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CAKLQH020000005.1__CAH1078922.1__SAMEA5780036_01163__00145
Bact-VirCAKLQH020000005.1__CAH1078922.1__SAMEA5780036_01163__00145
Identity
- Kingdom:
- phage
Quality
79.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-52
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04760.22 best | IF2_N | 29.2 | 8.70e-07 | 100.0% | 88.7% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5c8qB02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.75 | 53.0 | 5.49e-01 | 98.0% | 80.4% |
| 3keoA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 59.0 | 5.25e-01 | 91.8% | 59.7% |
| 7zhgO01 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.69 | 57.0 | 5.34e-01 | 100.0% | 78.8% |
| 8d8lM01 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.68 | 56.0 | 4.89e-01 | 100.0% | 63.0% |
| 6ifsB02 | 1.10.8.100 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain | 0.66 | 54.0 | 4.93e-01 | 100.0% | 83.1% |
| 3eeeA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.63 | 54.0 | 3.67e-01 | 100.0% | 29.8% |
| 1zq9A02 | 1.10.8.480 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 50.0 | 4.09e-01 | 100.0% | 80.6% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.59 | 35.0 | 2.84e-01 | 91.8% | 31.5% |
| 1vw4801 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.57 | 41.0 | 3.67e-01 | 77.6% | 50.7% |
| 2vixA02 | 1.10.150.630 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.57 | 45.0 | 3.65e-01 | 85.7% | 65.2% |
| 3eb2A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 40.0 | 2.50e-01 | 77.6% | 20.8% |
| 3bzcA04 | 1.10.150.310 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tex RuvX-like domain-like | 0.56 | 43.0 | 3.23e-01 | 100.0% | 31.8% |
| 2crwA00 | 1.10.220.150 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Arf GTPase activating protein | 0.55 | 46.0 | 3.32e-01 | 95.9% | 61.1% |
| 4aihF00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 37.0 | 3.03e-01 | 77.6% | 67.0% |
| 4h33A00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 40.0 | 3.35e-01 | 85.7% | 54.9% |
| 2qbyB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 2.64e-01 | 77.6% | 40.6% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.52 | 41.0 | 3.13e-01 | 85.7% | 68.1% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.51 | 40.0 | 3.56e-01 | 98.0% | 67.1% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4557606 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 1.00 | 96.0 | 7.48e-01 | 100.0% | 54.4% |
| 4251581 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.98 | 93.0 | 8.24e-01 | 100.0% | 75.4% |
| 4886263 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.97 | 91.0 | 8.73e-01 | 100.0% | 89.1% |
| 4391818 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.97 | 91.0 | 7.33e-01 | 100.0% | 57.6% |
| 4288189 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.95 | 89.0 | 7.98e-01 | 100.0% | 75.4% |
| 4046076 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.95 | 89.0 | 6.71e-01 | 100.0% | 46.7% |
| 3514709 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.95 | 87.0 | 8.35e-01 | 100.0% | 87.3% |
| 4286215 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.95 | 89.0 | 7.93e-01 | 100.0% | 75.4% |
| 4564509 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.94 | 87.0 | 8.07e-01 | 100.0% | 83.3% |
| 4600365 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.94 | 85.0 | 6.91e-01 | 100.0% | 56.5% |
| 4100484 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.93 | 86.0 | 8.21e-01 | 100.0% | 90.9% |
| 4218351 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.92 | 83.0 | 7.97e-01 | 100.0% | 87.3% |
| 4230774 | 101.1.9.117 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_assoc | 0.92 | 83.0 | 6.49e-01 | 100.0% | 50.5% |
| 4355235 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.92 | 81.0 | 8.10e-01 | 95.9% | 94.0% |
| 4228237 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.92 | 82.0 | 8.23e-01 | 98.0% | 96.0% |
| 4433058 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.91 | 77.0 | 8.05e-01 | 95.9% | 100.0% |
| 4389062 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.90 | 82.0 | 7.64e-01 | 100.0% | 85.0% |
| 4188102 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.90 | 81.0 | 7.16e-01 | 100.0% | 71.4% |
| 4408493 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.90 | 79.0 | 7.87e-01 | 98.0% | 94.0% |
| 4057369 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.89 | 81.0 | 5.70e-01 | 100.0% | 35.0% |
| 3290494 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.89 | 77.0 | 7.70e-01 | 95.9% | 92.0% |
| 4107179 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.88 | 77.0 | 6.95e-01 | 98.0% | 72.3% |
| 4158216 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.88 | 80.0 | 7.45e-01 | 100.0% | 81.7% |
| 3387184 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.88 | 80.0 | 4.77e-01 | 100.0% | 16.2% |
| 4614755 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.88 | 77.0 | 6.59e-01 | 98.0% | 62.7% |
| 4210562 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.88 | 80.0 | 7.41e-01 | 100.0% | 83.3% |
| 4519321 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.88 | 80.0 | 7.18e-01 | 100.0% | 76.9% |
| 4561443 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.87 | 78.0 | 7.24e-01 | 98.0% | 81.7% |
| 4551162 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.87 | 75.0 | 6.60e-01 | 98.0% | 65.7% |
| 4456842 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.87 | 79.0 | 7.38e-01 | 100.0% | 83.3% |
| 4097210 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.87 | 76.0 | 7.34e-01 | 98.0% | 85.5% |
| 4679320 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.87 | 74.0 | 7.43e-01 | 95.9% | 92.0% |
| 4460243 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.86 | 78.0 | 7.54e-01 | 100.0% | 90.9% |
| 4051544 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.86 | 76.0 | 7.04e-01 | 98.0% | 78.3% |
| 4375269 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.86 | 73.0 | 6.64e-01 | 98.0% | 70.8% |
| 4401871 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.86 | 75.0 | 7.20e-01 | 98.0% | 85.5% |
| 4630854 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.86 | 75.0 | 7.49e-01 | 98.0% | 94.0% |
| 4330114 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.85 | 76.0 | 6.85e-01 | 98.0% | 75.4% |
| 4447894 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.85 | 73.0 | 7.08e-01 | 98.0% | 85.5% |
| 4352200 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.85 | 73.0 | 6.50e-01 | 98.0% | 67.1% |
| 4100614 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.85 | 77.0 | 7.36e-01 | 98.0% | 89.1% |
| 4142235 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.85 | 74.0 | 5.79e-01 | 98.0% | 47.0% |
| 4292036 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.85 | 74.0 | 6.92e-01 | 98.0% | 80.0% |
| 4183912 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.85 | 73.0 | 6.31e-01 | 98.0% | 62.7% |
| 4657200 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.85 | 73.0 | 4.17e-01 | 98.0% | 10.0% |
| 4278221 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.85 | 73.0 | 6.65e-01 | 98.0% | 72.3% |
| 4553393 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.84 | 72.0 | 6.97e-01 | 98.0% | 83.6% |
| 4322705 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.84 | 72.0 | 6.39e-01 | 98.0% | 67.1% |
| 4127906 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.84 | 73.0 | 7.08e-01 | 98.0% | 85.5% |
| 4472807 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.84 | 76.0 | 6.31e-01 | 98.0% | 61.3% |
