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CAKLQH020000002.1__CAH1072739.1__SAMEA5780036_00510__00184
Bact-VirCAKLQH020000002.1__CAH1072739.1__SAMEA5780036_00510__00184
Identity
- Kingdom:
- phage
Quality
92.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 199-367
Domain cluster:
rep: IMGVR_UViG_3300013103_001684-3300013103-Ga0164318_100098847__D189-396
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13603.13 best | tRNA-synt_1_2 | 43.7 | 3.00e-11 | 65.1% | 53.5% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gaxA03 | 3.90.740.10 | Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain | 0.96 | 82.0 | 8.61e-01 | 100.0% | 95.4% |
| 1ileA02 | 3.90.740.10 | Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain | 0.81 | 78.0 | 7.37e-01 | 100.0% | 94.9% |
| 2ajgA00 | 3.90.740.10 | Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain | 0.79 | 74.0 | 7.16e-01 | 97.0% | 100.0% |
| 3pz6D00 | 3.90.740.10 | Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain | 0.79 | 74.0 | 6.30e-01 | 98.2% | 100.0% |
| 4k47A00 | 3.90.740.10 | Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain | 0.79 | 74.0 | 7.17e-01 | 97.0% | 100.0% |
| 2wfgA00 | 3.90.740.10 | Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain | 0.78 | 73.0 | 6.22e-01 | 97.0% | 100.0% |
| 1wkbA02 | 3.90.740.10 | Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain | 0.77 | 74.0 | 6.55e-01 | 100.0% | 98.7% |
| 1ffyA02 | 3.90.740.10 | Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain | 0.75 | 71.0 | 6.56e-01 | 100.0% | 92.3% |
| 3vkgA03 | 3.20.180.20 | Alpha Beta › Alpha-Beta Barrel › Split barrel-like › Dynein motor heavy chain, linker domain, subdomain 3 | 0.53 | 27.0 | 3.32e-01 | 87.0% | 76.0% |
| 1ckmA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 18.0 | 2.49e-01 | 76.3% | 59.0% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4886124 | 2005.1.1.91 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1_2 | 0.99 | 83.0 | 9.04e-01 | 98.8% | 99.3% |
| 4441921 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.98 | 82.0 | 8.78e-01 | 100.0% | 96.7% |
| 3539622 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.98 | 82.0 | 8.87e-01 | 98.2% | 99.3% |
| 4132407 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.97 | 95.0 | 8.80e-01 | 99.4% | 99.5% |
| 3739650 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.96 | 82.0 | 8.78e-01 | 100.0% | 98.0% |
| 4943174 | 1.1.1.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1 | 0.96 | 80.0 | 8.71e-01 | 99.4% | 99.3% |
| 4422221 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.96 | 81.0 | 8.62e-01 | 100.0% | 96.7% |
| 4928378 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.96 | 82.0 | 7.79e-01 | 100.0% | 77.4% |
| 5037526 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.95 | 80.0 | 8.70e-01 | 99.4% | 100.0% |
| 4254811 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.95 | 92.0 | 9.07e-01 | 98.8% | 98.9% |
| 4258911 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.95 | 92.0 | 9.24e-01 | 99.4% | 99.4% |
| 4980555 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.94 | 79.0 | 8.51e-01 | 99.4% | 99.3% |
| 4141444 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.93 | 91.0 | 7.96e-01 | 100.0% | 97.8% |
| 4490515 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.93 | 78.0 | 8.52e-01 | 97.0% | 100.0% |
| 4487379 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.93 | 81.0 | 8.61e-01 | 98.8% | 100.0% |
| 4043237 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.92 | 80.0 | 8.56e-01 | 98.8% | 100.0% |
| 3585206 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.91 | 81.0 | 8.55e-01 | 98.8% | 99.4% |
| 3928593 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.90 | 79.0 | 8.39e-01 | 98.2% | 100.0% |
| 4451351 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.90 | 83.0 | 8.46e-01 | 100.0% | 97.0% |
| 4679408 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.90 | 82.0 | 8.44e-01 | 100.0% | 98.8% |
| 3489987 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.89 | 82.0 | 8.50e-01 | 98.8% | 99.4% |
| 4123286 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.89 | 83.0 | 8.56e-01 | 98.2% | 100.0% |
| 4524726 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.88 | 86.0 | 8.65e-01 | 100.0% | 100.0% |
| 4616372 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.88 | 83.0 | 8.46e-01 | 100.0% | 98.8% |
| 3877236 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.88 | 83.0 | 8.45e-01 | 100.0% | 98.8% |
| 3771477 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.88 | 83.0 | 8.45e-01 | 100.0% | 98.8% |
| 3477647 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.85 | 83.0 | 8.32e-01 | 99.4% | 98.8% |
| 4078447 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.85 | 83.0 | 7.85e-01 | 100.0% | 100.0% |
| 4229086 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.85 | 82.0 | 7.90e-01 | 98.8% | 100.0% |
| 4952550 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.85 | 80.0 | 8.16e-01 | 99.4% | 98.8% |
| 4142507 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.84 | 81.0 | 7.67e-01 | 100.0% | 97.9% |
| 3385953 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.84 | 81.0 | 7.62e-01 | 100.0% | 100.0% |
| 4355247 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.83 | 80.0 | 7.61e-01 | 98.8% | 100.0% |
| 3839033 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.83 | 81.0 | 7.69e-01 | 100.0% | 100.0% |
| 4622447 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.83 | 81.0 | 7.52e-01 | 100.0% | 98.5% |
| 3964528 | 377.1.3.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1_2 | 0.83 | 81.0 | 7.52e-01 | 100.0% | 98.0% |
| 3164904 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.83 | 80.0 | 7.53e-01 | 99.4% | 100.0% |
| 4294300 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.83 | 80.0 | 7.52e-01 | 99.4% | 99.5% |
| 3227210 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.83 | 81.0 | 8.01e-01 | 100.0% | 100.0% |
| 4267075 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.83 | 80.0 | 7.52e-01 | 99.4% | 100.0% |
| 4620263 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.83 | 80.0 | 7.38e-01 | 100.0% | 97.6% |
| 4614587 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.82 | 80.0 | 7.36e-01 | 100.0% | 97.6% |
| 3253671 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 80.0 | 7.28e-01 | 100.0% | 100.0% |
| 4886707 | 375.1.1.304 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1_2 | 0.82 | 79.0 | 7.47e-01 | 99.4% | 98.5% |
| 4134159 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 78.0 | 7.51e-01 | 97.6% | 100.0% |
| 3204174 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 79.0 | 7.25e-01 | 100.0% | 97.6% |
| 4502628 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.82 | 79.0 | 7.26e-01 | 100.0% | 99.5% |
| 4531362 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 79.0 | 7.54e-01 | 99.4% | 99.5% |
| 4106902 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 79.0 | 7.57e-01 | 100.0% | 99.5% |
| 4099366 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 79.0 | 7.59e-01 | 98.8% | 100.0% |
