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CAKLQH020000016.1__CAH1089186.1__SAMEA5780036_02448__00017
Bact-VirCAKLQH020000016.1__CAH1089186.1__SAMEA5780036_02448__00017
Identity
- Kingdom:
- phage
Quality
92.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 43-193
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01799.26 best | Fer2_2 | 104.7 | 3.20e-30 | 53.0% | 89.3% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.60 | 31.0 | 3.90e-01 | 81.5% | 83.1% |
| 7bjkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.55 | 32.0 | 3.61e-01 | 94.0% | 73.5% |
| 3djbA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.54 | 35.0 | 4.10e-01 | 82.8% | 99.0% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 35.0 | 3.94e-01 | 90.7% | 86.7% |
| 5jbrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 29.0 | 3.60e-01 | 80.1% | 96.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3438510 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.63 | 41.0 | 4.87e-01 | 92.7% | 99.0% |
| 185297 | 6035.1.1.2 ↗ | alpha bundles › Primase helical domain › Primase helical domain › Primase helical domain › RepB_primase_C | 0.60 | 31.0 | 3.90e-01 | 81.5% | 83.1% |
| 3707744 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 34.0 | 3.90e-01 | 72.8% | 83.8% |
| 3718570 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.52 | 38.0 | 4.13e-01 | 99.3% | 92.0% |
| 4397294 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.52 | 41.0 | 4.18e-01 | 83.4% | 88.3% |
| 3660568 | 101.1.10.21 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C | 0.51 | 42.0 | 3.53e-01 | 88.7% | 98.5% |
| 4024893 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.50 | 36.0 | 2.87e-01 | 73.5% | 80.6% |
D2
high
residues 376-483
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03450.23 best | CO_deh_flav_C | 108.5 | 2.40e-31 | 95.4% | 98.0% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w3sA05 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.96 | 89.0 | 9.12e-01 | 97.2% | 100.0% |
| 4zohB03 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.93 | 84.0 | 8.64e-01 | 99.1% | 100.0% |
| 2e1qC05 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.92 | 88.0 | 8.51e-01 | 100.0% | 93.2% |
| 1rm6B02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.89 | 82.0 | 8.26e-01 | 100.0% | 98.1% |
| 1n62C02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.88 | 81.0 | 8.23e-01 | 99.1% | 100.0% |
| 3hrdC02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.87 | 83.0 | 8.15e-01 | 100.0% | 95.6% |
| 1t3qC03 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.86 | 79.0 | 7.83e-01 | 100.0% | 95.5% |
| 5y6qB02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.85 | 76.0 | 7.74e-01 | 100.0% | 97.2% |
| 5g5gB02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.84 | 69.0 | 7.32e-01 | 100.0% | 98.9% |
| 1xe4A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.69 | 41.0 | 3.58e-01 | 100.0% | 39.0% |
| 1eqfA02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.60 | 44.0 | 4.23e-01 | 75.9% | 89.6% |
| 5u9nB00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.56 | 41.0 | 3.98e-01 | 75.9% | 94.2% |
| 3u5nA02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.56 | 41.0 | 3.96e-01 | 75.9% | 95.0% |
| 2yw5A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.56 | 40.0 | 3.74e-01 | 75.0% | 78.3% |
| 1e3hA01 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.56 | 50.0 | 3.84e-01 | 99.1% | 99.6% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 36.0 | 3.75e-01 | 73.1% | 71.4% |
| 1yvuA04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 42.0 | 3.43e-01 | 87.0% | 41.1% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 43.0 | 3.34e-01 | 98.1% | 36.5% |
| 6jhpA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.55 | 39.0 | 2.81e-01 | 73.1% | 64.6% |
| 3he1A00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.55 | 38.0 | 3.44e-01 | 72.2% | 95.9% |
| 3dtdD00 | 2.60.40.1880 | Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein | 0.53 | 48.0 | 4.35e-01 | 100.0% | 81.4% |
| 1kpsC00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.53 | 42.0 | 3.77e-01 | 87.0% | 76.9% |
