Back to structures

CAKLQH020000017.1__CAH1089658.1__SAMEA5780036_02523__00019

Bact-Vir

CAKLQH020000017.1__CAH1089658.1__SAMEA5780036_02523__00019

Identity

Kingdom:
phage

Quality

89.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 307-355
PDB
D2 medium residues 193-282
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08929.16 best PoNi_C 67.3 2.70e-18 98.9% 76.8%
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mqsA04 1.25.40.60 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.63 43.0 4.18e-01 90.0% 62.1%
7k7yG02 1.20.1120.10 Mainly Alpha › Up-down Bundle › "Clostridium botulinum neurotoxin B, ""coiled-coil"" domain" › "Clostridium botulinum neurotoxin b, ""coiled-coil"" domain" 0.62 52.0 3.45e-01 93.3% 54.7%
1kblA04 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.57 44.0 3.05e-01 85.6% 42.4%
3qkyA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 41.0 3.04e-01 90.0% 28.3%
2cz2A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.55 46.0 4.17e-01 93.3% 72.2%
2ii2A04 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.54 42.0 4.45e-01 91.1% 96.2%
4wnfA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 43.0 3.20e-01 91.1% 36.9%
2bvlA01 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 42.0 4.35e-01 87.8% 97.7%
4u7iA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.52 39.0 3.95e-01 82.2% 83.9%
2ifuD00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 44.0 3.19e-01 97.8% 37.0%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4298721 633.24.1.2 alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 0.63 48.0 4.87e-01 82.2% 94.4%
3286501 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 50.0 4.24e-01 87.8% 95.9%
3500715 633.24.1.2 alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 0.60 46.0 4.80e-01 82.2% 92.5%
4537370 5054.1.1.59 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 0.58 43.0 3.26e-01 78.9% 33.3%
4164636 185.1.1.5 alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Gliadin 0.57 46.0 4.27e-01 98.9% 69.6%
1148735 109.4.1.1919 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6, TPR_16, YfiO 0.56 41.0 3.04e-01 90.0% 28.3%
3937637 109.4.1.264 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RMD1-3 0.54 49.0 3.61e-01 100.0% 47.7%
3192973 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 45.0 3.36e-01 97.8% 41.2%
3592820 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.52 39.0 3.98e-01 81.1% 88.2%
3216270 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 44.0 3.44e-01 100.0% 58.6%
5057930 601.7.1.5 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › KNTase_C 0.51 37.0 3.42e-01 78.9% 72.5%