| 4341483 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.83 | 71.0 | 6.65e-01 | 98.0% | 78.3% |
| 4670849 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.83 | 70.0 | 5.72e-01 | 98.0% | 51.1% |
| 3743250 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.83 | 72.0 | 6.90e-01 | 98.0% | 85.5% |
| 3366705 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.82 | 72.0 | 6.52e-01 | 98.0% | 73.8% |
| 3268224 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.82 | 69.0 | 6.69e-01 | 98.0% | 85.5% |
| 3954617 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.82 | 74.0 | 7.15e-01 | 100.0% | 89.1% |
| None | — | 0.82 | 72.0 | 4.50e-01 | 100.0% | 19.2% | |
| 4130472 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.82 | 72.0 | 6.54e-01 | 100.0% | 73.8% |
| 4221363 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.82 | 70.0 | 6.22e-01 | 98.0% | 67.1% |
| 4015540 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.81 | 72.0 | 7.23e-01 | 98.0% | 96.0% |
| 3579672 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.81 | 71.0 | 6.87e-01 | 98.0% | 87.3% |
| 3667742 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.81 | 69.0 | 4.36e-01 | 98.0% | 19.6% |
| 3325524 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.78 | 65.0 | 6.28e-01 | 98.0% | 83.6% |
| 3622395 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.78 | 67.0 | 6.12e-01 | 98.0% | 73.8% |
| 3664931 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.77 | 64.0 | 6.39e-01 | 98.0% | 92.0% |
| 3164063 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.75 | 64.0 | 5.76e-01 | 98.0% | 80.0% |
| 282935 | 3601.1.1.1 ↗ | alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Ad_Cy_reg | 0.74 | 66.0 | 4.33e-01 | 100.0% | 33.2% |
| 3595402 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.72 | 55.0 | 5.72e-01 | 98.0% | 93.3% |
| 4553544 | 3601.1.1.1 ↗ | alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Ad_Cy_reg | 0.72 | 63.0 | 4.20e-01 | 100.0% | 31.8% |
| 4275779 | 102.2.1.1 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › RrnaAD | 0.71 | 61.0 | 5.50e-01 | 100.0% | 78.6% |
| 3959614 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.71 | 59.0 | 5.00e-01 | 100.0% | 55.6% |
| 4174315 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.70 | 58.0 | 5.21e-01 | 100.0% | 75.7% |
| 3284690 | 3601.1.1.0 ↗ | alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain | 0.68 | 60.0 | 4.24e-01 | 100.0% | 46.0% |
| 4648653 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.66 | 54.0 | 4.86e-01 | 100.0% | 73.0% |
| 3971201 | 873.1.1.7 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › Arabinose_bd | 0.65 | 56.0 | 3.75e-01 | 100.0% | 27.0% |
| 4495706 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.65 | 53.0 | 4.87e-01 | 100.0% | 78.6% |
| 5079455 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.65 | 53.0 | 4.67e-01 | 100.0% | 61.3% |
| 3286211 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.61 | 51.0 | 4.90e-01 | 100.0% | 90.0% |
| 3449811 | 101.1.10.38 ↗ | alpha arrays › HTH › HTH › Cyclin-like › DUF247 | 0.59 | 48.0 | 3.72e-01 | 98.0% | 95.2% |
| 4648382 | 2498.1.1.22 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY | 0.54 | 45.0 | 3.26e-01 | 95.9% | 51.7% |
| 4248250 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.52 | 41.0 | 2.87e-01 | 93.9% | 61.1% |
| 4026182 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 38.0 | 2.73e-01 | 89.8% | 83.2% |
D2
high
residues 318-379
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04760.22 best | IF2_N | 59.5 | 3.10e-16 | 82.3% | 88.7% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b43A01 | 1.10.10.2480 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.91 | 73.0 | 7.05e-01 | 83.9% | 76.5% |
| 2dt5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 56.0 | 5.28e-01 | 82.3% | 78.1% |
| 3keoA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 55.0 | 5.24e-01 | 82.3% | 79.2% |
| 2zkmX01 | 2.30.29.240 | Mainly Beta › Roll › PH-domain like › | 0.70 | 54.0 | 3.81e-01 | 87.1% | 31.1% |
| 5yc9B01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.69 | 49.0 | 4.27e-01 | 77.4% | 48.5% |
| 3hh0A01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.69 | 51.0 | 4.91e-01 | 80.6% | 76.4% |
| 1r8eA02 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.65 | 47.0 | 4.57e-01 | 80.6% | 76.7% |
| 4r30A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.62 | 44.0 | 3.14e-01 | 100.0% | 25.7% |
| 6ln3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 44.0 | 3.07e-01 | 75.8% | 51.0% |
| 3guxA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.62 | 49.0 | 3.31e-01 | 88.7% | 64.8% |
| 3umgA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 44.0 | 4.25e-01 | 77.4% | 84.5% |
| 3tduA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.60 | 47.0 | 4.29e-01 | 90.3% | 77.8% |
| 4evwA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.55 | 46.0 | 3.19e-01 | 100.0% | 39.1% |
| 1o9gA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 38.0 | 2.65e-01 | 72.6% | 76.2% |
| 2afsA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.54 | 42.0 | 2.70e-01 | 87.1% | 57.0% |
| 1f14A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 42.0 | 2.97e-01 | 85.5% | 93.4% |
| 2fbmA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.53 | 42.0 | 3.15e-01 | 98.4% | 42.1% |
| 1repC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 3.44e-01 | 91.9% | 100.0% |
| 1m32A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 41.0 | 2.88e-01 | 95.2% | 81.3% |
| 3wtbC00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 42.0 | 2.86e-01 | 90.3% | 93.4% |
| 3majA01 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 42.0 | 2.74e-01 | 93.5% | 20.5% |
| 3oesA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 40.0 | 3.03e-01 | 87.1% | 83.4% |
| 6wm6A01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.51 | 42.0 | 2.90e-01 | 93.5% | 95.2% |
| 2nraC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 40.0 | 3.14e-01 | 91.9% | 97.3% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4097210 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 1.00 | 86.0 | 9.15e-01 | 88.7% | 100.0% |
| 4051544 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 1.00 | 93.0 | 9.54e-01 | 96.8% | 100.0% |
| 4657200 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 1.00 | 87.0 | 4.97e-01 | 90.3% | 11.9% |
| 3290494 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.98 | 75.0 | 8.39e-01 | 79.0% | 100.0% |
| 4271625 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.98 | 91.0 | 9.32e-01 | 96.8% | 100.0% |
| 4355236 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.98 | 69.0 | 8.11e-01 | 72.6% | 100.0% |
| 4315777 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.98 | 91.0 | 6.66e-01 | 96.8% | 42.9% |
| 4553393 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.98 | 83.0 | 8.87e-01 | 88.7% | 100.0% |
| 4127906 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.98 | 82.0 | 8.74e-01 | 87.1% | 100.0% |
| 4057369 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.98 | 90.0 | 6.63e-01 | 96.8% | 42.9% |
| 4221363 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.97 | 91.0 | 8.67e-01 | 98.4% | 87.1% |
| 4433058 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.96 | 68.0 | 7.92e-01 | 72.6% | 100.0% |
| 3667742 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.96 | 92.0 | 5.87e-01 | 100.0% | 26.2% |
| 4473430 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.96 | 92.0 | 8.27e-01 | 100.0% | 77.5% |
| 3366705 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.96 | 86.0 | 8.44e-01 | 93.5% | 90.8% |
