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CAKLQH020000003.1__CAH1075730.1__SAMEA5780036_00704__00145
Bact-VirCAKLQH020000003.1__CAH1075730.1__SAMEA5780036_00704__00145
Identity
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-111
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01245.27 best | Ribosomal_L19 | 158.5 | 7.20e-47 | 100.0% | 88.3% |
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 79.0 | 7.08e-01 | 100.0% | 82.6% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 48.0 | 5.19e-01 | 73.7% | 79.5% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 47.0 | 5.39e-01 | 75.8% | 97.2% |
| 2f5tX02 | 2.30.30.690 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 51.0 | 5.33e-01 | 77.8% | 93.3% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 45.0 | 3.89e-01 | 73.7% | 47.0% |
| 3agjF01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.64 | 49.0 | 4.47e-01 | 79.8% | 72.4% |
| 1vwxT01 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.63 | 46.0 | 4.66e-01 | 75.8% | 76.3% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.63 | 45.0 | 4.45e-01 | 79.8% | 71.2% |
| 4c92C00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 43.0 | 4.76e-01 | 73.7% | 97.5% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 42.0 | 4.66e-01 | 70.7% | 92.1% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 39.0 | 3.84e-01 | 73.7% | 61.0% |
| 3g1jA00 | 2.30.30.350 | Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. | 0.60 | 42.0 | 4.42e-01 | 72.7% | 88.9% |
| 5j3tA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 41.0 | 3.82e-01 | 70.7% | 69.0% |
| 2l33A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 36.0 | 3.77e-01 | 72.7% | 69.2% |
| 1lvbA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 35.0 | 3.47e-01 | 73.7% | 57.4% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 38.0 | 3.95e-01 | 72.7% | 92.6% |
| 4ikcA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 38.0 | 2.73e-01 | 71.7% | 34.3% |
| 4ic5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 37.0 | 3.69e-01 | 73.7% | 67.3% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.54 | 40.0 | 3.63e-01 | 77.8% | 82.0% |
| 2ra6C00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 44.0 | 3.88e-01 | 88.9% | 97.9% |
| 6r3wA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 40.0 | 3.42e-01 | 79.8% | 97.5% |
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.53 | 44.0 | 3.53e-01 | 96.0% | 98.6% |
| 2gfoA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 38.0 | 2.66e-01 | 76.8% | 53.4% |
| 1ohfA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.52 | 39.0 | 3.52e-01 | 79.8% | 87.2% |
| 1vwxS02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 36.0 | 4.07e-01 | 86.9% | 94.7% |
| 3e0jB00 | 3.90.1030.20 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain | 0.51 | 36.0 | 3.19e-01 | 88.9% | 50.3% |
| 1olrA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.51 | 35.0 | 2.71e-01 | 70.7% | 63.7% |
| 2z13A00 | 2.30.29.170 | Mainly Beta › Roll › PH-domain like › | 0.51 | 36.0 | 3.45e-01 | 73.7% | 81.2% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4668960 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.99 | 96.0 | 9.20e-01 | 100.0% | 90.9% |
| 4063634 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.98 | 95.0 | 8.64e-01 | 100.0% | 83.1% |
| 4400596 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.98 | 95.0 | 7.78e-01 | 100.0% | 65.0% |
| 4674170 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.97 | 94.0 | 8.64e-01 | 100.0% | 83.3% |
| 3821287 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.94 | 85.0 | 7.37e-01 | 93.9% | 69.3% |
| 4607738 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.94 | 90.0 | 8.66e-01 | 100.0% | 90.9% |
| 4272564 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.91 | 88.0 | 8.49e-01 | 100.0% | 94.4% |
| 4024274 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.91 | 73.0 | 7.16e-01 | 82.8% | 83.8% |
| 3575581 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.90 | 86.0 | 7.04e-01 | 100.0% | 78.8% |
| 2755606 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.90 | 86.0 | 6.30e-01 | 100.0% | 56.1% |
| 3738626 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.90 | 86.0 | 7.36e-01 | 100.0% | 80.0% |
| 3477401 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.89 | 85.0 | 6.14e-01 | 100.0% | 52.7% |
| 3184235 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.86 | 82.0 | 7.02e-01 | 100.0% | 74.5% |
| 3730011 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.85 | 82.0 | 7.11e-01 | 100.0% | 75.7% |
| 3786396 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.84 | 80.0 | 7.20e-01 | 100.0% | 80.8% |
| 3167531 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.84 | 80.0 | 7.05e-01 | 100.0% | 80.7% |
| 5024227 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 51.0 | 6.31e-01 | 71.7% | 100.0% |
| 3232582 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 65.0 | 6.62e-01 | 91.9% | 90.5% |