| 3vsfC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 37.0 | 2.62e-01 | 73.1% | 44.2% |
| 6nyoA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.52 | 41.0 | 3.51e-01 | 87.0% | 77.7% |
| 4jhmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.50 | 44.0 | 4.36e-01 | 100.0% | 91.5% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4944195 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.96 | 92.0 | 9.19e-01 | 100.0% | 97.3% |
| 6729 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.95 | 91.0 | 8.83e-01 | 100.0% | 91.5% |
| 4983770 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.94 | 88.0 | 8.81e-01 | 100.0% | 96.4% |
| 4008746 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.93 | 89.0 | 8.72e-01 | 100.0% | 97.4% |
| 3656126 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.92 | 89.0 | 7.96e-01 | 100.0% | 80.0% |
| 2997057 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.92 | 88.0 | 8.29e-01 | 100.0% | 87.3% |
| 3393407 | 325.1.1.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like | 0.92 | 88.0 | 5.89e-01 | 100.0% | 31.0% |
| 3185224 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.92 | 88.0 | 7.95e-01 | 100.0% | 78.6% |
| 5009443 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.92 | 84.0 | 8.59e-01 | 98.1% | 99.0% |
| 3836527 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.92 | 88.0 | 7.78e-01 | 100.0% | 77.2% |
| 4096099 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.92 | 88.0 | 8.43e-01 | 100.0% | 91.7% |
| 4424281 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.91 | 87.0 | 7.99e-01 | 100.0% | 81.5% |
| 5059335 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.91 | 86.0 | 8.60e-01 | 100.0% | 97.3% |
| 4302484 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.91 | 87.0 | 8.53e-01 | 100.0% | 95.7% |
| 3760745 | 217.1.1.0 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain | 0.91 | 87.0 | 5.27e-01 | 100.0% | 19.0% |
| 4991366 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.91 | 86.0 | 8.61e-01 | 100.0% | 99.1% |
| 5061403 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.91 | 86.0 | 8.53e-01 | 99.1% | 98.2% |
| 5076493 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.91 | 86.0 | 8.61e-01 | 100.0% | 98.2% |
| 3653276 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.90 | 86.0 | 7.87e-01 | 100.0% | 84.4% |
| 3936335 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.90 | 86.0 | 8.59e-01 | 100.0% | 98.2% |
| 3517332 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.90 | 85.0 | 8.48e-01 | 99.1% | 97.3% |
| 4290696 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.89 | 83.0 | 8.27e-01 | 100.0% | 96.4% |
| 6731 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.89 | 82.0 | 8.26e-01 | 100.0% | 98.1% |
| 2813943 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.89 | 83.0 | 8.11e-01 | 100.0% | 92.2% |
| 3836690 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.89 | 85.0 | 7.74e-01 | 100.0% | 83.0% |
| 3959833 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.88 | 79.0 | 8.07e-01 | 100.0% | 98.1% |
| 3959464 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.87 | 82.0 | 8.20e-01 | 100.0% | 98.2% |
| 5059789 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.87 | 78.0 | 7.83e-01 | 100.0% | 93.6% |
| 366771 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.87 | 82.0 | 8.06e-01 | 100.0% | 93.9% |
| 4961682 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.87 | 82.0 | 8.06e-01 | 100.0% | 98.2% |
| 4872155 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.87 | 80.0 | 8.09e-01 | 100.0% | 99.1% |
| 6730 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.86 | 78.0 | 7.85e-01 | 100.0% | 96.3% |
| 3278763 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.86 | 80.0 | 7.85e-01 | 98.1% | 94.8% |
| 4984391 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.85 | 79.0 | 7.95e-01 | 100.0% | 99.1% |
| 4175964 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.85 | 74.0 | 7.69e-01 | 100.0% | 99.0% |
| 3285947 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.84 | 76.0 | 7.74e-01 | 98.1% | 99.0% |
| 4479921 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.83 | 75.0 | 7.38e-01 | 100.0% | 92.2% |