| 4270694 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 79.0 | 7.45e-01 | 100.0% | 97.9% |
| 4886652 | 2005.1.1.91 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1_2 | 0.82 | 79.0 | 7.37e-01 | 100.0% | 99.0% |
| 3785870 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 78.0 | 7.18e-01 | 100.0% | 98.6% |
| 4954110 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 79.0 | 6.99e-01 | 100.0% | 99.1% |
| 3407519 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 78.0 | 7.34e-01 | 99.4% | 99.0% |
| 4190434 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 78.0 | 7.06e-01 | 100.0% | 99.5% |
| 3231024 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 76.0 | 7.09e-01 | 97.6% | 100.0% |
| 4943329 | 1.1.1.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1 | 0.81 | 78.0 | 7.54e-01 | 100.0% | 98.9% |
| 3489091 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 78.0 | 7.25e-01 | 100.0% | 98.5% |
| 3951371 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.80 | 77.0 | 7.17e-01 | 98.8% | 99.0% |
| 4056330 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.80 | 77.0 | 7.02e-01 | 100.0% | 99.5% |
| 4177272 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.80 | 77.0 | 7.19e-01 | 99.4% | 99.5% |
| 4928746 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.80 | 78.0 | 7.26e-01 | 100.0% | 99.5% |
| 4628376 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.80 | 77.0 | 6.82e-01 | 100.0% | 95.7% |
| 4298864 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.80 | 77.0 | 7.39e-01 | 100.0% | 99.5% |
| 5083142 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.80 | 76.0 | 6.92e-01 | 98.2% | 100.0% |
| 4052432 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.80 | 77.0 | 7.47e-01 | 100.0% | 98.4% |
| 5063344 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.80 | 76.0 | 6.89e-01 | 98.2% | 100.0% |
| 4328054 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.80 | 77.0 | 7.20e-01 | 100.0% | 99.0% |
| 5059398 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.80 | 75.0 | 6.62e-01 | 97.0% | 100.0% |
| 4171471 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.80 | 76.0 | 6.99e-01 | 99.4% | 100.0% |
| 4073746 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.80 | 77.0 | 6.65e-01 | 100.0% | 98.8% |
| 4193962 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.79 | 77.0 | 6.76e-01 | 100.0% | 99.1% |
| 4260520 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.79 | 76.0 | 6.99e-01 | 100.0% | 100.0% |
| 4200396 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.79 | 76.0 | 7.64e-01 | 98.8% | 99.4% |
| 4037167 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.79 | 76.0 | 7.06e-01 | 98.8% | 100.0% |
| 4945808 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.79 | 76.0 | 6.66e-01 | 99.4% | 99.6% |
| 5040695 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.79 | 77.0 | 6.63e-01 | 100.0% | 99.2% |
| 3193494 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.79 | 76.0 | 6.83e-01 | 100.0% | 100.0% |
| 3393740 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.79 | 63.0 | 6.88e-01 | 98.8% | 98.6% |
| 4057709 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.79 | 75.0 | 7.03e-01 | 98.8% | 100.0% |
| 4194565 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.79 | 76.0 | 7.26e-01 | 100.0% | 99.5% |
| 4139100 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.79 | 74.0 | 6.35e-01 | 98.2% | 100.0% |
| 4571530 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.79 | 76.0 | 6.72e-01 | 99.4% | 100.0% |
| 4600614 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.79 | 76.0 | 7.51e-01 | 99.4% | 99.4% |
| 4472468 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.79 | 75.0 | 7.46e-01 | 98.8% | 100.0% |
| 5055228 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.79 | 74.0 | 6.46e-01 | 98.2% | 97.1% |
| 4557119 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.78 | 75.0 | 6.99e-01 | 98.8% | 100.0% |
| 4577561 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.78 | 73.0 | 7.13e-01 | 95.9% | 100.0% |
| 4624480 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.78 | 74.0 | 7.29e-01 | 97.0% | 100.0% |
| 4626553 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.78 | 73.0 | 7.07e-01 | 96.4% | 100.0% |
| 4254291 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.78 | 75.0 | 7.17e-01 | 99.4% | 100.0% |
| 4462296 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.78 | 75.0 | 6.65e-01 | 99.4% | 100.0% |
| 4953829 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.78 | 75.0 | 6.59e-01 | 99.4% | 100.0% |
| 4353085 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.78 | 74.0 | 6.59e-01 | 100.0% | 99.6% |
| 3265524 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.76 | 71.0 | 6.61e-01 | 97.6% | 100.0% |
| 3845895 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.76 | 72.0 | 7.23e-01 | 99.4% | 98.8% |
| 3739258 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.73 | 70.0 | 6.99e-01 | 100.0% | 100.0% |
| 4166518 | 1.1.1.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › PF27692 | 0.73 | 53.0 | 6.07e-01 | 95.9% | 100.0% |
| 3507298 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.67 | 62.0 | 5.89e-01 | 97.6% | 100.0% |
D2
high
residues 642-776
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08264.20 best | Anticodon_1 | 102.2 | 3.40e-29 | 71.1% | 59.5% |
CATH (51)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gaxA02 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.93 | 84.0 | 6.78e-01 | 100.0% | 55.1% |
| 6ldkA01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.91 | 88.0 | 7.95e-01 | 100.0% | 83.1% |
| 1ileA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.91 | 88.0 | 7.61e-01 | 100.0% | 72.3% |
| 2v0cA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.91 | 75.0 | 7.04e-01 | 99.3% | 72.3% |
| 1wkbA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.90 | 74.0 | 7.88e-01 | 99.3% | 95.9% |
| 4qreA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.87 | 83.0 | 7.52e-01 | 100.0% | 90.8% |
| 1ffyA03 | 1.10.730.20 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › | 0.85 | 80.0 | 6.14e-01 | 100.0% | 47.7% |
| 1qu3A04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.85 | 80.0 | 7.72e-01 | 100.0% | 90.7% |
| 2x1lA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.84 | 79.0 | 7.21e-01 | 100.0% | 91.9% |
| 3kflA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.84 | 79.0 | 7.17e-01 | 100.0% | 88.0% |
| 1rqgA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.83 | 76.0 | 7.27e-01 | 95.6% | 94.0% |
| 5gl7A01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.82 | 75.0 | 6.94e-01 | 96.3% | 90.4% |
| 2d5bA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.80 | 76.0 | 7.06e-01 | 100.0% | 89.0% |
| 1f7uA02 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.79 | 67.0 | 7.00e-01 | 94.8% | 98.4% |
| 1qqtA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.78 | 69.0 | 6.88e-01 | 93.3% | 98.6% |
| 3fnrA01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.78 | 64.0 | 6.31e-01 | 94.1% | 81.4% |
