5026457 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.57 | 41.0 | 3.40e-01 | 77.1% | 47.1% |
| 4978793 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.56 | 36.0 | 3.21e-01 | 80.7% | 42.4% |
| 4016508 | 2485.2.1.0 ↗ | a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain | 0.56 | 36.0 | 3.70e-01 | 79.8% | 66.7% |
| 3774738 | 7529.1.1.11 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › DUF2362 | 0.56 | 38.0 | 4.20e-01 | 89.0% | 90.6% |
| 5052204 | 205.1.1.0 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin | 0.56 | 32.0 | 3.57e-01 | 71.6% | 70.6% |
| 2623930 | 4001.1.1.4 ↗ | a+b duplicates or obligate multimers › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › Cullin_AB | 0.56 | 35.0 | 3.53e-01 | 75.2% | 61.3% |
| 3410157 | 3926.1.1.0 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D | 0.56 | 39.0 | 3.55e-01 | 72.5% | 66.7% |
| 3857887 | 5094.1.1.11 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › Fy-3 | 0.55 | 37.0 | 4.20e-01 | 88.1% | 100.0% |
| 3814194 | 327.7.1.8 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › Peptidase_M16_M | 0.55 | 35.0 | 3.84e-01 | 79.8% | 81.2% |
| 4307607 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.54 | 41.0 | 3.21e-01 | 80.7% | 63.7% |
| 4444422 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 38.0 | 3.66e-01 | 73.4% | 80.5% |
| 3725746 | 4001.1.1.4 ↗ | a+b duplicates or obligate multimers › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › Cullin_AB | 0.53 | 37.0 | 3.58e-01 | 73.4% | 62.4% |
| 3969345 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.53 | 44.0 | 3.59e-01 | 92.7% | 88.6% |
| 4993592 | 205.1.1.17 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_11 | 0.53 | 38.0 | 3.13e-01 | 75.2% | 63.9% |
| 3217273 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 45.0 | 3.18e-01 | 93.6% | 64.7% |
| 3939245 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 44.0 | 3.10e-01 | 92.7% | 61.7% |
| 3734336 | 601.14.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › DUF3433 | 0.52 | 42.0 | 3.42e-01 | 88.1% | 59.5% |
| 3899483 | 3226.1.1.3 ↗ | alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › HCO3_cotransp | 0.52 | 44.0 | 2.91e-01 | 97.2% | 68.8% |
| 5055279 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.52 | 45.0 | 3.68e-01 | 95.4% | 93.2% |
| 4315686 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 42.0 | 2.93e-01 | 85.3% | 84.6% |
| 4972768 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.52 | 41.0 | 3.11e-01 | 87.2% | 35.8% |
| 3728487 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.51 | 41.0 | 3.43e-01 | 86.2% | 85.8% |
| 3684015 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.51 | 37.0 | 3.83e-01 | 100.0% | 83.0% |
| 3743859 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.51 | 42.0 | 2.96e-01 | 93.6% | 56.9% |
| 3980353 | 7573.1.1.0 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like | 0.51 | 43.0 | 3.19e-01 | 93.6% | 87.2% |
| 3607857 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 35.0 | 3.65e-01 | 71.6% | 96.0% |
| None | — | 0.50 | 45.0 | 3.17e-01 | 96.3% | 65.8% | |
| 3240839 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.50 | 45.0 | 3.17e-01 | 97.2% | 59.4% |
| 3491073 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.50 | 44.0 | 3.13e-01 | 96.3% | 67.3% |