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CAKLQH020000015.1__CAH1088652.1__SAMEA5780036_02273__00012
Bact-VirCAKLQH020000015.1__CAH1088652.1__SAMEA5780036_02273__00012
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-196
Domain cluster:
representative
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2iz6A00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.75 | 59.0 | 6.46e-01 | 100.0% | 96.9% |
| 4ljkG00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.73 | 64.0 | 6.20e-01 | 100.0% | 81.7% |
| 1p5jA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.70 | 36.0 | 5.00e-01 | 71.4% | 100.0% |
| 1t35E00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 60.0 | 6.13e-01 | 100.0% | 97.8% |
| 1y7lA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 37.0 | 4.93e-01 | 79.7% | 100.0% |
| 1ydhA00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 59.0 | 6.09e-01 | 100.0% | 96.7% |
| 3quaA00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 58.0 | 6.05e-01 | 100.0% | 98.3% |
| 1fs5A00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 54.0 | 4.82e-01 | 89.1% | 96.6% |
| 4gywA05 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.61 | 45.0 | 4.91e-01 | 100.0% | 90.1% |
| 2p2sA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 41.0 | 4.80e-01 | 100.0% | 94.9% |
| 3vbcA00 | 3.40.50.11530 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 41.0 | 4.74e-01 | 100.0% | 95.6% |
| 3ezyA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 36.0 | 4.51e-01 | 94.8% | 98.3% |
| 3euwA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 36.0 | 4.43e-01 | 94.3% | 97.5% |
| 3rotA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 34.0 | 4.03e-01 | 94.8% | 81.8% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.58 | 46.0 | 4.23e-01 | 84.9% | 81.6% |
| 3sdbA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.58 | 46.0 | 4.59e-01 | 84.9% | 82.1% |
| 4j6fA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 41.0 | 4.50e-01 | 88.0% | 89.3% |
| 1kjnA00 | 3.40.50.10160 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MTH777-like | 0.57 | 42.0 | 4.66e-01 | 100.0% | 97.4% |
| 1t5fA00 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.56 | 46.0 | 3.91e-01 | 85.4% | 93.3% |
| 3moiA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 40.0 | 4.17e-01 | 100.0% | 78.9% |
| 1xr4A02 | 3.40.1080.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaconate Coenzyme A-transferase › Glutaconate Coenzyme A-transferase | 0.55 | 49.0 | 4.37e-01 | 96.4% | 79.6% |
| 1gkuB05 | 3.40.50.140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 34.0 | 4.10e-01 | 97.9% | 95.9% |
| 1afsA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.55 | 50.0 | 4.24e-01 | 100.0% | 84.0% |
| 7bipB01 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.54 | 50.0 | 4.19e-01 | 100.0% | 97.2% |
| 4n82B00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.54 | 40.0 | 4.36e-01 | 100.0% | 95.4% |
| 1exbA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.53 | 49.0 | 4.11e-01 | 100.0% | 89.3% |
| 3qk7C02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 39.0 | 4.37e-01 | 94.8% | 100.0% |
| 1y42X01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 45.0 | 4.08e-01 | 91.1% | 78.3% |
| 3e18A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 37.0 | 4.28e-01 | 83.9% | 100.0% |
| 4iuyA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 42.0 | 3.90e-01 | 84.9% | 93.3% |
| 2vg0A00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.53 | 48.0 | 4.54e-01 | 99.5% | 97.8% |
| 1mi3A00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.52 | 48.0 | 4.07e-01 | 100.0% | 84.6% |
| 4koaA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 33.0 | 4.05e-01 | 73.4% | 100.0% |
| 5hj9A00 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.52 | 43.0 | 3.73e-01 | 89.1% | 92.3% |
| 2b34A00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.52 | 41.0 | 4.12e-01 | 100.0% | 81.2% |
| 3rc1A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 34.0 | 4.07e-01 | 76.6% | 100.0% |
| 2wsiA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 41.0 | 3.60e-01 | 84.9% | 55.8% |
| 4x9xA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 35.0 | 3.93e-01 | 100.0% | 89.3% |
| 4wghA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.51 | 47.0 | 4.14e-01 | 100.0% | 84.8% |
| 3u80A00 | 3.40.50.9100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II | 0.51 | 33.0 | 3.92e-01 | 100.0% | 97.6% |
| 7paxA01 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.51 | 46.0 | 4.20e-01 | 100.0% | 84.5% |
| 3v4cA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.50 | 46.0 | 4.62e-01 | 99.5% | 99.0% |
| 3e82B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 35.0 | 3.95e-01 | 100.0% | 93.8% |
| 4rg1A01 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.50 | 46.0 | 4.59e-01 | 100.0% | 97.0% |
| 1vlpA00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.50 | 40.0 | 3.14e-01 | 83.9% | 62.0% |
| 4jc8A01 | 3.40.50.2060 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 | 0.50 | 34.0 | 3.95e-01 | 83.9% | 97.1% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5039183 | 7563.1.1.8 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › LDcluster4 | 0.79 | 62.0 | 6.82e-01 | 100.0% | 96.9% |
| 4251393 | 7543.1.1.2 ↗ | a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › MGS | 0.70 | 48.0 | 5.02e-01 | 100.0% | 76.0% |