| 1iq0A03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.78 | 63.0 | 6.76e-01 | 90.4% | 99.1% |
| 2zueA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.75 | 62.0 | 6.60e-01 | 90.4% | 99.2% |
| 2kbbA00 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.72 | 61.0 | 5.59e-01 | 90.4% | 76.4% |
| 3dyjA02 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.71 | 56.0 | 5.45e-01 | 90.4% | 74.8% |
| 1j1jA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.70 | 50.0 | 5.13e-01 | 74.1% | 75.0% |
| 2v5cA03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.70 | 52.0 | 5.28e-01 | 77.0% | 79.2% |
| 3pjaJ01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.69 | 51.0 | 5.22e-01 | 76.3% | 82.4% |
| 3n71A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.69 | 50.0 | 4.21e-01 | 80.7% | 47.4% |
| 1td6A01 | 1.20.1480.10 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1 | 0.66 | 45.0 | 5.05e-01 | 84.4% | 91.2% |
| 3fhnA04 | 1.20.58.670 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 0.64 | 41.0 | 4.22e-01 | 77.0% | 65.6% |
| 4fymF00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 46.0 | 3.95e-01 | 74.1% | 50.2% |
| 2p06B00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.63 | 37.0 | 4.45e-01 | 70.4% | 88.6% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.62 | 44.0 | 4.43e-01 | 71.9% | 78.4% |
| 3rguB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.62 | 37.0 | 4.57e-01 | 77.0% | 93.1% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.61 | 49.0 | 4.72e-01 | 83.7% | 90.7% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.61 | 37.0 | 4.53e-01 | 88.1% | 95.4% |
| 2vgxB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 36.0 | 3.59e-01 | 74.1% | 55.9% |
| 8sbeA02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.59 | 52.0 | 4.72e-01 | 97.0% | 77.5% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.59 | 36.0 | 4.13e-01 | 72.6% | 82.0% |
| 4i1eA03 | 1.25.10.30 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain | 0.58 | 43.0 | 4.27e-01 | 76.3% | 94.2% |
| 7rkxR01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 43.0 | 3.49e-01 | 78.5% | 84.6% |
| 1siqA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.57 | 47.0 | 4.51e-01 | 87.4% | 75.5% |
| 4doyA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 47.0 | 4.18e-01 | 87.4% | 77.6% |
| 3owaA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 45.0 | 4.18e-01 | 85.2% | 81.9% |
| 2yxhA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.55 | 36.0 | 3.88e-01 | 96.3% | 77.9% |
| 3o7pA01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.55 | 49.0 | 4.20e-01 | 100.0% | 64.7% |
| 2z1qB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 42.0 | 4.23e-01 | 88.9% | 79.4% |
| 2jswA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.53 | 48.0 | 4.30e-01 | 100.0% | 91.0% |
| 3llkA02 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.52 | 38.0 | 3.77e-01 | 74.8% | 91.6% |
| 2jbyA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.52 | 38.0 | 3.90e-01 | 85.2% | 79.5% |
| 1gwiA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 45.0 | 3.35e-01 | 100.0% | 70.1% |
| 2jbrA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.52 | 43.0 | 3.88e-01 | 88.9% | 75.1% |
| 2incB00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.51 | 48.0 | 3.56e-01 | 100.0% | 45.7% |
| 1cnt200 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 43.0 | 4.43e-01 | 90.4% | 95.4% |
| 2uxwA04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 36.0 | 3.68e-01 | 72.6% | 80.8% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4655910 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.96 | 90.0 | 7.47e-01 | 100.0% | 61.4% |
| 4359110 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.96 | 92.0 | 5.69e-01 | 100.0% | 21.3% |
| None | — | 0.96 | 92.0 | 5.69e-01 | 100.0% | 21.5% | |
| 4101576 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.96 | 93.0 | 7.62e-01 | 100.0% | 66.8% |
| None | — | 0.96 | 92.0 | 8.03e-01 | 100.0% | 71.9% | |
| 4218718 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.95 | 93.0 | 7.21e-01 | 100.0% | 53.6% |
| 4524747 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.95 | 91.0 | 8.08e-01 | 100.0% | 73.9% |
| 3880629 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.95 | 92.0 | 7.17e-01 | 100.0% | 54.1% |
| 3954693 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.95 | 87.0 | 5.53e-01 | 100.0% | 23.7% |
| 4948618 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.95 | 90.0 | 7.08e-01 | 97.8% | 53.8% |
| None | — | 0.95 | 92.0 | 7.82e-01 | 100.0% | 68.0% | |
| 4337376 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.95 | 92.0 | 7.89e-01 | 100.0% | 73.8% |
| 4435223 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.95 | 92.0 | 5.90e-01 | 100.0% | 27.2% |
| 4494846 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.95 | 92.0 | 7.72e-01 | 100.0% | 68.8% |
| None | — | 0.95 | 91.0 | 7.66e-01 | 99.3% | 65.4% | |
| 4928749 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.95 | 91.0 | 7.78e-01 | 100.0% | 72.5% |
| None | — | 0.95 | 92.0 | 5.80e-01 | 100.0% | 25.4% | |
| 4650334 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.94 | 90.0 | 7.67e-01 | 100.0% | 66.5% |
| 4013589 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.94 | 92.0 | 8.03e-01 | 100.0% | 74.1% |
| 3513876 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.94 | 92.0 | 5.61e-01 | 100.0% | 20.6% |
| 4298563 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.94 | 91.0 | 7.48e-01 | 100.0% | 63.2% |
| 4127901 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.94 | 91.0 | 7.60e-01 | 100.0% | 66.2% |
| None | — | 0.94 | 91.0 | 7.76e-01 | 100.0% | 69.5% | |
| None | — | 0.94 | 91.0 | 7.77e-01 | 99.3% | 69.7% | |
| None | — | 0.94 | 91.0 | 7.65e-01 | 100.0% | 68.3% | |
| 4352092 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.94 | 90.0 | 7.88e-01 | 100.0% | 72.4% |
| 3517472 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.93 | 91.0 | 7.62e-01 | 100.0% | 65.9% |
| None | — | 0.93 | 90.0 | 7.58e-01 | 100.0% | 65.4% | |
| None | — | 0.93 | 91.0 | 7.94e-01 | 100.0% | 73.0% | |
| 5049744 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.93 | 90.0 | 8.10e-01 | 100.0% | 77.1% |
| 4941164 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.93 | 88.0 | 7.44e-01 | 100.0% | 64.4% |
| 5046234 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.93 | 90.0 | 7.74e-01 | 100.0% | 71.8% |
| 4145413 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.93 | 90.0 | 7.45e-01 | 100.0% | 65.1% |
| 4932621 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.93 | 90.0 | 7.89e-01 | 100.0% | 74.1% |
| None | — | 0.93 | 88.0 | 7.64e-01 | 100.0% | 69.5% | |
| 3779620 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.93 | 88.0 | 6.77e-01 | 100.0% | 49.8% |
| None | — | 0.93 | 88.0 | 7.05e-01 | 100.0% | 56.2% | |
| 4997666 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.93 | 90.0 | 7.79e-01 | 100.0% | 72.6% |
| 4528202 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.93 | 88.0 | 7.40e-01 | 100.0% | 64.4% |
| None | — | 0.93 | 87.0 | 7.43e-01 | 100.0% | 65.5% | |