| 3739064 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 48.0 | 5.79e-01 | 72.7% | 100.0% |
| 3876680 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.74 | 47.0 | 4.69e-01 | 71.7% | 63.0% |
| 3901117 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.74 | 46.0 | 3.76e-01 | 70.7% | 35.0% |
| 4283343 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.73 | 53.0 | 5.83e-01 | 74.7% | 96.2% |
| 3879653 | 4.1.1.223 ↗ | beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st | 0.73 | 46.0 | 5.46e-01 | 77.8% | 91.4% |
| 5010832 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.72 | 53.0 | 5.60e-01 | 76.8% | 95.5% |
| 4209798 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.72 | 52.0 | 5.59e-01 | 74.7% | 91.8% |
| 3185321 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.71 | 50.0 | 5.63e-01 | 74.7% | 96.0% |
| 3719860 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 62.0 | 5.95e-01 | 96.0% | 90.4% |
| 3188712 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.71 | 50.0 | 5.05e-01 | 73.7% | 88.0% |
| 165654 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.71 | 48.0 | 5.40e-01 | 74.7% | 93.2% |
| 4964141 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.70 | 51.0 | 5.40e-01 | 76.8% | 93.3% |
| 4358168 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.69 | 53.0 | 5.10e-01 | 79.8% | 79.1% |
| 3812766 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.68 | 46.0 | 5.30e-01 | 70.7% | 97.1% |
| 4251101 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 50.0 | 5.35e-01 | 75.8% | 89.4% |
| 3942912 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.68 | 52.0 | 5.59e-01 | 87.9% | 95.3% |
| 3978997 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.66 | 56.0 | 5.70e-01 | 93.9% | 94.7% |
| 3519122 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.65 | 53.0 | 5.49e-01 | 90.9% | 96.7% |
| 4022025 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.65 | 47.0 | 4.09e-01 | 75.8% | 51.0% |
| 3972550 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.64 | 52.0 | 5.25e-01 | 92.9% | 87.0% |
| 3283097 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.64 | 55.0 | 5.31e-01 | 92.9% | 84.5% |
| 4542692 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 46.0 | 4.90e-01 | 74.7% | 92.9% |
| 3645842 | 4.1.1.162 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF502 | 0.62 | 44.0 | 4.80e-01 | 84.8% | 91.3% |
| 3934278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 43.0 | 4.15e-01 | 73.7% | 67.0% |
| 3515762 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.61 | 42.0 | 4.75e-01 | 90.9% | 94.7% |
| 3836393 | 9.2.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Vac_ImportDeg | 0.60 | 45.0 | 3.59e-01 | 77.8% | 93.4% |
| 3924619 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 46.0 | 4.30e-01 | 81.8% | 74.2% |
| 4055974 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.59 | 45.0 | 4.15e-01 | 79.8% | 80.0% |
| 3842363 | 1.1.5.76 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT | 0.59 | 45.0 | 4.34e-01 | 80.8% | 84.5% |
| 3770803 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.58 | 44.0 | 4.31e-01 | 80.8% | 84.5% |
| 3320319 | 4.1.1.152 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF1262 | 0.58 | 43.0 | 3.92e-01 | 80.8% | 61.4% |
| 3459099 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.57 | 50.0 | 4.96e-01 | 93.9% | 89.5% |
| 3504380 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.56 | 42.0 | 3.62e-01 | 78.8% | 61.9% |
| 5023972 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 38.0 | 4.11e-01 | 80.8% | 83.5% |
| 5065295 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.55 | 40.0 | 3.51e-01 | 77.8% | 98.1% |
| 4941649 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 39.0 | 3.99e-01 | 74.7% | 87.4% |
| 3994249 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.53 | 38.0 | 3.28e-01 | 74.7% | 52.9% |
| 3972645 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.53 | 40.0 | 3.65e-01 | 81.8% | 100.0% |
| 3220497 | 1.1.17.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 | 0.52 | 39.0 | 3.07e-01 | 80.8% | 38.2% |
| 3180837 | 1.1.5.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_oxase_2 | 0.52 | 43.0 | 3.25e-01 | 89.9% | 71.2% |
| 4343392 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 38.0 | 3.75e-01 | 78.8% | 95.5% |
| 3236998 | 4004.1.1.0 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like | 0.52 | 41.0 | 3.31e-01 | 85.9% | 79.5% |
| 3902169 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 39.0 | 3.67e-01 | 81.8% | 89.6% |
| 3464137 | 4.1.1.152 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF1262 | 0.51 | 43.0 | 3.70e-01 | 93.9% | 80.6% |
| 3632407 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 38.0 | 3.63e-01 | 80.8% | 86.3% |
| 3569563 | 1.1.5.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyrid_oxidase_2 | 0.50 | 40.0 | 3.35e-01 | 86.9% | 68.7% |