| 4039362 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.96 | 88.0 | 9.02e-01 | 96.8% | 100.0% |
| 4375269 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.95 | 87.0 | 8.62e-01 | 96.8% | 92.3% |
| 4210562 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.95 | 71.0 | 7.25e-01 | 77.4% | 81.7% |
| 4329911 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.95 | 86.0 | 8.73e-01 | 95.2% | 98.3% |
| 4352200 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.95 | 90.0 | 8.56e-01 | 100.0% | 88.6% |
| 4551162 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.95 | 87.0 | 8.30e-01 | 96.8% | 87.1% |
| 4679320 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.94 | 69.0 | 7.64e-01 | 75.8% | 96.0% |
| 4158216 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.94 | 72.0 | 7.34e-01 | 79.0% | 83.3% |
| 4271700 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.94 | 89.0 | 8.80e-01 | 100.0% | 96.9% |
| 3387184 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.94 | 88.0 | 5.41e-01 | 100.0% | 19.7% |
| 4630854 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.94 | 71.0 | 7.94e-01 | 79.0% | 100.0% |
| 4614755 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.94 | 88.0 | 8.21e-01 | 100.0% | 82.7% |
| None | — | 0.94 | 79.0 | 5.06e-01 | 88.7% | 23.2% | |
| 4278221 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.94 | 84.0 | 8.27e-01 | 93.5% | 89.2% |
| 4322705 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.94 | 88.0 | 8.43e-01 | 100.0% | 88.6% |
| 4408493 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.94 | 72.0 | 8.03e-01 | 82.3% | 100.0% |
| 4456842 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.93 | 73.0 | 7.49e-01 | 82.3% | 86.7% |
| 4549467 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.93 | 84.0 | 8.54e-01 | 96.8% | 100.0% |
| 4389062 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.92 | 73.0 | 7.43e-01 | 82.3% | 86.7% |
| 4130472 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.92 | 85.0 | 8.36e-01 | 98.4% | 95.4% |
| 3476358 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.92 | 79.0 | 8.02e-01 | 90.3% | 100.0% |
| 4401871 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.92 | 72.0 | 7.68e-01 | 82.3% | 98.2% |
| 4071635 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.92 | 81.0 | 7.94e-01 | 93.5% | 89.2% |
| 2892669 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.92 | 85.0 | 7.47e-01 | 100.0% | 70.5% |
| 4670849 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.91 | 72.0 | 6.20e-01 | 82.3% | 56.7% |
| 3395038 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.91 | 82.0 | 8.10e-01 | 96.8% | 96.9% |
| 4447894 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.91 | 76.0 | 7.99e-01 | 88.7% | 100.0% |
| 4292036 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.91 | 80.0 | 8.18e-01 | 95.2% | 100.0% |
| 4341483 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.91 | 82.0 | 8.35e-01 | 98.4% | 100.0% |
| 3579672 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.91 | 75.0 | 7.91e-01 | 87.1% | 100.0% |
| 3729235 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.91 | 80.0 | 8.19e-01 | 95.2% | 100.0% |
| 3622395 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.91 | 84.0 | 8.29e-01 | 100.0% | 96.9% |
| 4539352 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.90 | 69.0 | 7.62e-01 | 80.6% | 100.0% |
| 4519321 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.89 | 70.0 | 6.87e-01 | 82.3% | 80.0% |
| 4107179 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.89 | 78.0 | 7.70e-01 | 96.8% | 90.8% |
| 4561443 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.89 | 69.0 | 7.07e-01 | 82.3% | 86.7% |
| 4330114 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.89 | 71.0 | 6.98e-01 | 83.9% | 80.0% |
| None | — | 0.88 | 78.0 | 5.02e-01 | 96.8% | 22.6% | |
| 3930280 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.88 | 79.0 | 7.83e-01 | 96.8% | 100.0% |
| 3849756 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.88 | 80.0 | 7.52e-01 | 100.0% | 86.7% |
| 4390858 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.88 | 66.0 | 7.22e-01 | 79.0% | 100.0% |
| 4230774 | 101.1.9.117 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_assoc | 0.88 | 67.0 | 5.70e-01 | 80.6% | 52.6% |
| 4666406 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.87 | 78.0 | 7.66e-01 | 95.2% | 90.8% |
| 4218351 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.87 | 66.0 | 7.00e-01 | 80.6% | 90.9% |
| 4640858 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.87 | 67.0 | 6.26e-01 | 82.3% | 72.0% |
| 4378047 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.86 | 66.0 | 6.99e-01 | 80.6% | 90.9% |
| 4460243 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.85 | 66.0 | 6.95e-01 | 82.3% | 94.5% |
| 3268224 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.85 | 70.0 | 7.35e-01 | 90.3% | 100.0% |
| 4649460 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.84 | 76.0 | 7.34e-01 | 100.0% | 88.6% |
| 3514709 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.84 | 63.0 | 6.73e-01 | 79.0% | 90.9% |
| 3325524 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.84 | 69.0 | 7.32e-01 | 88.7% | 100.0% |
| 3664931 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.84 | 64.0 | 7.05e-01 | 82.3% | 100.0% |
| 4600365 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.83 | 62.0 | 5.56e-01 | 79.0% | 58.8% |
| 4326219 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.83 | 66.0 | 6.97e-01 | 85.5% | 98.2% |
| 4087721 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.74 | 55.0 | 5.41e-01 | 79.0% | 76.9% |
| 3614894 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.73 | 58.0 | 4.24e-01 | 88.7% | 42.4% |
| 3504478 | 101.1.2.81 ↗ | alpha arrays › HTH › HTH › winged helix domain › Put_DNA-bind_N | 0.72 | 57.0 | 5.08e-01 | 83.9% | 70.6% |
| 4667980 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 55.0 | 5.20e-01 | 83.9% | 80.0% |
| 4310740 | 101.1.2.81 ↗ | alpha arrays › HTH › HTH › winged helix domain › Put_DNA-bind_N | 0.71 | 55.0 | 5.05e-01 | 83.9% | 75.0% |
| 3521250 | 108.1.1.45 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › PLCB1-4-like_EFh | 0.69 | 53.0 | 4.96e-01 | 87.1% | 80.0% |
| 3578574 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 50.0 | 4.34e-01 | 77.4% | 61.1% |
| 3712067 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.65 | 50.0 | 4.52e-01 | 88.7% | 80.0% |
| 3432132 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.64 | 51.0 | 3.81e-01 | 90.3% | 94.5% |
| 5013296 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.60 | 49.0 | 3.26e-01 | 88.7% | 27.5% |
| 3706008 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.56 | 45.0 | 4.16e-01 | 88.7% | 86.3% |
| 4879540 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.54 | 38.0 | 2.64e-01 | 77.4% | 69.0% |
| 3973720 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.54 | 45.0 | 2.84e-01 | 98.4% | 31.8% |
| 4306563 | 101.1.2.122 ↗ | alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K | 0.54 | 42.0 | 4.07e-01 | 98.4% | 77.1% |
| 3651549 | 2005.1.1.28 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › FAD_syn | 0.54 | 43.0 | 3.10e-01 | 93.5% | 86.4% |
| 4115591 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.53 | 45.0 | 2.81e-01 | 98.4% | 30.9% |
D3
high
residues 398-568
Domain cluster:
rep: putative_eIF-2gamma__YP_003970112__Cafeteria_roenbergensis_virus_BV-PW1__693272__D19-198
Pfam (5)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00009.34 best | GTP_EFTU | 135.4 | 2.50e-39 | 95.3% | 94.2% |
| PF00025.28 | Arf | 26.7 | 5.10e-06 | 94.7% | 87.4% |
| PF00071.29 | Ras | 23.3 | 5.90e-05 | 94.2% | 95.1% |