| 5036855 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.93 | 89.0 | 7.34e-01 | 100.0% | 64.5% |
| 4943176 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.93 | 88.0 | 7.78e-01 | 99.3% | 73.3% |
| None | — | 0.93 | 89.0 | 7.47e-01 | 100.0% | 69.0% | |
| 4975213 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.93 | 87.0 | 7.62e-01 | 100.0% | 70.8% |
| None | — | 0.92 | 89.0 | 7.66e-01 | 100.0% | 71.3% | |
| 4652353 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.92 | 88.0 | 7.37e-01 | 100.0% | 64.4% |
| 4456201 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.92 | 87.0 | 7.41e-01 | 99.3% | 66.0% |
| 4121305 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.92 | 85.0 | 7.38e-01 | 99.3% | 67.9% |
| 4984072 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.92 | 87.0 | 7.23e-01 | 100.0% | 61.9% |
| 4976050 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.92 | 88.0 | 6.94e-01 | 100.0% | 57.2% |
| 4291103 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.92 | 88.0 | 7.38e-01 | 100.0% | 66.2% |
| None | — | 0.92 | 88.0 | 7.38e-01 | 100.0% | 66.2% | |
| 5057073 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.91 | 88.0 | 7.37e-01 | 100.0% | 67.6% |
| None | — | 0.91 | 87.0 | 7.50e-01 | 99.3% | 72.3% | |
| 3928595 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.91 | 88.0 | 7.71e-01 | 100.0% | 73.5% |
| None | — | 0.91 | 88.0 | 7.62e-01 | 100.0% | 71.6% | |
| 4114761 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.91 | 88.0 | 7.70e-01 | 100.0% | 73.5% |
| None | — | 0.91 | 88.0 | 7.69e-01 | 100.0% | 74.1% | |
| 3393829 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.91 | 88.0 | 7.21e-01 | 100.0% | 62.3% |
| 5062582 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.90 | 87.0 | 7.04e-01 | 100.0% | 58.7% |
| 4996409 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.89 | 84.0 | 6.67e-01 | 100.0% | 53.9% |
| 3509018 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.88 | 84.0 | 6.95e-01 | 100.0% | 61.8% |
| 3785869 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.88 | 82.0 | 7.04e-01 | 100.0% | 66.5% |
| 3248452 | 140.1.1.8 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g,Anticodon_3 | 0.87 | 83.0 | 6.94e-01 | 100.0% | 74.4% |
| 4131551 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.87 | 82.0 | 5.17e-01 | 100.0% | 22.1% |
| 4886110 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.87 | 82.0 | 6.99e-01 | 100.0% | 66.3% |
| 3639704 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.87 | 82.0 | 6.69e-01 | 100.0% | 60.0% |
| 4278244 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.87 | 82.0 | 7.11e-01 | 100.0% | 69.7% |
| 3826556 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.86 | 82.0 | 6.79e-01 | 100.0% | 61.8% |
| None | — | 0.86 | 82.0 | 6.96e-01 | 100.0% | 66.3% | |
| None | — | 0.86 | 82.0 | 7.15e-01 | 100.0% | 72.1% | |
| 3765704 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.86 | 82.0 | 5.22e-01 | 100.0% | 24.5% |
| 4585741 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.86 | 82.0 | 6.95e-01 | 100.0% | 66.3% |
| None | — | 0.86 | 82.0 | 6.96e-01 | 100.0% | 66.3% | |
| None | — | 0.86 | 80.0 | 6.87e-01 | 100.0% | 66.0% | |
| 4582665 | 140.1.1.6 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1,tRNA-synt_1g | 0.86 | 82.0 | 6.29e-01 | 100.0% | 66.2% |
| None | — | 0.86 | 81.0 | 7.00e-01 | 100.0% | 68.0% | |
| 3735877 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.86 | 81.0 | 5.17e-01 | 100.0% | 24.2% |
| 4252142 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.86 | 81.0 | 6.80e-01 | 100.0% | 63.3% |
| 4250074 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.86 | 81.0 | 6.92e-01 | 100.0% | 66.3% |
| None | — | 0.86 | 81.0 | 7.05e-01 | 100.0% | 70.3% | |
| None | — | 0.86 | 81.0 | 5.10e-01 | 100.0% | 22.3% | |
| None | — | 0.86 | 81.0 | 7.11e-01 | 100.0% | 71.1% | |
| 3617523 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.86 | 79.0 | 6.44e-01 | 100.0% | 56.2% |
| None | — | 0.86 | 80.0 | 7.20e-01 | 100.0% | 74.4% | |
| None | — | 0.86 | 81.0 | 7.03e-01 | 100.0% | 69.2% | |
| 4597978 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.86 | 81.0 | 7.09e-01 | 100.0% | 71.6% |
| 4278834 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.85 | 81.0 | 6.81e-01 | 100.0% | 67.1% |
| None | — | 0.85 | 80.0 | 6.99e-01 | 100.0% | 69.7% | |
| 5058736 | 140.1.1.15 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g | 0.85 | 81.0 | 6.76e-01 | 100.0% | 72.6% |
| 4376762 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.85 | 80.0 | 6.91e-01 | 100.0% | 68.5% |
| 3170945 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.85 | 80.0 | 6.97e-01 | 100.0% | 69.7% |
| 3253674 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.85 | 80.0 | 6.72e-01 | 100.0% | 62.8% |
| 3407521 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.85 | 80.0 | 7.05e-01 | 100.0% | 72.4% |
| 4599990 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.84 | 78.0 | 6.65e-01 | 100.0% | 63.8% |
| 5065578 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.84 | 80.0 | 6.85e-01 | 100.0% | 67.5% |
| 5060868 | 140.1.1.9 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_3 | 0.83 | 79.0 | 7.26e-01 | 100.0% | 91.8% |
| None | — | 0.79 | 70.0 | 6.26e-01 | 94.8% | 72.4% | |
| 4092855 | 140.1.1.11 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 | 0.72 | 57.0 | 5.58e-01 | 92.6% | 76.4% |
| 4302386 | 140.1.1.11 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 | 0.71 | 57.0 | 5.44e-01 | 92.6% | 74.0% |
D3
medium
residues 31-149_542-561
Domain cluster:
rep: IMGVR_UViG_3300013103_001684-3300013103-Ga0164318_100098847__D3-140
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00133.29 best | tRNA-synt_1 | 151.1 | 5.70e-44 | 86.3% | 27.5% |
| PF09334.18 | tRNA-synt_1g | 26.2 | 4.60e-06 | 60.4% | 13.3% |
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gaxA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.96 | 93.0 | 6.68e-01 | 100.0% | 100.0% |
| 1ffyA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.90 | 86.0 | 5.89e-01 | 100.0% | 86.2% |
| 1wkbA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.84 | 81.0 | 5.41e-01 | 100.0% | 87.8% |
| 1pg2A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.81 | 74.0 | 5.27e-01 | 94.2% | 80.6% |
| 1rqgA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.80 | 68.0 | 6.05e-01 | 87.1% | 100.0% |
| 1iq0A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.80 | 71.0 | 5.11e-01 | 95.0% | 79.6% |
| 3fnrA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.79 | 72.0 | 5.41e-01 | 95.0% | 86.8% |
| 2csxA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.78 | 72.0 | 5.97e-01 | 95.7% | 83.0% |
| 1obhA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.78 | 71.0 | 5.29e-01 | 94.2% | 99.7% |
| 1f7uA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.73 | 66.0 | 4.85e-01 | 96.4% | 79.8% |
| 5jldA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.73 | 59.0 | 4.86e-01 | 84.9% | 100.0% |
| 1irxA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.72 | 59.0 | 5.00e-01 | 87.1% | 92.9% |
