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CAKLQH020000063.1__CAH1096866.1__SAMEA5780036_04082__00013

Bact-Vir

CAKLQH020000063.1__CAH1096866.1__SAMEA5780036_04082__00013

Identity

Kingdom:
phage

Quality

90.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 33-90
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xdoD00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 48.0 3.00e-01 81.0% 51.6%
2bwnB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.65 42.0 3.04e-01 86.2% 24.5%
2wmmA02 3.30.70.3500 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MukB, hinge domain 0.65 36.0 2.87e-01 74.1% 26.5%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.64 39.0 2.69e-01 87.9% 19.1%
1ml8A01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.63 37.0 4.42e-01 81.0% 100.0%
2vqrA01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.62 55.0 3.25e-01 100.0% 63.2%
5tkwA02 3.30.420.370 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain 0.61 44.0 4.26e-01 100.0% 68.2%
1ifqB00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.61 40.0 3.17e-01 94.8% 31.2%
2czrA01 3.40.1350.70 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › TBP-interacting protein, N-terminal domain 0.60 52.0 4.27e-01 98.3% 75.5%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.59 46.0 3.51e-01 81.0% 44.5%
2lioA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 44.0 3.40e-01 81.0% 89.0%
3w1zC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 43.0 3.23e-01 75.9% 87.7%
2gx9A00 3.30.420.330 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Influenza virus non-structural protein, effector domain 0.59 43.0 3.39e-01 79.3% 74.6%
1j3wC00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.58 51.0 3.94e-01 100.0% 100.0%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 43.0 3.22e-01 100.0% 29.8%
1kz7C02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 47.0 3.53e-01 89.7% 40.9%
4phtY02 3.30.420.370 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain 0.56 46.0 4.59e-01 100.0% 85.5%
1skoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.56 44.0 3.49e-01 84.5% 100.0%
6ixwB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 47.0 3.44e-01 96.6% 90.7%
5lm7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 37.0 3.39e-01 87.9% 52.6%
4wh5A00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.55 40.0 2.91e-01 77.6% 42.4%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 48.0 4.25e-01 100.0% 78.2%
1iwlA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.55 46.0 3.37e-01 100.0% 66.7%
3ot2A00 3.90.1570.10 Alpha Beta › Alpha-Beta Complex › tt1808, chain A › tt1808, chain A 0.55 49.0 3.42e-01 100.0% 35.8%
3p34A02 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.53 45.0 3.78e-01 93.1% 67.0%
3sd2A01 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 47.0 4.24e-01 96.6% 90.9%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.53 40.0 2.58e-01 79.3% 44.9%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.53 47.0 3.28e-01 100.0% 86.7%
1w97L02 3.30.420.370 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain 0.52 45.0 4.22e-01 100.0% 86.7%
1fbnA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 36.0 3.83e-01 91.4% 86.3%
3v5nB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 42.0 2.89e-01 86.2% 86.4%
4qwoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 42.0 3.27e-01 91.4% 84.1%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.51 43.0 3.22e-01 91.4% 62.9%
2dmwA01 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.51 40.0 3.28e-01 87.9% 56.9%
5jipA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 43.0 3.77e-01 96.6% 88.9%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.50 37.0 3.14e-01 100.0% 46.1%
2w5nA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.50 40.0 2.57e-01 100.0% 67.9%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.50 39.0 2.99e-01 93.1% 98.8%
3u9sE04 3.30.700.40 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.50 35.0 2.76e-01 82.8% 34.4%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4872412 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.73 41.0 2.91e-01 96.6% 19.0%
4862553 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.70 39.0 3.23e-01 91.4% 31.0%
5014724 295.1.1.51 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C 0.70 47.0 3.96e-01 70.7% 89.0%
3894967 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.70 55.0 3.83e-01 84.5% 66.5%
3692982 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.66 54.0 3.38e-01 89.7% 45.1%
3774120 4320.1.1.1 alpha superhelices › Taf5 N-terminal domain-like › Taf5 N-terminal domain-like › Taf5 N-terminal domain-like › TFIID_NTD2 0.65 46.0 3.05e-01 94.8% 18.7%
5017090 318.1.1.0 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.65 49.0 4.39e-01 81.0% 96.2%
5077594 56.2.1.1 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.64 39.0 4.05e-01 94.8% 65.5%
4108899 3239.1.1.1 alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.64 49.0 3.06e-01 82.8% 18.3%
4945229 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 43.0 3.42e-01 72.4% 100.0%
3545459 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.63 57.0 3.87e-01 100.0% 55.5%
3180612 2003.1.2.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.62 51.0 3.09e-01 91.4% 58.3%