| 5009465 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.82 | 75.0 | 7.48e-01 | 98.1% | 98.2% |
| 5062193 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.79 | 74.0 | 7.41e-01 | 99.1% | 97.3% |
| 5078536 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.77 | 71.0 | 7.10e-01 | 99.1% | 98.2% |
| 5076031 | 244.3.1.7 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › DUF166 | 0.69 | 53.0 | 5.37e-01 | 81.5% | 82.9% |
| 4936266 | 244.3.1.7 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › DUF166 | 0.66 | 51.0 | 5.54e-01 | 85.2% | 100.0% |
| 4097801 | 3518.1.1.0 ↗ | a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex | 0.61 | 55.0 | 4.80e-01 | 100.0% | 97.6% |
| 3830017 | 633.1.1.1 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain | 0.59 | 43.0 | 4.12e-01 | 75.0% | 88.6% |
| 3288799 | 206.1.3.25 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_4 | 0.57 | 40.0 | 2.94e-01 | 73.1% | 62.6% |
| 3907317 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.56 | 43.0 | 3.21e-01 | 99.1% | 33.1% |
| 3239553 | 216.1.1.1 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con | 0.56 | 42.0 | 4.25e-01 | 80.6% | 93.6% |
| 3208973 | 4099.1.1.4 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-O | 0.53 | 36.0 | 3.59e-01 | 81.5% | 65.8% |
| 3488824 | 11.2.1.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › B9-C2 | 0.53 | 41.0 | 2.89e-01 | 82.4% | 40.1% |
| 3195246 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.52 | 33.0 | 3.67e-01 | 98.1% | 81.2% |
| 3872130 | 11.2.1.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › B9-C2 | 0.52 | 41.0 | 2.83e-01 | 85.2% | 36.6% |
| 3737478 | 216.1.1.1 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con | 0.51 | 40.0 | 3.59e-01 | 84.3% | 75.5% |
| 3551338 | 103.4.1.28 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Med15_C | 0.51 | 36.0 | 3.65e-01 | 81.5% | 73.6% |
| 3863975 | 4044.1.1.24 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Med15_C | 0.51 | 36.0 | 3.60e-01 | 74.1% | 72.7% |
| 5046066 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.50 | 37.0 | 3.74e-01 | 100.0% | 77.1% |
| 3509053 | 216.1.1.17 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C | 0.50 | 37.0 | 3.49e-01 | 76.9% | 65.4% |
D3
medium
residues 196-253
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w3sA03 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.97 | 76.0 | 8.16e-01 | 81.0% | 94.0% |
| 4uhwA03 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.92 | 84.0 | 7.96e-01 | 100.0% | 85.1% |
| 2e3tB03 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.91 | 84.0 | 8.31e-01 | 100.0% | 95.1% |
| 1n62C01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.82 | 64.0 | 6.65e-01 | 84.5% | 92.6% |
| 5d79B01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.73 | 65.0 | 5.52e-01 | 98.3% | 91.4% |
| 3pm9A01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.72 | 65.0 | 5.52e-01 | 100.0% | 84.9% |
| 2ipiA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.71 | 62.0 | 4.15e-01 | 100.0% | 33.8% |
| 1zr6A01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.69 | 58.0 | 5.01e-01 | 94.8% | 83.5% |
| 3upuA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 54.0 | 3.94e-01 | 100.0% | 77.3% |
| 3gr0D01 | 3.30.70.1780 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 42.0 | 4.74e-01 | 94.8% | 97.6% |
| 7fc0E01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.62 | 47.0 | 3.16e-01 | 87.9% | 89.2% |
| 1k7hA00 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.61 | 50.0 | 2.99e-01 | 94.8% | 29.8% |
| 1hfeL03 | 3.40.950.10 | Alpha Beta › 3-Layer(aba) Sandwich › Fe-only Hydrogenase (Larger Subunit); Chain L, domain 3 › Fe-only Hydrogenase (Larger Subunit); Chain L, domain 3 | 0.60 | 40.0 | 3.14e-01 | 70.7% | 35.0% |
| 3cxgA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.60 | 51.0 | 4.12e-01 | 100.0% | 55.7% |
| 1xriA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.59 | 48.0 | 3.75e-01 | 100.0% | 62.3% |
| 1c4oA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 50.0 | 3.71e-01 | 96.6% | 43.8% |
| 4pbcA02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.58 | 35.0 | 2.71e-01 | 100.0% | 25.8% |