| 1li5B01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.71 | 64.0 | 5.10e-01 | 95.0% | 87.1% |
| 2q3fA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 43.0 | 3.90e-01 | 79.1% | 46.4% |
| 3sp1A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.69 | 62.0 | 4.83e-01 | 92.8% | 92.5% |
| 3k4oA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.67 | 55.0 | 4.42e-01 | 87.1% | 92.3% |
| 1z2aA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 33.0 | 3.19e-01 | 79.1% | 42.1% |
| 4axsA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.63 | 50.0 | 3.95e-01 | 84.9% | 94.8% |
| 3lloA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.62 | 33.0 | 3.40e-01 | 79.1% | 52.3% |
| 2vx7A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 51.0 | 3.76e-01 | 93.5% | 86.9% |
| 1pbgA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 48.0 | 3.32e-01 | 88.5% | 94.3% |
| 3fdxA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 41.0 | 4.34e-01 | 92.1% | 83.5% |
| 2y2wC02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 43.0 | 3.14e-01 | 79.9% | 40.4% |
| 3tnjA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 46.0 | 4.95e-01 | 93.5% | 100.0% |
| 3dcpA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.55 | 44.0 | 3.50e-01 | 84.9% | 92.8% |
| 3dx5A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.54 | 43.0 | 3.41e-01 | 83.5% | 68.9% |
| 3swhA01 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.54 | 41.0 | 3.90e-01 | 79.9% | 89.7% |
| 3or5A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 41.0 | 4.12e-01 | 92.8% | 77.9% |
| 6lr1A00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.53 | 43.0 | 2.96e-01 | 84.2% | 86.7% |
| 3drnB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 40.0 | 3.90e-01 | 89.9% | 72.0% |
| 2l5oA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 41.0 | 4.05e-01 | 92.1% | 75.3% |
| 1kqpA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 46.0 | 3.65e-01 | 92.8% | 72.3% |
| 1bxbA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.52 | 42.0 | 3.07e-01 | 85.6% | 76.0% |
| 1vm8B01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.52 | 45.0 | 3.18e-01 | 93.5% | 74.4% |
| 7xjrA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 42.0 | 3.30e-01 | 88.5% | 88.2% |
| 3s6dA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 41.0 | 3.31e-01 | 87.1% | 93.7% |
| 1j2rA00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.51 | 43.0 | 3.96e-01 | 93.5% | 84.0% |
| 1im5A00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.50 | 41.0 | 3.84e-01 | 88.5% | 87.2% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4601352 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 1.00 | 99.0 | 6.13e-01 | 100.0% | 56.6% |
| 4359110 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 1.00 | 98.0 | 6.06e-01 | 100.0% | 59.0% |
| None | — | 1.00 | 98.0 | 6.06e-01 | 100.0% | 58.7% | |
| 4180853 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 1.00 | 98.0 | 6.63e-01 | 100.0% | 82.2% |
| 4105271 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 1.00 | 98.0 | 6.50e-01 | 100.0% | 83.0% |
| 4541432 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 1.00 | 98.0 | 6.45e-01 | 100.0% | 80.2% |
| 4434548 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 1.00 | 98.0 | 6.76e-01 | 100.0% | 78.4% |
| 3195086 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 1.00 | 98.0 | 5.93e-01 | 100.0% | 51.1% |
| 4126406 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.99 | 98.0 | 6.69e-01 | 100.0% | 81.3% |
| 3737842 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.99 | 98.0 | 6.54e-01 | 100.0% | 78.8% |
| 4121492 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.99 | 92.0 | 6.60e-01 | 94.2% | 93.3% |
| None | — | 0.99 | 98.0 | 6.36e-01 | 100.0% | 82.5% | |
| 4221945 | 375.1.1.203 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1, tRNA-synt_1g | 0.99 | 91.0 | 6.46e-01 | 93.5% | 94.4% |
| 3719240 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.99 | 97.0 | 6.74e-01 | 100.0% | 79.5% |
| 4106640 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.99 | 92.0 | 6.49e-01 | 94.2% | 95.1% |
| 3920845 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.99 | 97.0 | 6.70e-01 | 100.0% | 76.3% |
| 4435223 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.99 | 97.0 | 6.21e-01 | 100.0% | 55.3% |
| 3199809 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.99 | 97.0 | 6.38e-01 | 100.0% | 83.1% |
| 3954693 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.98 | 97.0 | 6.14e-01 | 100.0% | 60.6% |
| 3867498 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.98 | 90.0 | 5.95e-01 | 92.8% | 86.4% |
| 3513876 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.98 | 96.0 | 5.90e-01 | 100.0% | 58.9% |
| None | — | 0.98 | 95.0 | 5.97e-01 | 98.6% | 60.0% | |
| 3510266 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.98 | 95.0 | 6.63e-01 | 100.0% | 92.7% |
| 3499281 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.97 | 95.0 | 6.88e-01 | 100.0% | 96.9% |
| 4107080 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.97 | 93.0 | 5.93e-01 | 97.1% | 66.7% |
| 2488197 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.97 | 82.0 | 7.58e-01 | 85.6% | 73.3% |
| 4317001 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.97 | 89.0 | 6.44e-01 | 94.2% | 93.9% |
| 4473847 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.96 | 95.0 | 6.44e-01 | 100.0% | 82.2% |
| 3940154 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.96 | 93.0 | 6.48e-01 | 100.0% | 83.7% |
| 4238908 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.95 | 93.0 | 5.94e-01 | 100.0% | 61.5% |
| 3710673 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.95 | 85.0 | 6.71e-01 | 91.4% | 88.4% |
| 4992514 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.95 | 78.0 | 7.17e-01 | 85.6% | 68.8% |
| 4133373 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.94 | 85.0 | 6.22e-01 | 92.8% | 91.4% |
| 3958199 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.93 | 84.0 | 6.27e-01 | 91.4% | 74.1% |
| 4531004 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.93 | 84.0 | 5.70e-01 | 93.5% | 92.1% |
| 4351010 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.93 | 84.0 | 5.79e-01 | 93.5% | 92.8% |
| 3794072 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.93 | 86.0 | 6.06e-01 | 95.0% | 91.5% |
| 4474715 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.93 | 89.0 | 6.17e-01 | 100.0% | 91.0% |
| 4875557 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.92 | 77.0 | 6.99e-01 | 85.6% | 68.8% |
| 3640599 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.92 | 89.0 | 6.16e-01 | 100.0% | 91.0% |
| 5049743 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.92 | 90.0 | 6.22e-01 | 100.0% | 79.5% |
| 4943175 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.92 | 89.0 | 6.30e-01 | 100.0% | 91.4% |
| 5061104 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.92 | 89.0 | 6.27e-01 | 100.0% | 92.5% |
| 4655765 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.92 | 82.0 | 5.86e-01 | 92.1% | 90.1% |