| PF02421.25 | FeoB_N | 28.5 | 1.40e-06 | 91.8% | 98.1% |
| PF01926.30 | MMR_HSR1 | 48.5 | 1.20e-12 | 62.6% | 99.1% |
D4
high
residues 701-795
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11987.14 best | IF-2 | 123.2 | 7.50e-36 | 93.7% | 76.1% |
CATH (78)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z9bA01 | 3.40.50.10050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor IF- 2, domain 3 | 0.88 | 70.0 | 7.44e-01 | 83.2% | 94.0% |
| 5fg3A03 | 3.40.50.10050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor IF- 2, domain 3 | 0.86 | 81.0 | 7.53e-01 | 100.0% | 84.3% |
| 5nusA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.75 | 64.0 | 4.88e-01 | 92.6% | 96.7% |
| 4fx5A02 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.73 | 65.0 | 5.21e-01 | 98.9% | 97.8% |
| 3a0uA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 64.0 | 6.01e-01 | 96.8% | 97.4% |
| 2qvgA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 64.0 | 5.83e-01 | 98.9% | 97.7% |
| 3lufB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 65.0 | 5.97e-01 | 100.0% | 97.5% |
| 2qv0A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 64.0 | 5.91e-01 | 100.0% | 96.7% |
| 5gizA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.71 | 61.0 | 5.52e-01 | 94.7% | 85.3% |
| 1gcaA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 63.0 | 5.47e-01 | 100.0% | 85.1% |
| 3crnA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 62.0 | 5.63e-01 | 100.0% | 91.5% |
| 5tqjA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 62.0 | 5.64e-01 | 98.9% | 96.0% |
| 4p0tB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 62.0 | 5.33e-01 | 100.0% | 88.7% |
| 6m8oA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 62.0 | 5.74e-01 | 100.0% | 98.3% |
| 1h9cA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 62.0 | 5.97e-01 | 100.0% | 90.6% |
| 1dcfA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 62.0 | 5.51e-01 | 100.0% | 88.7% |
| 3k9cB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 60.0 | 5.42e-01 | 98.9% | 86.3% |
| 5swvC02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.68 | 59.0 | 5.32e-01 | 98.9% | 88.2% |
| 2qzjA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 61.0 | 5.62e-01 | 100.0% | 96.7% |
| 6q2eA01 | 3.40.50.11840 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Diphthamide synthesis DPH1/DPH2 domain 1 | 0.67 | 48.0 | 5.04e-01 | 82.1% | 82.8% |
| 1xmxA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.67 | 55.0 | 4.81e-01 | 91.6% | 87.2% |
| 4ljkG00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 59.0 | 4.60e-01 | 100.0% | 81.2% |
| 1ns5B00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.67 | 59.0 | 5.07e-01 | 100.0% | 90.9% |
| 2yvaA00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.66 | 58.0 | 4.69e-01 | 100.0% | 76.2% |
| 3eagA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 50.0 | 5.08e-01 | 81.1% | 95.7% |
| 4j6fA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 55.0 | 4.60e-01 | 90.5% | 79.9% |
| 3fhlA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 57.0 | 5.11e-01 | 100.0% | 94.9% |
| 3dv9A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.65 | 58.0 | 4.80e-01 | 100.0% | 84.7% |
| 3uenA02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.65 | 51.0 | 5.01e-01 | 95.8% | 77.1% |
| 2otdA01 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.65 | 49.0 | 3.74e-01 | 81.1% | 97.4% |
| 4inoA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.65 | 57.0 | 5.07e-01 | 98.9% | 81.6% |
| 3w5jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 56.0 | 4.53e-01 | 100.0% | 80.4% |
| 3o9zA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 50.0 | 4.59e-01 | 85.3% | 97.7% |
| 3a00A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 54.0 | 5.56e-01 | 98.9% | 96.7% |
| 2fi1A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.64 | 54.0 | 5.02e-01 | 94.7% | 95.9% |
| 1ab5A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 56.0 | 5.17e-01 | 100.0% | 97.6% |
| 3dtyA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 55.0 | 4.56e-01 | 100.0% | 86.2% |
| 2b8eB01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.63 | 56.0 | 5.13e-01 | 98.9% | 94.4% |
| 4navA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.63 | 56.0 | 4.58e-01 | 100.0% | 81.8% |
| 4ms4B02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 56.0 | 4.55e-01 | 100.0% | 87.8% |
| 2r8cA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.63 | 50.0 | 3.55e-01 | 87.4% | 95.4% |
| 1b1aA00 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.63 | 55.0 | 4.90e-01 | 98.9% | 94.9% |
| 2iyeA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.62 | 55.0 | 4.69e-01 | 98.9% | 81.5% |
| 4a15A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 44.0 | 3.62e-01 | 75.8% | 78.5% |
| 3tauA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 54.0 | 4.89e-01 | 100.0% | 84.2% |
| 3e8mA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.62 | 54.0 | 4.54e-01 | 98.9% | 90.2% |
| 1o20A02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.61 | 52.0 | 4.54e-01 | 94.7% | 98.0% |
| 1edzA02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.61 | 55.0 | 4.95e-01 | 100.0% | 77.1% |
| 4b4uA02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.61 | 46.0 | 4.76e-01 | 78.9% | 90.7% |
| 4ovjA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.61 | 54.0 | 4.38e-01 | 98.9% | 69.6% |
| 1im5A00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.61 | 49.0 | 4.06e-01 | 89.5% | 98.9% |
| 7uyyA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.60 | 46.0 | 3.76e-01 | 82.1% | 99.4% |
| 2p9jB00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.60 | 52.0 | 4.47e-01 | 100.0% | 92.0% |
| 2h5gB02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.60 | 52.0 | 4.53e-01 | 97.9% | 97.3% |
| 2wfbA00 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.60 | 52.0 | 4.85e-01 | 96.8% | 84.2% |
| 3m1yC01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.59 | 51.0 | 4.46e-01 | 96.8% | 96.6% |
| 1i36A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 51.0 | 4.41e-01 | 98.9% | 86.8% |
| 3mmzC00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.59 | 50.0 | 4.31e-01 | 97.9% | 90.1% |
| 3f43A01 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.59 | 44.0 | 4.22e-01 | 80.0% | 100.0% |
| 2yx6D01 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.59 | 51.0 | 5.00e-01 | 95.8% | 97.1% |
| 6mvsA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.59 | 52.0 | 4.08e-01 | 98.9% | 98.5% |
| 2pw9C03 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.58 | 49.0 | 4.29e-01 | 89.5% | 87.7% |
| 1o13A00 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.58 | 51.0 | 4.92e-01 | 97.9% | 97.2% |
| 2w8nA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.57 | 49.0 | 3.92e-01 | 94.7% | 99.0% |
| 1us5A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 49.0 | 4.24e-01 | 98.9% | 89.9% |
| 4b28A01 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.57 | 47.0 | 3.72e-01 | 90.5% | 65.8% |
| 3r0xA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 39.0 | 3.62e-01 | 100.0% | 55.3% |
| 1p90A00 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.56 | 49.0 | 4.60e-01 | 100.0% | 92.7% |
| 2ozzA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 49.0 | 4.38e-01 | 98.9% | 70.5% |
| 8bc3B01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 41.0 | 3.25e-01 | 78.9% | 76.2% |
| 3c85A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 44.0 | 3.84e-01 | 87.4% | 83.3% |
| 3mwyW03 | 3.40.50.10810 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain | 0.55 | 44.0 | 3.27e-01 | 88.4% | 40.3% |
