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CAKLQH020000015.1__CAH1088794.1__SAMEA5780036_02313__00052
Bact-VirCAKLQH020000015.1__CAH1088794.1__SAMEA5780036_02313__00052
Identity
- Kingdom:
- phage
Quality
68.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 130-230
D2
medium
residues 9-122_376-419
Domain cluster:
rep: IMGVR_UViG_3300025471_000009-3300025471-Ga0209508_100072415__D4-35_84-206_547-576
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wthD01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.77 | 50.0 | 6.05e-01 | 70.3% | 98.1% |
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.65 | 53.0 | 5.11e-01 | 84.8% | 98.3% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.65 | 42.0 | 4.89e-01 | 79.7% | 91.9% |
| 3bpnC03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 32.0 | 3.90e-01 | 70.9% | 74.3% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.62 | 52.0 | 5.09e-01 | 88.0% | 100.0% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.62 | 40.0 | 4.59e-01 | 82.3% | 87.2% |
| 5is2A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 28.0 | 3.63e-01 | 74.1% | 73.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3059162 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.82 | 58.0 | 6.52e-01 | 71.5% | 99.2% |
| 2137681 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.67 | 42.0 | 4.97e-01 | 79.7% | 91.7% |
| 3741921 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.66 | 41.0 | 4.93e-01 | 71.5% | 93.3% |
| 4057590 | 1.1.5.86 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN3 | 0.65 | 46.0 | 4.85e-01 | 82.3% | 80.7% |
| 3365684 | 306.6.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like | 0.61 | 33.0 | 4.15e-01 | 72.8% | 84.0% |
| 3469690 | 11.2.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 | 0.55 | 33.0 | 3.69e-01 | 81.0% | 75.8% |
| 3930059 | 11.2.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL | 0.55 | 31.0 | 3.63e-01 | 79.1% | 79.1% |
| 3913172 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.53 | 41.0 | 3.65e-01 | 80.4% | 78.0% |
D3
medium
residues 266-309_333-375
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.66 | 37.0 | 2.95e-01 | 100.0% | 28.0% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3925677 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.57 | 41.0 | 3.66e-01 | 74.7% | 98.3% |
| 4977743 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.51 | 37.0 | 2.93e-01 | 77.0% | 87.6% |