| 3798157 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.92 | 84.0 | 5.80e-01 | 95.0% | 95.4% |
| 2489192 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.92 | 61.0 | 6.43e-01 | 79.9% | 74.6% |
| 2873684 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.91 | 62.0 | 6.50e-01 | 81.3% | 75.4% |
| None | — | 0.91 | 88.0 | 5.53e-01 | 100.0% | 61.0% | |
| 4430302 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.91 | 88.0 | 6.13e-01 | 100.0% | 88.7% |
| 4215084 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.91 | 81.0 | 6.04e-01 | 92.1% | 90.5% |
| 4182113 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.91 | 88.0 | 6.32e-01 | 100.0% | 88.4% |
| 4647979 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.91 | 87.0 | 6.09e-01 | 100.0% | 87.6% |
| 3695412 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.90 | 87.0 | 6.18e-01 | 100.0% | 88.7% |
| 3752156 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.90 | 75.0 | 6.44e-01 | 85.6% | 62.0% |
| 5037525 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.90 | 80.0 | 5.85e-01 | 92.8% | 93.6% |
| 4077229 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.89 | 86.0 | 6.10e-01 | 100.0% | 90.6% |
| 4336729 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.89 | 80.0 | 5.93e-01 | 92.8% | 92.6% |
| 3928010 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.89 | 80.0 | 5.47e-01 | 92.1% | 92.0% |
| 4030453 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.86 | 83.0 | 5.12e-01 | 100.0% | 59.5% |
| 4570776 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.86 | 82.0 | 5.85e-01 | 100.0% | 92.8% |
| 5025395 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.85 | 78.0 | 5.39e-01 | 94.2% | 92.3% |
| 5032987 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.85 | 82.0 | 5.84e-01 | 100.0% | 92.7% |
| 4178455 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.85 | 78.0 | 5.92e-01 | 95.0% | 98.2% |
| 5011732 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.85 | 76.0 | 5.48e-01 | 92.1% | 96.1% |
| None | — | 0.85 | 76.0 | 5.48e-01 | 92.1% | 96.1% | |
| 4634108 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.85 | 82.0 | 5.78e-01 | 100.0% | 92.6% |
| 5027242 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.85 | 82.0 | 5.57e-01 | 100.0% | 92.8% |
| 3478473 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.85 | 77.0 | 5.38e-01 | 94.2% | 93.2% |
| 5065844 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.85 | 82.0 | 5.89e-01 | 100.0% | 93.5% |
| 4947186 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.84 | 76.0 | 5.52e-01 | 92.1% | 100.0% |
| 3475112 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.84 | 76.0 | 5.31e-01 | 93.5% | 93.2% |
| 4524152 | 375.1.1.203 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1, tRNA-synt_1g | 0.84 | 78.0 | 5.41e-01 | 95.0% | 94.5% |
| 4107595 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.84 | 81.0 | 5.57e-01 | 99.3% | 99.0% |
| 4238915 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.84 | 75.0 | 5.82e-01 | 94.2% | 98.6% |
| 4138762 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.84 | 76.0 | 5.53e-01 | 92.8% | 93.4% |
| 4984160 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.84 | 81.0 | 5.49e-01 | 100.0% | 91.9% |
| 5055227 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.84 | 81.0 | 5.64e-01 | 100.0% | 90.5% |
| 4524264 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.84 | 76.0 | 5.41e-01 | 93.5% | 93.4% |
| 5069574 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.84 | 81.0 | 5.55e-01 | 100.0% | 94.0% |
| 4119721 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.83 | 76.0 | 5.39e-01 | 93.5% | 92.6% |
| 3708924 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.83 | 69.0 | 5.70e-01 | 85.6% | 76.9% |
| 4678500 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.83 | 69.0 | 5.42e-01 | 86.3% | 100.0% |
| 3904969 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.83 | 69.0 | 5.56e-01 | 85.6% | 64.6% |
| 2599809 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.83 | 69.0 | 6.32e-01 | 85.6% | 76.6% |
| 3999090 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.83 | 77.0 | 5.41e-01 | 95.7% | 85.0% |
| 3575820 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.83 | 68.0 | 6.39e-01 | 85.6% | 73.1% |
| 3739255 | 375.1.1.203 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1, tRNA-synt_1g | 0.82 | 75.0 | 5.35e-01 | 93.5% | 93.6% |
| 5048091 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.82 | 74.0 | 5.06e-01 | 95.0% | 72.2% |
| 4173056 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.81 | 79.0 | 5.57e-01 | 100.0% | 93.9% |
| 4945527 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.81 | 73.0 | 5.44e-01 | 95.0% | 99.7% |
| 2488795 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.80 | 67.0 | 5.26e-01 | 87.1% | 91.1% |
| 4202058 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.80 | 67.0 | 5.29e-01 | 86.3% | 100.0% |
| 3188032 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.80 | 73.0 | 5.17e-01 | 95.0% | 92.3% |
| None | — | 0.80 | 66.0 | 4.85e-01 | 85.6% | 100.0% | |
| 4946097 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.79 | 68.0 | 5.26e-01 | 87.8% | 100.0% |
| 4963553 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.78 | 67.0 | 5.08e-01 | 89.2% | 99.3% |
| 4042779 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.78 | 70.0 | 5.37e-01 | 95.0% | 96.9% |
| 2486986 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.78 | 71.0 | 5.04e-01 | 95.0% | 85.7% |
| 4430167 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.77 | 70.0 | 5.57e-01 | 94.2% | 97.2% |
| 4119794 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.77 | 69.0 | 5.44e-01 | 95.7% | 97.0% |
D4
medium
residues 171-198_368-390
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00133.29 best | tRNA-synt_1 | 42.9 | 4.10e-11 | 100.0% | 9.7% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kflA02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.77 | 67.0 | 5.02e-01 | 96.1% | 76.0% |
| 1rqgA02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.72 | 63.0 | 4.51e-01 | 100.0% | 93.5% |
| 2d54A02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.68 | 58.0 | 4.58e-01 | 100.0% | 77.5% |
| 7ob9B02 | 3.90.1800.10 | Alpha Beta › Alpha-Beta Complex › DCoH-like › RNA polymerase alpha subunit dimerisation domain | 0.62 | 51.0 | 4.23e-01 | 100.0% | 91.2% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 43.0 | 4.25e-01 | 82.4% | 94.6% |
| 2kvaA01 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.54 | 38.0 | 2.85e-01 | 76.5% | 68.8% |
| 5z0uA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 33.0 | 2.82e-01 | 70.6% | 36.7% |
| 2zuvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.02e-01 | 76.5% | 39.6% |
| 1wzlA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 34.0 | 2.95e-01 | 74.5% | 42.2% |
ECOD (88)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4180853 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 1.00 | 95.0 | 5.42e-01 | 100.0% | 12.7% |
| None | — | 0.99 | 94.0 | 5.13e-01 | 100.0% | 8.1% | |