| 4954716 | 7563.1.1.2 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › Lysine_decarbox | 0.69 | 60.0 | 6.30e-01 | 98.4% | 99.4% |
| 4935839 | 7563.1.1.2 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › Lysine_decarbox | 0.68 | 60.0 | 6.09e-01 | 100.0% | 93.7% |
| 3973047 | 7563.1.1.0 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related | 0.68 | 60.0 | 6.08e-01 | 100.0% | 93.2% |
| 4470291 | 7563.1.1.2 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › Lysine_decarbox | 0.68 | 60.0 | 6.07e-01 | 100.0% | 93.7% |
| 3451611 | 7563.1.1.2 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › Lysine_decarbox | 0.68 | 60.0 | 6.08e-01 | 100.0% | 93.7% |
| 4498702 | 7563.1.1.2 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › Lysine_decarbox | 0.67 | 60.0 | 6.06e-01 | 100.0% | 94.7% |
| 3423040 | 7563.1.1.2 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › Lysine_decarbox | 0.67 | 59.0 | 5.83e-01 | 100.0% | 86.8% |
| 3951574 | 7563.1.1.2 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › Lysine_decarbox | 0.67 | 58.0 | 5.95e-01 | 100.0% | 94.1% |
| 5039866 | 2007.1.14.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like | 0.67 | 40.0 | 4.95e-01 | 99.5% | 96.5% |
| None | — | 0.67 | 61.0 | 6.00e-01 | 100.0% | 91.0% | |
| 3587658 | 7563.1.1.2 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › Lysine_decarbox | 0.66 | 60.0 | 6.03e-01 | 100.0% | 94.7% |
| 4889382 | 109.3.1.167 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ion_trans, TRPM2 | 0.66 | 62.0 | 4.37e-01 | 100.0% | 50.8% |
| 3209470 | 7512.1.1.95 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › PF28142 | 0.64 | 45.0 | 4.74e-01 | 96.4% | 77.7% |
| 3685071 | 7563.1.1.2 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › Lysine_decarbox | 0.64 | 60.0 | 5.54e-01 | 100.0% | 94.6% |
| 4279002 | 7563.1.1.2 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › Lysine_decarbox | 0.64 | 60.0 | 5.72e-01 | 100.0% | 88.6% |
| 4156939 | 7512.1.1.8 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 | 0.63 | 46.0 | 4.83e-01 | 100.0% | 82.9% |
| 3270244 | 2003.1.7.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › Glucosamine_iso | 0.63 | 51.0 | 4.58e-01 | 85.4% | 89.6% |
| 4042232 | 2003.1.7.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › Glucosamine_iso | 0.63 | 52.0 | 4.46e-01 | 86.5% | 94.9% |
| 5081219 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.62 | 51.0 | 4.69e-01 | 86.5% | 74.7% |
| 4004421 | 2003.1.7.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › Glucosamine_iso | 0.62 | 51.0 | 4.80e-01 | 86.5% | 98.3% |
| 4974556 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.61 | 43.0 | 4.33e-01 | 100.0% | 70.5% |
| None | — | 0.57 | 46.0 | 4.23e-01 | 84.9% | 82.0% | |
| 5045919 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.57 | 42.0 | 4.36e-01 | 97.9% | 79.5% |
| 3211938 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.56 | 37.0 | 3.88e-01 | 100.0% | 72.6% |
| 3970745 | 7570.1.1.0 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain | 0.56 | 37.0 | 4.15e-01 | 87.0% | 89.3% |
| 4058516 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.55 | 43.0 | 4.32e-01 | 97.9% | 80.5% |
| 3614992 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.55 | 50.0 | 3.96e-01 | 100.0% | 82.7% |
| 4664976 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.55 | 43.0 | 4.04e-01 | 83.3% | 84.9% |
| 3719129 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.55 | 50.0 | 3.82e-01 | 100.0% | 84.4% |
| 5000451 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.55 | 50.0 | 4.69e-01 | 100.0% | 95.4% |
| 4972078 | 2003.1.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N | 0.54 | 41.0 | 4.32e-01 | 86.5% | 86.3% |
| 4032518 | 2003.1.7.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like | 0.54 | 44.0 | 4.41e-01 | 86.5% | 96.4% |
| 4997157 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.53 | 48.0 | 4.10e-01 | 100.0% | 92.2% |
| 4983043 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.53 | 48.0 | 4.39e-01 | 97.9% | 86.4% |
| 3585701 | 7512.1.1.18 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycogen_syn | 0.53 | 45.0 | 4.10e-01 | 91.7% | 71.4% |
| 4442590 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.52 | 47.0 | 4.31e-01 | 99.5% | 86.4% |
| 5029139 | 2002.3.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 | 0.52 | 48.0 | 4.29e-01 | 100.0% | 93.6% |
| 5036386 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.52 | 47.0 | 4.45e-01 | 97.9% | 96.0% |
| 3275946 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.51 | 40.0 | 4.31e-01 | 83.3% | 96.3% |
| 3613770 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.51 | 35.0 | 4.02e-01 | 95.3% | 94.2% |
| 3723963 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.51 | 47.0 | 3.88e-01 | 100.0% | 87.0% |
| 4067125 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.51 | 46.0 | 3.43e-01 | 100.0% | 55.9% |
| 3247500 | 2006.1.5.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Arginase | 0.51 | 44.0 | 3.82e-01 | 96.4% | 90.8% |
| 4948801 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.50 | 36.0 | 3.41e-01 | 74.5% | 86.3% |
| 4243335 | 2004.1.1.201 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 | 0.50 | 45.0 | 4.31e-01 | 100.0% | 95.7% |
D2
medium
residues 205-258