| 3l8dA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 43.0 | 2.95e-01 | 100.0% | 22.8% |
| 5vanA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 40.0 | 2.47e-01 | 75.9% | 76.2% |
| 2dbuB00 | 3.60.20.40 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit | 0.57 | 36.0 | 2.54e-01 | 100.0% | 18.9% |
| 3rgoA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.57 | 48.0 | 3.62e-01 | 100.0% | 61.8% |
| 6j0pA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.57 | 44.0 | 2.96e-01 | 87.9% | 78.5% |
| 1urhA02 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.57 | 40.0 | 3.26e-01 | 75.9% | 76.5% |
| 5z2xA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 40.0 | 2.58e-01 | 79.3% | 65.5% |
| 1nm2A02 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.56 | 38.0 | 2.61e-01 | 72.4% | 66.4% |
| 4alzA03 | 3.30.70.1770 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 40.0 | 3.95e-01 | 100.0% | 71.9% |
| 1ipaA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.55 | 42.0 | 3.27e-01 | 89.7% | 66.7% |
| 1m9nA04 | 3.40.50.1380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain | 0.55 | 42.0 | 2.97e-01 | 86.2% | 89.3% |
| 2prsA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.55 | 42.0 | 3.45e-01 | 86.2% | 88.6% |
| 4cbgD02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 44.0 | 3.30e-01 | 93.1% | 47.8% |
| 1a1vA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 45.0 | 3.58e-01 | 100.0% | 48.1% |
| 1vecA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 44.0 | 3.18e-01 | 100.0% | 76.2% |
| 4wz9A02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.53 | 41.0 | 2.78e-01 | 89.7% | 73.6% |
| 3qp9D00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 40.0 | 2.46e-01 | 91.4% | 29.3% |
| 4h51A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 44.0 | 2.91e-01 | 100.0% | 73.6% |
| 2vy9A00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.51 | 39.0 | 3.20e-01 | 86.2% | 99.1% |
| 2p97A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 38.0 | 2.76e-01 | 87.9% | 63.7% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3970971 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.97 | 92.0 | 6.20e-01 | 100.0% | 32.2% |
| 3928916 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.94 | 87.0 | 5.65e-01 | 100.0% | 25.8% |
| 3640344 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.94 | 87.0 | 5.53e-01 | 100.0% | 23.7% |
| 3776464 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.92 | 84.0 | 5.47e-01 | 100.0% | 25.9% |
| 3509503 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.92 | 84.0 | 5.62e-01 | 100.0% | 29.0% |
| 3846733 | 217.1.1.0 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain | 0.91 | 82.0 | 4.76e-01 | 100.0% | 12.5% |
| 3393445 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.90 | 82.0 | 5.35e-01 | 100.0% | 25.8% |
| 3288993 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.90 | 76.0 | 5.20e-01 | 89.7% | 29.7% |
| 3872295 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.90 | 82.0 | 5.34e-01 | 100.0% | 25.2% |
| 3760745 | 217.1.1.0 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain | 0.89 | 82.0 | 4.60e-01 | 100.0% | 10.1% |
| 3334173 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.89 | 82.0 | 5.47e-01 | 100.0% | 29.5% |
| 3920594 | 217.1.1.0 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain | 0.89 | 81.0 | 4.73e-01 | 100.0% | 13.3% |
| 4651264 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.85 | 70.0 | 4.79e-01 | 87.9% | 29.4% |
| 4155919 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.85 | 68.0 | 4.85e-01 | 87.9% | 31.5% |
| 4961681 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.83 | 68.0 | 4.75e-01 | 87.9% | 30.0% |
| 4007558 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.83 | 65.0 | 4.56e-01 | 84.5% | 28.8% |
| 7154 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.81 | 66.0 | 4.64e-01 | 87.9% | 29.0% |
| 1734642 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.81 | 65.0 | 4.63e-01 | 87.9% | 30.0% |
| 4982667 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.81 | 65.0 | 4.61e-01 | 87.9% | 30.0% |