| 4541432 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.99 | 94.0 | 5.25e-01 | 100.0% | 11.0% |
| 3507731 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.99 | 84.0 | 8.93e-01 | 88.2% | 100.0% |
| 3940064 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.99 | 95.0 | 5.84e-01 | 100.0% | 28.9% |
| 4939959 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.99 | 89.0 | 5.60e-01 | 100.0% | 22.9% |
| 3798157 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.99 | 92.0 | 5.26e-01 | 100.0% | 12.7% |
| 4473847 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.99 | 94.0 | 5.35e-01 | 100.0% | 13.8% |
| 4088784 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.98 | 83.0 | 8.84e-01 | 88.2% | 100.0% |
| 4677425 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.98 | 81.0 | 7.61e-01 | 86.3% | 100.0% |
| 3999564 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.98 | 94.0 | 6.63e-01 | 100.0% | 51.5% |
| 4369642 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.98 | 90.0 | 5.12e-01 | 100.0% | 12.3% |
| 3199809 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.98 | 94.0 | 5.26e-01 | 100.0% | 15.8% |
| 4077229 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.98 | 93.0 | 5.36e-01 | 100.0% | 15.0% |
| 4992515 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.98 | 86.0 | 8.68e-01 | 92.2% | 100.0% |
| 4531004 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.98 | 91.0 | 5.14e-01 | 100.0% | 11.6% |
| 3640599 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.98 | 92.0 | 5.29e-01 | 100.0% | 13.3% |
| 4474715 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.98 | 85.0 | 4.89e-01 | 100.0% | 12.1% |
| 3867498 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.97 | 93.0 | 5.24e-01 | 100.0% | 14.5% |
| 4106640 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.97 | 90.0 | 5.26e-01 | 100.0% | 14.5% |
| 3744488 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.97 | 78.0 | 7.35e-01 | 84.3% | 100.0% |
| 4105271 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.97 | 94.0 | 5.28e-01 | 100.0% | 11.6% |
| 3710673 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.97 | 92.0 | 5.64e-01 | 100.0% | 20.8% |
| 4030453 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.97 | 90.0 | 4.91e-01 | 100.0% | 7.5% |
| 4131551 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.97 | 92.0 | 5.02e-01 | 100.0% | 8.8% |
| 4036787 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.97 | 80.0 | 8.48e-01 | 86.3% | 100.0% |
| None | — | 0.97 | 92.0 | 5.17e-01 | 100.0% | 14.3% | |
| 3249517 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.97 | 83.0 | 7.52e-01 | 90.2% | 100.0% |
| 5061104 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.97 | 91.0 | 5.27e-01 | 100.0% | 15.6% |
| 3735877 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.97 | 87.0 | 4.81e-01 | 100.0% | 8.5% |
| None | — | 0.96 | 87.0 | 4.78e-01 | 100.0% | 8.0% | |
| 4218543 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.96 | 71.0 | 7.96e-01 | 76.5% | 100.0% |
| None | — | 0.96 | 82.0 | 4.55e-01 | 100.0% | 8.7% | |
| 4457826 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.96 | 87.0 | 4.97e-01 | 100.0% | 12.0% |
| 4943173 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.96 | 80.0 | 8.53e-01 | 88.2% | 100.0% |
| 3195086 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.95 | 91.0 | 4.92e-01 | 100.0% | 9.9% |
| None | — | 0.95 | 89.0 | 4.89e-01 | 100.0% | 8.9% | |
| 4992133 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.95 | 86.0 | 5.03e-01 | 100.0% | 14.8% |
| 4234481 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.95 | 89.0 | 5.16e-01 | 100.0% | 14.6% |
| 3510266 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.95 | 89.0 | 5.15e-01 | 100.0% | 18.1% |
| 3513876 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.95 | 90.0 | 4.89e-01 | 100.0% | 13.0% |
| 4970605 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.95 | 88.0 | 5.12e-01 | 100.0% | 15.6% |
| 4150390 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.94 | 86.0 | 4.94e-01 | 100.0% | 12.3% |
| 4966286 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.93 | 87.0 | 5.00e-01 | 100.0% | 12.4% |
| 4180071 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.93 | 74.0 | 7.80e-01 | 84.3% | 100.0% |
| 5073226 | 140.1.1.13 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1 | 0.92 | 85.0 | 4.78e-01 | 100.0% | 10.1% |
| 5025243 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.92 | 85.0 | 4.97e-01 | 100.0% | 16.0% |
| 4361081 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.92 | 73.0 | 7.73e-01 | 84.3% | 100.0% |
| 4261213 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.92 | 82.0 | 4.80e-01 | 100.0% | 13.5% |
| 4965126 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.92 | 84.0 | 4.91e-01 | 100.0% | 14.4% |
| 4974610 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.92 | 84.0 | 4.84e-01 | 100.0% | 13.7% |
| 3788174 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.91 | 78.0 | 4.32e-01 | 100.0% | 8.4% |
| 4029573 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.91 | 85.0 | 4.70e-01 | 100.0% | 9.2% |
| 4609529 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.91 | 82.0 | 4.83e-01 | 100.0% | 15.1% |
| 5014982 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.91 | 82.0 | 4.70e-01 | 100.0% | 12.4% |
| 5031489 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.91 | 84.0 | 4.79e-01 | 100.0% | 12.4% |
| 4486187 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.91 | 79.0 | 4.63e-01 | 100.0% | 13.4% |
| 4437633 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.90 | 82.0 | 4.81e-01 | 100.0% | 15.0% |
| 4249943 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.90 | 74.0 | 7.77e-01 | 88.2% | 100.0% |
| 5055078 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.88 | 81.0 | 4.60e-01 | 100.0% | 11.3% |
| 4616000 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.87 | 77.0 | 4.41e-01 | 100.0% | 11.2% |
| 2488223 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.85 | 75.0 | 5.85e-01 | 100.0% | 47.2% |
| 3497002 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.85 | 77.0 | 4.55e-01 | 100.0% | 26.5% |
| 4029591 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.84 | 74.0 | 4.25e-01 | 100.0% | 11.1% |
| 4943328 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.82 | 74.0 | 4.36e-01 | 98.0% | 32.2% |
| 3598046 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.82 | 74.0 | 4.36e-01 | 98.0% | 34.5% |
| 4541761 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.81 | 75.0 | 4.48e-01 | 100.0% | 27.5% |
| 4025814 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 55.0 | 6.07e-01 | 72.5% | 97.5% |
| 4079564 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.80 | 72.0 | 4.33e-01 | 100.0% | 36.6% |
| 2487011 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 67.0 | 5.73e-01 | 100.0% | 59.0% |
| 4980850 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.79 | 70.0 | 4.20e-01 | 100.0% | 32.9% |
| 3578353 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.78 | 65.0 | 3.87e-01 | 92.2% | 24.5% |