| 3un6A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 47.0 | 3.83e-01 | 97.9% | 96.4% |
| 1a6dA03 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.55 | 50.0 | 4.26e-01 | 100.0% | 84.3% |
| 3upuA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 42.0 | 3.52e-01 | 85.3% | 84.1% |
| 6ks6g03 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.54 | 49.0 | 4.13e-01 | 100.0% | 71.2% |
| 2oztA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.53 | 40.0 | 3.18e-01 | 78.9% | 90.6% |
| 2hcuA00 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.53 | 47.0 | 3.85e-01 | 100.0% | 72.3% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 1.00 | 97.0 | 6.94e-01 | 100.0% | 41.3% | |
| 4222239 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 1.00 | 97.0 | 8.24e-01 | 100.0% | 67.9% |
| 4657200 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.99 | 97.0 | 5.89e-01 | 100.0% | 20.2% |
| None | — | 0.99 | 96.0 | 5.95e-01 | 98.9% | 22.9% | |
| None | — | 0.99 | 95.0 | 5.91e-01 | 98.9% | 22.4% | |
| 4315600 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.98 | 95.0 | 8.62e-01 | 100.0% | 79.2% |
| 4048432 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.98 | 95.0 | 6.81e-01 | 100.0% | 41.3% |
| 4312312 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.98 | 95.0 | 8.45e-01 | 100.0% | 76.0% |
| 4654092 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.98 | 95.0 | 8.76e-01 | 100.0% | 82.6% |
| 4111135 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.97 | 95.0 | 8.71e-01 | 100.0% | 82.6% |
| 4483492 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.97 | 94.0 | 8.35e-01 | 100.0% | 76.0% |
| 4578566 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.97 | 94.0 | 9.01e-01 | 100.0% | 90.5% |
| 3476359 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.97 | 94.0 | 7.48e-01 | 100.0% | 57.6% |
| 3506821 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.97 | 94.0 | 7.74e-01 | 100.0% | 64.0% |
| 3958990 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.96 | 93.0 | 8.59e-01 | 100.0% | 83.5% |
| 3586640 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.96 | 92.0 | 6.27e-01 | 100.0% | 33.3% |
| 4029632 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.96 | 92.0 | 8.37e-01 | 100.0% | 83.3% |
| 4198575 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.96 | 92.0 | 8.22e-01 | 100.0% | 76.8% |
| 4605776 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.95 | 92.0 | 8.64e-01 | 100.0% | 86.4% |
| 3991400 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.95 | 91.0 | 6.33e-01 | 100.0% | 36.5% |
| 4683225 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.95 | 90.0 | 8.02e-01 | 98.9% | 75.2% |
| 3628744 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.94 | 91.0 | 6.99e-01 | 100.0% | 51.4% |
| 4194688 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.94 | 90.0 | 8.36e-01 | 100.0% | 82.6% |
| 3683584 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.94 | 90.0 | 7.70e-01 | 100.0% | 85.0% |
| 3818658 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.94 | 90.0 | 7.78e-01 | 100.0% | 70.4% |
| 4210081 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.94 | 90.0 | 6.87e-01 | 100.0% | 50.5% |
| 4462905 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.94 | 90.0 | 8.30e-01 | 100.0% | 82.6% |
| 3849755 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.94 | 90.0 | 5.51e-01 | 100.0% | 20.9% |
| 3787018 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.93 | 89.0 | 7.74e-01 | 100.0% | 70.4% |
| 4015523 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.93 | 89.0 | 7.26e-01 | 100.0% | 59.4% |
| 3192036 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.93 | 88.0 | 7.43e-01 | 98.9% | 64.8% |
| 3737514 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.91 | 86.0 | 7.62e-01 | 100.0% | 73.1% |
| 1148930 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.91 | 85.0 | 7.37e-01 | 100.0% | 69.1% |
| 3729236 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.91 | 86.0 | 7.19e-01 | 100.0% | 64.7% |
| 4027742 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.91 | 87.0 | 7.75e-01 | 100.0% | 84.0% |
| 4977308 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.89 | 85.0 | 7.87e-01 | 100.0% | 84.3% |
| 3612690 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.89 | 84.0 | 6.79e-01 | 100.0% | 58.8% |
| 3594622 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.88 | 83.0 | 6.09e-01 | 100.0% | 43.1% |
| 5001352 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.88 | 84.0 | 7.61e-01 | 100.0% | 80.8% |
| 4947035 | 7526.1.1.7 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › GTP_EFTU_D4 | 0.88 | 84.0 | 7.89e-01 | 100.0% | 88.2% |
| 3481242 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.87 | 82.0 | 7.49e-01 | 100.0% | 80.8% |
| 1827713 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.86 | 81.0 | 7.09e-01 | 100.0% | 72.4% |
| 3275337 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.85 | 80.0 | 7.07e-01 | 100.0% | 73.8% |
| 3604862 | 7526.1.1.2 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › EF-G_D2 | 0.84 | 79.0 | 5.74e-01 | 100.0% | 40.4% |
| 3712654 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.84 | 79.0 | 7.62e-01 | 100.0% | 91.4% |
| 1312902 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.84 | 79.0 | 6.81e-01 | 100.0% | 69.8% |
| 3813109 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.84 | 78.0 | 7.40e-01 | 98.9% | 87.3% |
| 4525885 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.73 | 66.0 | 6.11e-01 | 100.0% | 97.5% |
| 4943043 | 2007.1.3.71 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PAS_4 | 0.72 | 65.0 | 5.84e-01 | 100.0% | 93.8% |
| 4964951 | 2007.15.1.18 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › DUF7509 | 0.70 | 63.0 | 5.21e-01 | 100.0% | 81.8% |
| 2774886 | 2007.1.3.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › OKR_DC_1_N | 0.70 | 63.0 | 5.61e-01 | 100.0% | 88.2% |
| 4990425 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.70 | 63.0 | 5.32e-01 | 100.0% | 94.8% |
| 4947646 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 53.0 | 4.91e-01 | 84.2% | 100.0% |
| 5079823 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.68 | 60.0 | 5.13e-01 | 100.0% | 91.9% |
| 3487007 | 7524.1.1.0 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like | 0.68 | 61.0 | 3.93e-01 | 100.0% | 65.5% |
| 4954581 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.68 | 59.0 | 5.69e-01 | 98.9% | 97.3% |
| 5076409 | 2006.1.6.21 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE | 0.68 | 59.0 | 4.73e-01 | 98.9% | 80.9% |
| 2812996 | 2007.1.2.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Glyco_tran_WecG | 0.67 | 55.0 | 5.19e-01 | 89.5% | 78.9% |
| 4267425 | 2003.1.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N | 0.67 | 52.0 | 4.82e-01 | 83.2% | 95.0% |
| 3746205 | 2006.1.6.34 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › MTBP_N | 0.66 | 57.0 | 4.33e-01 | 96.8% | 99.1% |
| 4954777 | 2007.2.3.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTP-SAK | 0.66 | 56.0 | 4.75e-01 | 98.9% | 57.3% |
| 5022819 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.65 | 49.0 | 4.62e-01 | 78.9% | 90.4% |
| 5009586 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.64 | 49.0 | 3.81e-01 | 81.1% | 64.8% |
| 3481699 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.63 | 54.0 | 4.49e-01 | 95.8% | 89.7% |
| 4981906 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.62 | 49.0 | 4.22e-01 | 87.4% | 91.9% |
| 5043545 | 7597.1.1.0 ↗ | a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain | 0.62 | 52.0 | 5.27e-01 | 93.7% | 97.9% |