| 3290403 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.80 | 64.0 | 4.38e-01 | 87.9% | 26.2% |
| 3962951 | 217.1.1.0 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain | 0.78 | 60.0 | 4.25e-01 | 87.9% | 28.0% |
| 4673953 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.77 | 62.0 | 4.11e-01 | 87.9% | 23.2% |
| 3446768 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.71 | 64.0 | 4.18e-01 | 100.0% | 24.7% |
| 4862962 | 212.1.1.2 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_gyraseB | 0.70 | 39.0 | 4.48e-01 | 89.7% | 77.5% |
| 4981838 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.69 | 62.0 | 4.21e-01 | 100.0% | 36.6% |
| 3986170 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 57.0 | 3.63e-01 | 96.6% | 20.0% |
| 3671836 | 2003.1.5.140 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › IRX15_IRX15L_GXM | 0.67 | 48.0 | 3.07e-01 | 75.9% | 59.3% |
| 3393984 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 59.0 | 3.79e-01 | 100.0% | 41.1% |
| 5061402 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.65 | 53.0 | 3.64e-01 | 87.9% | 28.1% |
| 5003521 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 52.0 | 4.43e-01 | 96.6% | 72.4% |
| 3490099 | 2007.2.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc | 0.64 | 55.0 | 4.17e-01 | 100.0% | 61.7% |
| 3608167 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.64 | 53.0 | 3.68e-01 | 93.1% | 28.6% |
| 4246539 | 2007.1.7.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › DHQ_synthase | 0.64 | 54.0 | 3.95e-01 | 100.0% | 95.4% |
| 3390038 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.63 | 51.0 | 3.40e-01 | 93.1% | 25.9% |
| 5021991 | 7572.1.1.0 ↗ | a/b three-layered sandwiches › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain | 0.62 | 52.0 | 4.30e-01 | 100.0% | 80.0% |
| 4950764 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.62 | 52.0 | 3.26e-01 | 96.6% | 22.7% |
| 4299663 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.62 | 51.0 | 3.61e-01 | 100.0% | 72.9% |
| 4930312 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.62 | 51.0 | 3.51e-01 | 100.0% | 83.0% |
| 3891554 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.60 | 48.0 | 3.35e-01 | 96.6% | 25.7% |
| 4946862 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 48.0 | 3.36e-01 | 93.1% | 34.8% |
| 3088345 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 49.0 | 3.66e-01 | 96.6% | 44.5% |
| 3176271 | 2007.2.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase2 | 0.59 | 49.0 | 3.53e-01 | 100.0% | 49.2% |
| 4065433 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 48.0 | 3.18e-01 | 96.6% | 23.2% |
| 5063746 | 2498.1.1.9 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 | 0.59 | 44.0 | 3.08e-01 | 86.2% | 53.8% |
| 3325628 | 4230.1.1.0 ↗ | alpha arrays › DnaD domain › DnaD domain › DnaD domain | 0.59 | 47.0 | 3.95e-01 | 94.8% | 73.6% |
| 4954777 | 2007.2.3.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTP-SAK | 0.59 | 48.0 | 3.72e-01 | 100.0% | 62.0% |
| 3737889 | 2007.2.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase2 | 0.58 | 48.0 | 3.53e-01 | 100.0% | 57.3% |
| 5013139 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.58 | 42.0 | 3.32e-01 | 82.8% | 60.7% |
| 5021937 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.58 | 47.0 | 3.54e-01 | 96.6% | 45.5% |
| 3266370 | 2007.2.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase2 | 0.58 | 47.0 | 3.53e-01 | 100.0% | 54.9% |
| 3700447 | 2007.2.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc | 0.58 | 47.0 | 3.56e-01 | 100.0% | 54.7% |
| 5071477 | 2007.2.3.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTP-SAK | 0.57 | 46.0 | 3.58e-01 | 100.0% | 58.1% |
| 3599252 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.57 | 46.0 | 3.44e-01 | 100.0% | 51.4% |
| 3264905 | 2007.2.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc | 0.56 | 46.0 | 3.38e-01 | 100.0% | 49.2% |
| 3387998 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.56 | 50.0 | 4.31e-01 | 100.0% | 98.9% |
| 3312421 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 44.0 | 3.32e-01 | 98.3% | 37.6% |
| 4558199 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.54 | 40.0 | 3.16e-01 | 84.5% | 77.9% |