3540021 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.62 56.0 3.80e-01 100.0% 56.4%
3388895 220.1.1.170 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin 0.61 43.0 3.56e-01 96.6% 39.1%
5058747 56.2.1.1 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.61 38.0 3.87e-01 94.8% 63.8%
2516891 2002.1.1.134 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 0.61 49.0 3.01e-01 87.9% 31.7%
3798012 883.1.1.2 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.61 49.0 3.21e-01 87.9% 59.6%
4945660 230.1.1.3 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.61 43.0 3.17e-01 100.0% 28.7%
3911662 633.23.1.1 alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.61 55.0 3.72e-01 100.0% 52.7%
5046979 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 47.0 3.78e-01 82.8% 87.3%
3703580 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.61 49.0 3.53e-01 86.2% 68.4%
5065002 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.60 53.0 4.12e-01 98.3% 100.0%
4946458 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 42.0 3.27e-01 98.3% 32.6%
4477006 874.1.1.2 a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain › MukB_hinge 0.60 53.0 3.14e-01 98.3% 38.8%
3175310 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 52.0 3.62e-01 100.0% 37.9%
4110937 874.1.1.2 a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain › MukB_hinge 0.59 54.0 3.79e-01 100.0% 94.7%
4537639 874.1.1.0 a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain 0.59 54.0 3.12e-01 100.0% 32.2%
4124640 874.1.1.2 a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain › MukB_hinge 0.59 52.0 3.32e-01 98.3% 55.4%
4987919 56.2.1.1 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.59 38.0 3.87e-01 96.6% 65.5%
3228787 4161.1.1.0 beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like 0.58 48.0 3.06e-01 93.1% 37.8%
4972248 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 50.0 3.74e-01 91.4% 76.9%
4978622 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 48.0 3.91e-01 87.9% 81.0%
4000169 4161.1.1.0 beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like 0.58 48.0 3.14e-01 93.1% 45.4%
2309 4161.1.1.2 beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC_N 0.58 48.0 3.73e-01 93.1% 80.5%
3595869 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.57 42.0 3.59e-01 79.3% 70.5%
3702784 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.57 42.0 3.52e-01 79.3% 64.0%
5045959 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 43.0 3.49e-01 98.3% 42.7%
4314521 1.1.1.19 beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.57 35.0 2.81e-01 84.5% 30.4%
5071886 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.56 43.0 3.84e-01 100.0% 58.7%
4429302 4161.1.1.0 beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like 0.56 47.0 2.98e-01 93.1% 38.6%
3847907 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.56 41.0 3.51e-01 79.3% 65.3%
5077660 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 46.0 3.38e-01 89.7% 64.7%
3543169 319.1.1.5 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PIH1_CS 0.55 42.0 3.70e-01 100.0% 56.5%
3461881 223.2.1.15 a+b three layers › Profilin-like › profilin-like › profilin-like › Longin 0.55 43.0 3.32e-01 82.8% 80.8%
4947581 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 44.0 3.55e-01 87.9% 76.4%
5045350 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 45.0 3.50e-01 91.4% 73.8%
4964699 220.1.1.219 beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.54 48.0 4.04e-01 100.0% 83.0%
5048715 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 47.0 3.55e-01 100.0% 90.3%
3388925 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.54 40.0 3.40e-01 100.0% 48.4%
3788105 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.54 46.0 3.08e-01 98.3% 33.2%
4960002 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 47.0 4.06e-01 98.3% 70.0%
3517718 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.53 40.0 3.20e-01 81.0% 62.6%
5052872 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 44.0 3.44e-01 98.3% 41.9%
3680747 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 44.0 2.61e-01 91.4% 28.9%
2629648 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.53 41.0 3.53e-01 84.5% 68.5%
5072591 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 43.0 3.44e-01 89.7% 77.4%
3964178 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.52 44.0 3.41e-01 96.6% 90.4%
4969673 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 44.0 2.85e-01 100.0% 32.0%
1176501 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 41.0 3.57e-01 100.0% 58.1%
3783021 719.1.1.2 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.51 42.0 3.47e-01 98.3% 65.0%
5034142 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 42.0 2.62e-01 100.0% 78.7%
3987859 101.1.2.584 alpha arrays › HTH › HTH › winged helix domain › HrcA 0.51 41.0 3.42e-01 93.1% 90.9%
4948490 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 42.0 3.93e-01 100.0% 73.3%
5752 230.1.1.3 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.51 39.0 3.01e-01 93.1% 98.8%
4974879 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.51 39.0 2.97e-01 91.4% 84.8%
3220737 207.1.1.52 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.51 41.0 2.71e-01 96.6% 23.3%