| 3412476 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.62 | 51.0 | 4.70e-01 | 91.6% | 86.4% |
| 5014997 | 2006.1.1.17 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_6 | 0.61 | 54.0 | 4.73e-01 | 100.0% | 95.9% |
| 4954319 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.61 | 52.0 | 3.97e-01 | 95.8% | 95.3% |
| 3593334 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.61 | 52.0 | 4.32e-01 | 92.6% | 98.2% |
| 169351 | 2006.1.1.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.61 | 53.0 | 4.51e-01 | 98.9% | 90.2% |
| 5009891 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.61 | 49.0 | 4.02e-01 | 89.5% | 96.2% |
| 4606076 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.61 | 46.0 | 4.57e-01 | 100.0% | 77.6% |
| 5029273 | 2007.2.3.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTP-SAK | 0.61 | 50.0 | 4.18e-01 | 98.9% | 52.5% |
| 3937689 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.60 | 50.0 | 4.34e-01 | 92.6% | 97.3% |
| 5048493 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.60 | 53.0 | 4.48e-01 | 100.0% | 95.6% |
| 4195491 | 2006.1.1.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like | 0.59 | 52.0 | 4.19e-01 | 100.0% | 96.4% |
| 4115166 | 2002.1.1.129 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NanE | 0.59 | 42.0 | 3.20e-01 | 75.8% | 56.7% |
| 4228866 | 2002.1.1.116 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PdxJ | 0.58 | 43.0 | 3.21e-01 | 81.1% | 92.8% |
| 4997385 | 2006.1.1.14 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD | 0.56 | 47.0 | 3.65e-01 | 93.7% | 98.2% |
| 4026037 | 2487.1.1.1 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › Cpn60_TCP1 | 0.54 | 49.0 | 4.22e-01 | 100.0% | 87.6% |
| 3504806 | 2003.1.7.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › AcetylCoA_hydro | 0.53 | 42.0 | 3.13e-01 | 89.5% | 69.5% |
| 5012939 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.53 | 46.0 | 4.27e-01 | 96.8% | 79.2% |
| 3615868 | 2003.1.5.99 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › SRR1 | 0.51 | 41.0 | 3.35e-01 | 92.6% | 69.5% |
| 4990298 | 2007.1.8.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Uroporphyrinogen III synthase (U3S, HemD) | 0.51 | 44.0 | 4.26e-01 | 100.0% | 95.4% |
D5
high
residues 799-895
Domain cluster:
rep: putative_translation_elongation_factor_EF-1_alpha__YP_009052194__Aureococcus_anophagefferens_virus__1474867__D257-340
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03144.32 best | GTP_EFTU_D2 | 30.4 | 5.90e-07 | 67.0% | 90.4% |
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2crvA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.92 | 81.0 | 8.31e-01 | 91.8% | 100.0% |
| 8b6zA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.89 | 73.0 | 7.88e-01 | 85.6% | 100.0% |
| 4zciA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.87 | 76.0 | 7.49e-01 | 90.7% | 89.1% |
| 2hcjB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.86 | 75.0 | 7.61e-01 | 90.7% | 94.7% |
| 1zunB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.86 | 73.0 | 7.57e-01 | 91.8% | 95.6% |
| 5h7jA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.85 | 66.0 | 6.38e-01 | 87.6% | 73.1% |
| 1r5bA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.84 | 71.0 | 7.40e-01 | 91.8% | 96.6% |
| 3e1yE01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.84 | 69.0 | 7.27e-01 | 88.7% | 96.5% |
| 1g7sA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.84 | 73.0 | 7.04e-01 | 91.8% | 88.9% |
| 1xe1A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.84 | 72.0 | 7.44e-01 | 95.9% | 96.7% |
| 1d1nA00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.84 | 76.0 | 7.60e-01 | 96.9% | 94.9% |
| 1vx4404 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.84 | 71.0 | 6.20e-01 | 89.7% | 69.3% |
| 2yweA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.84 | 74.0 | 7.31e-01 | 92.8% | 92.0% |
| 4b43A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.83 | 69.0 | 6.51e-01 | 92.8% | 73.9% |
| 1wb1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.83 | 71.0 | 7.31e-01 | 91.8% | 95.7% |
| 1kk1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.82 | 70.0 | 6.69e-01 | 90.7% | 95.5% |
| 2bm0A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.82 | 70.0 | 6.84e-01 | 90.7% | 84.5% |
| 4he6A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.82 | 67.0 | 7.05e-01 | 91.8% | 94.4% |
| 3p26B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.82 | 71.0 | 6.99e-01 | 91.8% | 93.1% |
| 1g7sA04 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.80 | 68.0 | 7.10e-01 | 90.7% | 100.0% |
| 7syvx01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.78 | 71.0 | 6.27e-01 | 97.9% | 89.1% |
| 3mcaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.78 | 68.0 | 6.35e-01 | 92.8% | 94.1% |
| 2h5eA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 63.0 | 5.25e-01 | 89.7% | 51.2% |
| 3wbiA04 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.77 | 69.0 | 5.99e-01 | 96.9% | 79.3% |
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.76 | 55.0 | 5.63e-01 | 75.3% | 83.0% |
| 2dy1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.75 | 61.0 | 6.18e-01 | 89.7% | 86.6% |
| 3q39B02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.68 | 57.0 | 5.53e-01 | 92.8% | 97.3% |
| 3lq6A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.66 | 55.0 | 5.26e-01 | 91.8% | 99.1% |
| 6j0qA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.65 | 54.0 | 5.25e-01 | 92.8% | 97.2% |
| 4rlzA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.64 | 53.0 | 5.16e-01 | 92.8% | 98.2% |
| 1krhA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 53.0 | 5.37e-01 | 93.8% | 100.0% |
| 3hkzG00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 38.0 | 3.65e-01 | 96.9% | 51.3% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 52.0 | 5.32e-01 | 92.8% | 96.7% |
| 1n08A00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.62 | 54.0 | 4.59e-01 | 93.8% | 88.3% |
| 1vwxB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 52.0 | 4.29e-01 | 92.8% | 76.7% |
| 1vq8B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 52.0 | 4.63e-01 | 92.8% | 83.9% |
| 3bnwB00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.61 | 52.0 | 4.44e-01 | 92.8% | 86.0% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 51.0 | 5.03e-01 | 92.8% | 98.1% |
| 8gz3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 47.0 | 4.87e-01 | 89.7% | 100.0% |
| 3ne5C02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.58 | 51.0 | 5.04e-01 | 97.9% | 99.0% |
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 40.0 | 3.97e-01 | 97.9% | 71.2% |
| 1ulvA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 42.0 | 3.14e-01 | 87.6% | 69.9% |
| 1w9sA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 43.0 | 3.92e-01 | 90.7% | 97.8% |
| 1nepA00 | 2.60.40.770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 3.97e-01 | 89.7% | 81.5% |
| 1ue6D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 35.0 | 3.51e-01 | 91.8% | 64.4% |
| 3obaA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 44.0 | 3.54e-01 | 94.8% | 87.7% |
| 6ec6A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 43.0 | 3.61e-01 | 93.8% | 95.7% |
| 5l73A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 43.0 | 3.51e-01 | 100.0% | 49.4% |
| 2wvxA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 39.0 | 2.89e-01 | 83.5% | 52.2% |
| 6mvfA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 43.0 | 3.75e-01 | 91.8% | 95.9% |
| 7vqmA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 44.0 | 3.67e-01 | 96.9% | 99.4% |