| 3185090 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.54 | 38.0 | 2.69e-01 | 82.8% | 79.2% |
| 4993669 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.52 | 42.0 | 2.95e-01 | 96.6% | 34.5% |
| 991597 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.51 | 37.0 | 3.12e-01 | 82.8% | 50.9% |
| 3209291 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 38.0 | 2.33e-01 | 82.8% | 20.5% |
D4
medium
residues 254-375
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00941.28 best | FAD_binding_5 | 112.1 | 3.60e-32 | 95.9% | 68.8% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w3sA04 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.96 | 87.0 | 9.00e-01 | 93.4% | 100.0% |
| 4zohB02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.93 | 81.0 | 8.57e-01 | 91.8% | 100.0% |
| 2e1qC04 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.93 | 86.0 | 8.37e-01 | 95.9% | 99.2% |
| 1t3qC02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.92 | 84.0 | 8.56e-01 | 95.1% | 100.0% |
| 1ffvC03 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.92 | 81.0 | 8.41e-01 | 91.8% | 100.0% |
| 2gqtA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.74 | 58.0 | 5.90e-01 | 92.6% | 83.5% |
| 1hskA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.71 | 58.0 | 5.77e-01 | 92.6% | 83.5% |
| 5jzxD02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.71 | 58.0 | 5.51e-01 | 95.1% | 74.0% |
| 4pytA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.70 | 58.0 | 5.72e-01 | 93.4% | 84.4% |
| 4i2oA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 30.0 | 3.10e-01 | 89.3% | 55.1% |
| 4il7A00 | 2.60.120.1300 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 31.0 | 3.64e-01 | 81.1% | 83.5% |
| 1x5aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 33.0 | 3.72e-01 | 78.7% | 83.5% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3970971 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.98 | 93.0 | 7.90e-01 | 99.2% | 66.1% |
| 3334173 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.95 | 88.0 | 7.21e-01 | 95.9% | 65.0% |
| 1734642 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.93 | 85.0 | 7.40e-01 | 96.7% | 67.6% |
| 4982667 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.92 | 85.0 | 7.44e-01 | 95.9% | 70.0% |
| 4983769 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.92 | 88.0 | 7.46e-01 | 98.4% | 66.7% |
| 3509503 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.92 | 81.0 | 6.64e-01 | 95.1% | 55.5% |
| 4944194 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.92 | 84.0 | 7.19e-01 | 95.1% | 65.0% |
| 3920594 | 217.1.1.0 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain | 0.92 | 87.0 | 5.68e-01 | 98.4% | 29.9% |
| 3640344 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.92 | 88.0 | 6.73e-01 | 100.0% | 55.5% |
| 3962951 | 217.1.1.0 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain | 0.91 | 83.0 | 7.17e-01 | 94.3% | 71.4% |
| 5063169 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.91 | 85.0 | 7.62e-01 | 98.4% | 73.8% |
| 5061402 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.91 | 83.0 | 7.07e-01 | 95.1% | 69.7% |
| 5076492 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.91 | 87.0 | 7.38e-01 | 100.0% | 66.5% |
| 3393445 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.91 | 86.0 | 6.76e-01 | 98.4% | 59.6% |
| 3872295 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.91 | 83.0 | 6.50e-01 | 95.1% | 55.7% |
| 3928916 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.91 | 86.0 | 6.80e-01 | 99.2% | 59.6% |
| 4651264 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.91 | 85.0 | 7.30e-01 | 98.4% | 69.4% |
| 4007558 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.91 | 85.0 | 7.47e-01 | 98.4% | 71.2% |
| 3288993 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.90 | 86.0 | 7.45e-01 | 100.0% | 69.1% |
| 4961681 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.90 | 83.0 | 7.28e-01 | 95.9% | 70.0% |
| 3290403 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.90 | 83.0 | 6.90e-01 | 95.9% | 73.3% |
| 7151 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.90 | 86.0 | 7.38e-01 | 99.2% | 68.4% |