| 3496353 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.78 | 67.0 | 4.30e-01 | 96.1% | 40.0% |
| 4217322 | 375.1.1.46 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1g | 0.78 | 65.0 | 5.87e-01 | 92.2% | 100.0% |
| 3641849 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.76 | 67.0 | 4.04e-01 | 98.0% | 35.5% |
| None | — | 0.76 | 68.0 | 4.13e-01 | 100.0% | 36.6% | |
| 4024182 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 62.0 | 5.40e-01 | 100.0% | 60.0% |
| 3520763 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 61.0 | 5.41e-01 | 90.2% | 96.0% |
| 2486986 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.75 | 63.0 | 3.71e-01 | 92.2% | 23.4% |
| 4348494 | 375.1.1.46 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1g | 0.75 | 66.0 | 4.01e-01 | 100.0% | 34.6% |
| 3172677 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.74 | 62.0 | 3.53e-01 | 96.1% | 16.0% |
| 4399974 | 375.1.1.46 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1g | 0.72 | 63.0 | 3.84e-01 | 98.0% | 27.6% |
| 4218541 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 55.0 | 5.71e-01 | 88.2% | 95.6% |
| 4321324 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 56.0 | 5.25e-01 | 88.2% | 70.8% |
| 4312482 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.68 | 61.0 | 3.66e-01 | 100.0% | 32.5% |
| 5045922 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 43.0 | 4.67e-01 | 72.5% | 92.5% |
| 4062736 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.61 | 53.0 | 3.07e-01 | 100.0% | 18.9% |
| 4948250 | 4.1.1.301 ↗ | beta barrels › SH3 › SH3 › SH3 › MJ1316 | 0.53 | 40.0 | 3.80e-01 | 86.3% | 83.1% |
D5
medium
residues 563-635
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7ob9B01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.55 | 42.0 | 3.26e-01 | 86.3% | 64.1% |
| 2iw5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 39.0 | 3.50e-01 | 75.3% | 86.2% |
| 1tbxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 3.77e-01 | 83.6% | 80.0% |
| 7br2D01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.51 | 43.0 | 3.20e-01 | 100.0% | 75.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4601352 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 1.00 | 97.0 | 5.50e-01 | 100.0% | 12.4% |
| None | — | 1.00 | 85.0 | 5.57e-01 | 87.7% | 26.1% | |
| 4218718 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.98 | 94.0 | 6.15e-01 | 100.0% | 29.2% |
| 4105271 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.94 | 65.0 | 3.86e-01 | 71.2% | 11.8% |
| 3719240 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.94 | 65.0 | 3.95e-01 | 71.2% | 14.1% |
| 3940154 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.92 | 65.0 | 3.95e-01 | 100.0% | 14.1% |
| 3477653 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.92 | 87.0 | 5.65e-01 | 100.0% | 26.5% |
| 3513876 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.91 | 86.0 | 4.85e-01 | 100.0% | 11.1% |
| 3880629 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.91 | 85.0 | 5.65e-01 | 100.0% | 28.6% |
| 3920845 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.91 | 64.0 | 3.88e-01 | 72.6% | 13.9% |
| 3744364 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.90 | 85.0 | 5.61e-01 | 100.0% | 28.6% |
| 3195086 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.90 | 83.0 | 4.72e-01 | 100.0% | 10.7% |
| 3779620 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.90 | 84.0 | 5.53e-01 | 100.0% | 27.5% |
| 3249514 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.90 | 84.0 | 5.47e-01 | 100.0% | 26.5% |
| 3618230 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.89 | 84.0 | 5.60e-01 | 100.0% | 29.8% |
| None | — | 0.87 | 67.0 | 4.57e-01 | 80.8% | 25.1% |
D6
medium
residues 777-828
Domain cluster:
representative
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4247276 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.74 | 52.0 | 4.05e-01 | 73.1% | 36.2% |
| 3968025 | 2486.1.1.17 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N | 0.67 | 46.0 | 2.95e-01 | 71.2% | 24.9% |
| 2845167 | 3544.1.1.1 ↗ | extended segments › Small envelope protein M › Small envelope protein M › Small envelope protein M › Flavi_M | 0.57 | 39.0 | 3.57e-01 | 73.1% | 69.4% |
| 1866767 | 2486.1.1.3 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans | 0.57 | 40.0 | 2.60e-01 | 76.9% | 93.0% |
| 3327381 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.50 | 41.0 | 2.30e-01 | 96.2% | 28.5% |
| 3890040 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.50 | 41.0 | 2.99e-01 | 90.4% | 40.7% |
D7
medium
residues 829-958
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10458.15 best | Val_tRNA-synt_C | 75.4 | 4.90e-21 | 50.8% | 93.9% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.90 | 43.0 | 6.43e-01 | 98.5% | 100.0% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.82 | 46.0 | 6.02e-01 | 77.7% | 96.1% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 51.0 | 6.03e-01 | 79.2% | 90.2% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.78 | 52.0 | 6.21e-01 | 91.5% | 97.8% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.70 | 46.0 | 5.50e-01 | 94.6% | 100.0% |
| 1rfyB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.69 | 44.0 | 5.18e-01 | 70.8% | 94.3% |
| 3whjA00 | 6.10.140.1710 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 42.0 | 4.49e-01 | 79.2% | 71.2% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.66 | 44.0 | 4.31e-01 | 71.5% | 62.2% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.60 | 46.0 | 4.21e-01 | 78.5% | 90.1% |
| 6vq6G02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.58 | 51.0 | 4.46e-01 | 95.4% | 65.2% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.58 | 50.0 | 4.44e-01 | 95.4% | 65.6% |
| 1a36A04 | 1.10.132.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.56 | 39.0 | 3.58e-01 | 94.6% | 54.3% |
| 3d6iA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 31.0 | 3.37e-01 | 86.9% | 65.5% |
| 2v0xA01 | 1.10.287.3160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 48.0 | 4.38e-01 | 94.6% | 83.9% |
| 2h8lA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 32.0 | 3.37e-01 | 84.6% | 64.6% |
| 3kosA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 33.0 | 3.63e-01 | 98.5% | 81.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4459302 | 3826.1.1.26 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › RRP36 | 0.78 | 47.0 | 4.57e-01 | 80.8% | 55.7% |
| 3927012 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.76 | 53.0 | 5.18e-01 | 70.8% | 89.3% |
| 3266175 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.74 | 49.0 | 5.24e-01 | 99.2% | 75.7% |
| 4018370 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.62 | 49.0 | 4.92e-01 | 91.5% | 80.8% |
| 5083475 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.60 | 54.0 | 4.22e-01 | 100.0% | 77.5% |
| 3916044 | 3684.1.1.35 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › JMY | 0.55 | 42.0 | 3.89e-01 | 80.0% | 76.9% |
| 3385727 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.53 | 51.0 | 3.86e-01 | 100.0% | 69.6% |