| 3h7jA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 38.0 | 3.62e-01 | 78.4% | 82.5% |
| 2y24A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 36.0 | 3.49e-01 | 94.8% | 65.4% |
| 4qawH03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 42.0 | 3.79e-01 | 90.7% | 95.5% |
| 3bgaA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 42.0 | 3.34e-01 | 94.8% | 90.4% |
| 1nc7A00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.50 | 40.0 | 3.81e-01 | 93.8% | 72.4% |
| 3kt4A02 | 3.60.130.20 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain | 0.50 | 38.0 | 2.74e-01 | 82.5% | 99.4% |
| 7wqxA01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.50 | 36.0 | 3.54e-01 | 99.0% | 69.8% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4097532 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.99 | 96.0 | 9.34e-01 | 100.0% | 92.4% |
| 4338732 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.99 | 94.0 | 9.58e-01 | 97.9% | 100.0% |
| 4275913 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.99 | 96.0 | 9.53e-01 | 100.0% | 97.0% |
| 4132631 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.98 | 89.0 | 9.29e-01 | 92.8% | 100.0% |
| 4233747 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.98 | 93.0 | 9.46e-01 | 97.9% | 100.0% |
| 4164879 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.98 | 92.0 | 8.27e-01 | 96.9% | 75.2% |
| 4606263 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.98 | 95.0 | 9.09e-01 | 100.0% | 89.8% |
| 4356983 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.98 | 95.0 | 8.99e-01 | 100.0% | 88.2% |
| 4114062 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.98 | 95.0 | 9.38e-01 | 100.0% | 97.0% |
| 3688120 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.97 | 91.0 | 8.49e-01 | 96.9% | 100.0% |
| 3395039 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.97 | 94.0 | 8.92e-01 | 100.0% | 91.8% |
| 3268226 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.97 | 94.0 | 9.09e-01 | 100.0% | 93.3% |
| 4642375 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.97 | 92.0 | 9.30e-01 | 97.9% | 100.0% |
| 3506822 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.97 | 92.0 | 9.08e-01 | 97.9% | 100.0% |
| 4584441 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.96 | 93.0 | 9.12e-01 | 100.0% | 94.2% |
| 4116795 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.96 | 92.0 | 8.94e-01 | 100.0% | 91.4% |
| 3455361 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.96 | 93.0 | 9.00e-01 | 100.0% | 99.0% |
| 4658483 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.96 | 92.0 | 9.02e-01 | 100.0% | 94.2% |
| 3178567 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.96 | 90.0 | 8.88e-01 | 96.9% | 100.0% |
| 3940479 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.94 | 91.0 | 8.62e-01 | 100.0% | 92.7% |
| 4037880 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.94 | 89.0 | 9.02e-01 | 99.0% | 100.0% |
| 4538814 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.94 | 90.0 | 8.71e-01 | 100.0% | 92.4% |
| 3596646 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.93 | 88.0 | 8.74e-01 | 97.9% | 100.0% |
| 158849 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.91 | 85.0 | 7.86e-01 | 99.0% | 83.3% |
| 4108526 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.89 | 77.0 | 7.82e-01 | 89.7% | 93.7% |
| 4602602 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.88 | 76.0 | 6.99e-01 | 90.7% | 75.0% |
| 3966468 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.88 | 75.0 | 7.59e-01 | 89.7% | 92.6% |
| 4020023 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.87 | 76.0 | 7.77e-01 | 91.8% | 96.8% |
| 4165709 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.87 | 76.0 | 7.38e-01 | 90.7% | 85.7% |
| 3483799 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.87 | 76.0 | 7.08e-01 | 91.8% | 76.5% |
| 3989019 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.87 | 76.0 | 7.21e-01 | 90.7% | 81.8% |
| 5058339 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.87 | 74.0 | 7.50e-01 | 89.7% | 90.5% |
| 4930313 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.87 | 75.0 | 7.45e-01 | 90.7% | 90.0% |
| 5047262 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.87 | 75.0 | 6.73e-01 | 90.7% | 69.6% |
| 3504500 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.86 | 74.0 | 7.53e-01 | 90.7% | 93.7% |
| 4084726 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.86 | 75.0 | 7.31e-01 | 91.8% | 86.7% |
| 4518161 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.86 | 75.0 | 7.31e-01 | 91.8% | 86.7% |
| 3947061 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.86 | 75.0 | 7.17e-01 | 91.8% | 82.7% |
| 3385442 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.86 | 72.0 | 7.51e-01 | 90.7% | 95.6% |
| 4205494 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.86 | 77.0 | 7.04e-01 | 93.8% | 77.5% |
| 4947034 | 1.1.7.143 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › IF-2 | 0.86 | 76.0 | 7.01e-01 | 93.8% | 85.0% |
| 3407711 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.86 | 75.0 | 7.49e-01 | 92.8% | 94.0% |
| 4158768 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.86 | 75.0 | 7.27e-01 | 91.8% | 86.7% |
| 4948259 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.85 | 72.0 | 4.75e-01 | 88.7% | 25.5% |
| 5049303 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.85 | 76.0 | 6.67e-01 | 93.8% | 75.6% |
| 4146985 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.85 | 74.0 | 7.11e-01 | 91.8% | 82.7% |
| 4943568 | 1.1.7.147 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP-eEF1A_C | 0.85 | 74.0 | 7.55e-01 | 92.8% | 93.7% |
| 4982772 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.85 | 73.0 | 6.40e-01 | 90.7% | 64.4% |
| 3620431 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.85 | 74.0 | 7.09e-01 | 91.8% | 82.7% |
| 4526968 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.85 | 74.0 | 7.20e-01 | 91.8% | 86.7% |
| 3579597 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.85 | 74.0 | 7.05e-01 | 91.8% | 82.7% |
| 4070992 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.85 | 74.0 | 7.05e-01 | 91.8% | 82.7% |
| 4665981 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.85 | 75.0 | 7.27e-01 | 92.8% | 88.6% |
| 3594492 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.84 | 75.0 | 7.32e-01 | 93.8% | 90.5% |
| 3392294 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.84 | 74.0 | 7.33e-01 | 91.8% | 91.0% |
| 3699501 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.84 | 73.0 | 7.06e-01 | 90.7% | 93.3% |
| 4600912 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.84 | 72.0 | 6.44e-01 | 90.7% | 66.9% |
| 4653293 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.84 | 73.0 | 7.02e-01 | 91.8% | 84.5% |
| 4929065 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.84 | 75.0 | 6.83e-01 | 94.8% | 82.4% |
| None | — | 0.84 | 73.0 | 7.29e-01 | 91.8% | 91.0% | |
| 4037780 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.84 | 75.0 | 6.26e-01 | 93.8% | 60.6% |
| 4373119 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.84 | 74.0 | 7.64e-01 | 100.0% | 100.0% |
| 4243239 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.84 | 73.0 | 6.55e-01 | 91.8% | 71.5% |
| 4397998 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.84 | 70.0 | 6.18e-01 | 89.7% | 63.0% |
| 4028218 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.84 | 74.0 | 6.58e-01 | 92.8% | 81.5% |
| 4381865 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.84 | 74.0 | 7.04e-01 | 92.8% | 83.6% |
| 4366946 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.84 | 73.0 | 7.09e-01 | 91.8% | 86.7% |
