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CAKLQH020000071.1__CAH1097181.1__SAMEA5780036_04147__00005
Bact-VirCAKLQH020000071.1__CAH1097181.1__SAMEA5780036_04147__00005
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-63
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.83 | 67.0 | 5.47e-01 | 88.9% | 47.9% |
| 2kp8A00 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.83 | 72.0 | 6.85e-01 | 93.7% | 90.3% |
| 7p3rA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.82 | 75.0 | 4.63e-01 | 98.4% | 25.5% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.80 | 65.0 | 5.34e-01 | 92.1% | 50.5% |
| 2zxeA02 | 1.20.1110.10 | Mainly Alpha › Up-down Bundle › Calcium-transporting ATPase, transmembrane domain › Calcium-transporting ATPase, transmembrane domain | 0.77 | 64.0 | 3.84e-01 | 96.8% | 13.9% |
| 3iylU02 | 1.10.287.1520 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 59.0 | 6.28e-01 | 84.1% | 100.0% |
| 2zm5B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 52.0 | 3.51e-01 | 79.4% | 76.5% |
| 6kd7A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.66 | 58.0 | 3.59e-01 | 95.2% | 45.0% |
| 1o7dC01 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.61 | 43.0 | 4.44e-01 | 92.1% | 78.7% |
| 1y74A00 | 1.10.287.650 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain | 0.58 | 41.0 | 4.23e-01 | 77.8% | 93.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5043880 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.88 | 65.0 | 5.80e-01 | 77.8% | 57.6% |
| 5048976 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.85 | 77.0 | 5.71e-01 | 100.0% | 42.1% |
| None | — | 0.83 | 63.0 | 4.04e-01 | 90.5% | 18.2% | |
| 3975665 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.80 | 72.0 | 4.28e-01 | 100.0% | 83.1% |
| 3348367 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.76 | 60.0 | 3.61e-01 | 85.7% | 12.8% |
| 3386973 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.76 | 67.0 | 5.95e-01 | 98.4% | 68.9% |
| 3506288 | 4177.1.1.6 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3_WASP_bdg | 0.70 | 62.0 | 4.30e-01 | 100.0% | 84.6% |
| 4126680 | 109.4.1.681 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 | 0.68 | 56.0 | 3.37e-01 | 87.3% | 34.6% |
| 4149728 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.67 | 49.0 | 4.58e-01 | 85.7% | 62.5% |
| 3194364 | 109.4.1.681 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 | 0.58 | 52.0 | 3.08e-01 | 96.8% | 62.5% |
D2
medium
residues 112-294
Domain cluster:
rep: OQ417966.1__WJJ55912.1__PROPHIT361_108__00108__D15-81_130-142_243-343
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00005.34 best | ABC_tran | 119.8 | 1.90e-34 | 80.3% | 94.2% |