| 7154 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.90 | 85.0 | 7.36e-01 | 100.0% | 68.8% |
| 5062797 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.90 | 84.0 | 7.01e-01 | 98.4% | 72.8% |
| 5059788 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.89 | 82.0 | 7.25e-01 | 95.9% | 72.7% |
| 80896 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.89 | 83.0 | 6.68e-01 | 98.4% | 74.5% |
| 4155919 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.89 | 79.0 | 6.98e-01 | 96.7% | 68.5% |
| 3442440 | 217.1.1.0 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain | 0.88 | 80.0 | 5.23e-01 | 95.1% | 26.2% |
| 3760745 | 217.1.1.0 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain | 0.88 | 84.0 | 5.21e-01 | 100.0% | 23.1% |
| 3846733 | 217.1.1.0 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain | 0.88 | 84.0 | 5.45e-01 | 100.0% | 29.2% |
| 3776464 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.87 | 84.0 | 6.65e-01 | 100.0% | 59.5% |
| 4007506 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.87 | 75.0 | 6.76e-01 | 100.0% | 68.8% |
| 3241915 | 325.1.1.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like | 0.87 | 82.0 | 5.39e-01 | 98.4% | 29.1% |
| 3290050 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.87 | 83.0 | 7.03e-01 | 100.0% | 73.5% |
| 3816186 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.85 | 81.0 | 6.48e-01 | 100.0% | 59.1% |
| 4581543 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.74 | 62.0 | 5.31e-01 | 95.9% | 57.9% |
| 4663971 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.73 | 63.0 | 5.07e-01 | 96.7% | 49.8% |
| 4126179 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.72 | 62.0 | 5.21e-01 | 99.2% | 55.1% |
| 4107126 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.72 | 62.0 | 5.27e-01 | 96.7% | 57.0% |
| 4647497 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.72 | 61.0 | 5.29e-01 | 99.2% | 60.0% |
| 4301124 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.72 | 61.0 | 5.15e-01 | 95.9% | 56.4% |
| 4216870 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.72 | 61.0 | 5.20e-01 | 96.7% | 57.4% |
| 4193246 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.71 | 64.0 | 5.21e-01 | 96.7% | 80.5% |
| 4158506 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.71 | 63.0 | 5.41e-01 | 96.7% | 80.5% |
| 4553788 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.70 | 64.0 | 5.51e-01 | 99.2% | 81.1% |
| 4666687 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.70 | 62.0 | 5.16e-01 | 99.2% | 56.2% |
| 4253947 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.70 | 63.0 | 5.21e-01 | 96.7% | 77.1% |
| 4343101 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.69 | 62.0 | 5.32e-01 | 96.7% | 81.1% |
| 4037110 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.69 | 61.0 | 5.32e-01 | 96.7% | 82.7% |
| 4111205 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.69 | 61.0 | 5.22e-01 | 96.7% | 61.5% |
| 4399965 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.69 | 61.0 | 5.25e-01 | 96.7% | 81.1% |
| 4321117 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.68 | 62.0 | 5.19e-01 | 99.2% | 77.6% |
| 4158834 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.68 | 61.0 | 5.17e-01 | 96.7% | 80.0% |
| 4479193 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.68 | 60.0 | 5.13e-01 | 95.9% | 79.5% |
| 4231368 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.68 | 62.0 | 5.32e-01 | 100.0% | 82.6% |
| 4407551 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.67 | 60.0 | 5.14e-01 | 98.4% | 79.0% |
| 4003887 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.55 | 32.0 | 3.54e-01 | 88.5% | 71.0% |
| 4960962 | 10.11.1.0 ↗ | beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain | 0.54 | 33.0 | 3.86e-01 | 90.2% | 87.1% |
| 4217174 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 31.0 | 3.90e-01 | 85.2% | 100.0% |
| 153293 | 11.1.5.22 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Collagen_bind | 0.51 | 43.0 | 3.93e-01 | 99.2% | 70.5% |
| 4408833 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.50 | 34.0 | 3.61e-01 | 92.6% | 79.6% |