| 3556029 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.84 | 70.0 | 6.30e-01 | 89.7% | 66.2% |
| 4943444 | 1.1.7.145 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EFG_III | 0.83 | 71.0 | 6.37e-01 | 90.7% | 66.9% |
| 4526935 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.83 | 76.0 | 6.26e-01 | 95.9% | 58.1% |
| 4134860 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.83 | 71.0 | 6.18e-01 | 90.7% | 62.1% |
| 4012780 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.83 | 75.0 | 6.58e-01 | 95.9% | 68.1% |
| 3253743 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.83 | 72.0 | 6.51e-01 | 91.8% | 70.4% |
| 3968632 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.83 | 71.0 | 7.36e-01 | 89.7% | 97.8% |
| 3593939 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.83 | 71.0 | 7.22e-01 | 92.8% | 92.6% |
| 5016702 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.83 | 72.0 | 7.39e-01 | 100.0% | 95.7% |
| 3244784 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.83 | 70.0 | 6.37e-01 | 89.7% | 68.8% |
| 3501569 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.83 | 70.0 | 6.37e-01 | 89.7% | 68.8% |
| 4539652 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.83 | 73.0 | 7.22e-01 | 92.8% | 98.0% |
| 4322679 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.83 | 74.0 | 6.49e-01 | 93.8% | 71.1% |
| 5058835 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.83 | 70.0 | 6.33e-01 | 89.7% | 68.8% |
| 4665951 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.82 | 70.0 | 6.38e-01 | 90.7% | 69.6% |
| 4056457 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.82 | 69.0 | 6.31e-01 | 89.7% | 68.8% |
| 4278212 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.82 | 71.0 | 6.35e-01 | 91.8% | 67.7% |
| 3648086 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.82 | 70.0 | 6.27e-01 | 90.7% | 66.9% |
| 3979323 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.82 | 70.0 | 7.15e-01 | 90.7% | 92.6% |
| 3933370 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.82 | 69.0 | 6.02e-01 | 89.7% | 61.4% |
| 4110344 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.82 | 74.0 | 6.16e-01 | 94.8% | 60.6% |
| 4352697 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.82 | 68.0 | 6.87e-01 | 87.6% | 88.4% |
| 4026980 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.82 | 74.0 | 6.63e-01 | 95.9% | 71.5% |
| 4308556 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.82 | 69.0 | 6.82e-01 | 88.7% | 85.0% |
| 3744748 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.82 | 67.0 | 6.83e-01 | 89.7% | 88.4% |
| 3744838 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.82 | 69.0 | 6.76e-01 | 90.7% | 82.9% |
| 3596330 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.81 | 70.0 | 6.27e-01 | 92.8% | 67.7% |
| 4003349 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.81 | 69.0 | 7.21e-01 | 91.8% | 97.8% |
| 4029670 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.81 | 74.0 | 6.67e-01 | 95.9% | 82.4% |
| 4425983 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.81 | 66.0 | 6.54e-01 | 88.7% | 83.0% |
| 4027927 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.80 | 69.0 | 7.01e-01 | 91.8% | 94.7% |
| 4084925 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.80 | 72.0 | 6.47e-01 | 96.9% | 77.7% |
| 3712302 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.78 | 70.0 | 6.26e-01 | 96.9% | 77.0% |
D6
medium
residues 380-397_603-688
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22042.3 best | EF-G_D2 | 50.9 | 1.90e-13 | 51.9% | 64.3% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b43A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.80 | 68.0 | 6.55e-01 | 88.5% | 96.5% |
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.56 | 32.0 | 3.76e-01 | 76.0% | 84.8% |
| 1vw4F01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.51 | 28.0 | 3.02e-01 | 89.4% | 61.3% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.97 | 91.0 | 5.75e-01 | 96.2% | 74.1% | |
| None | — | 0.96 | 94.0 | 5.91e-01 | 100.0% | 73.3% | |
| 4657200 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.96 | 93.0 | 5.73e-01 | 100.0% | 65.7% |
| 4048432 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.92 | 78.0 | 5.79e-01 | 87.5% | 51.3% |
| 4886574 | 2004.1.1.923 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › EF-G_D2 | 0.91 | 80.0 | 7.43e-01 | 90.4% | 92.0% |
| 4619296 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.91 | 80.0 | 7.41e-01 | 90.4% | 92.0% |
| 4029842 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.90 | 71.0 | 6.82e-01 | 80.8% | 96.5% |
| None | — | 0.90 | 80.0 | 5.91e-01 | 91.3% | 50.4% | |
| 3962338 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.90 | 79.0 | 7.06e-01 | 90.4% | 99.3% |
| 4343364 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.90 | 81.0 | 7.14e-01 | 93.3% | 93.6% |
| 4204869 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.89 | 68.0 | 6.82e-01 | 78.8% | 98.1% |
| 4166205 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.88 | 70.0 | 6.92e-01 | 82.7% | 97.3% |
| 3667743 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.87 | 76.0 | 6.94e-01 | 91.3% | 89.2% |
| 4382801 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.85 | 81.0 | 7.06e-01 | 99.0% | 97.2% |
| 4655249 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.85 | 72.0 | 6.45e-01 | 87.5% | 86.7% |
| 3506820 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.84 | 72.0 | 6.46e-01 | 89.4% | 94.1% |
| 3594624 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.83 | 65.0 | 6.10e-01 | 81.7% | 93.6% |
| 3991400 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.83 | 72.0 | 5.21e-01 | 91.3% | 45.4% |
| 3476360 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.82 | 61.0 | 6.01e-01 | 76.0% | 100.0% |
| 4026980 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.82 | 71.0 | 6.46e-01 | 89.4% | 91.5% |
| 4664583 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.82 | 77.0 | 6.97e-01 | 99.0% | 91.1% |
| 4397164 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.81 | 77.0 | 7.08e-01 | 100.0% | 96.2% |
| 3604862 | 7526.1.1.2 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › EF-G_D2 | 0.80 | 66.0 | 4.97e-01 | 87.5% | 48.8% |
| 3586640 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.80 | 75.0 | 5.31e-01 | 100.0% | 48.8% |
| 4203595 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.80 | 68.0 | 6.29e-01 | 90.4% | 95.4% |
| 3199061 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.79 | 68.0 | 6.39e-01 | 91.3% | 92.8% |
| 4410283 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.79 | 69.0 | 6.39e-01 | 91.3% | 92.8% |
| 3174742 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.79 | 68.0 | 6.07e-01 | 91.3% | 83.6% |
| 3849755 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.78 | 72.0 | 4.63e-01 | 100.0% | 67.2% |
| 3596648 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.78 | 67.0 | 6.24e-01 | 91.3% | 94.4% |
| 4432688 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.78 | 65.0 | 6.17e-01 | 88.5% | 97.5% |
| 3275318 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.77 | 70.0 | 6.30e-01 | 97.1% | 99.3% |
| 4028057 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.77 | 66.0 | 6.07e-01 | 91.3% | 93.1% |
| 3712655 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.75 | 64.0 | 5.90e-01 | 91.3% | 91.5% |
| 5022443 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.62 | 43.0 | 4.67e-01 | 71.2% | 93.3% |
| 5077048 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 41.0 | 4.52e-01 | 73.1% | 95.3% |