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CAKLQH020000090.1__CAH1097709.1__SAMEA5780036_04221__00001
Bact-VirCAKLQH020000090.1__CAH1097709.1__SAMEA5780036_04221__00001
Identity
- Kingdom:
- phage
Quality
71.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 436-596
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.54 | 39.0 | 4.04e-01 | 95.0% | 79.2% |
| 1t5rB00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.51 | 37.0 | 3.07e-01 | 94.4% | 42.8% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.51 | 36.0 | 4.03e-01 | 85.7% | 93.5% |
| 1lyvA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 37.0 | 3.12e-01 | 88.2% | 42.8% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3239880 | 4099.1.1.29 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29306 | 0.63 | 41.0 | 4.41e-01 | 99.4% | 77.8% |
| 3508100 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.61 | 46.0 | 4.89e-01 | 100.0% | 89.3% |
| 3412971 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.60 | 40.0 | 4.66e-01 | 100.0% | 97.3% |
| 3589805 | 243.8.1.0 ↗ | a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein | 0.57 | 34.0 | 4.32e-01 | 83.2% | 100.0% |
| 3272624 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.54 | 33.0 | 3.60e-01 | 70.8% | 72.3% |
| 4670897 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.54 | 39.0 | 4.20e-01 | 94.4% | 86.4% |
D2
medium
residues 4-94_110-159
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k75A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 34.0 | 3.94e-01 | 85.8% | 64.1% |
| 3irbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 31.0 | 4.23e-01 | 82.3% | 92.6% |
| 3kojB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 34.0 | 4.21e-01 | 85.1% | 85.6% |
| 4owwB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 40.0 | 4.59e-01 | 86.5% | 90.7% |
| 2vl6A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 37.0 | 4.09e-01 | 85.8% | 79.5% |
| 4jbmB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 38.0 | 4.45e-01 | 86.5% | 100.0% |
| 1o7iB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 39.0 | 4.25e-01 | 81.6% | 90.4% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5030410 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.69 | 37.0 | 4.41e-01 | 85.8% | 75.8% |
| 4978172 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.67 | 36.0 | 4.27e-01 | 85.8% | 76.8% |
| 5069068 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 35.0 | 4.27e-01 | 85.1% | 77.7% |
| 3289386 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 36.0 | 4.40e-01 | 82.3% | 87.5% |
| 3268888 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.60 | 33.0 | 4.03e-01 | 82.3% | 82.2% |
| 3598329 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 36.0 | 3.83e-01 | 86.5% | 66.4% |
| 3285634 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 36.0 | 4.40e-01 | 84.4% | 93.3% |
| 4004698 | 2.1.1.135 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 | 0.60 | 32.0 | 4.25e-01 | 81.6% | 97.3% |
| 4980055 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.58 | 40.0 | 4.50e-01 | 78.7% | 90.0% |
| 5046188 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 31.0 | 3.96e-01 | 82.3% | 93.3% |
| 3281968 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 35.0 | 4.15e-01 | 84.4% | 88.4% |
| 5078956 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.58 | 40.0 | 4.44e-01 | 78.7% | 90.0% |
| 4997227 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.57 | 40.0 | 4.32e-01 | 86.5% | 84.2% |
| 3710314 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 36.0 | 3.56e-01 | 86.5% | 60.7% |
| 3702502 | 2.1.1.25 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 | 0.55 | 33.0 | 3.77e-01 | 85.8% | 81.0% |
| 4137219 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.55 | 34.0 | 4.01e-01 | 85.1% | 88.0% |
| 3601108 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 32.0 | 3.66e-01 | 85.8% | 78.1% |
| 5074460 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 32.0 | 3.60e-01 | 85.1% | 77.1% |
| 4929844 | 2.1.1.135 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 | 0.54 | 33.0 | 4.04e-01 | 81.6% | 95.6% |
| 4165771 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.53 | 40.0 | 4.10e-01 | 78.0% | 88.9% |
| 3716770 | 2.1.1.135 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 | 0.53 | 31.0 | 3.53e-01 | 84.4% | 76.2% |
| 3412139 | 2.1.1.176 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_MEIOB_N | 0.53 | 38.0 | 3.82e-01 | 75.2% | 88.3% |
| 4336471 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.52 | 33.0 | 3.84e-01 | 85.8% | 90.0% |
| 5069581 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 36.0 | 3.97e-01 | 70.2% | 90.0% |
| 3642408 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 43.0 | 4.35e-01 | 90.8% | 88.3% |
| 3996060 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.51 | 41.0 | 4.15e-01 | 85.1% | 86.4% |
| 3593482 | 2.1.1.135 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 | 0.51 | 33.0 | 3.84e-01 | 81.6% | 92.0% |
| 3673251 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.50 | 39.0 | 3.65e-01 | 82.3% | 91.4% |
| 3669519 | 2.1.1.105 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NMD3_OB | 0.50 | 33.0 | 3.85e-01 | 85.8% | 97.9% |
D3
medium
residues 95-109_160-326_366-383
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kbnA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 28.0 | 3.67e-01 | 85.5% | 75.2% |
| 3tr3A00 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.61 | 23.0 | 3.57e-01 | 73.5% | 85.7% |
| 4g1iA03 | 3.30.70.1770 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 21.0 | 3.32e-01 | 73.0% | 84.1% |
| 5xyiD01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.59 | 23.0 | 3.38e-01 | 73.5% | 77.5% |
| 1v1pB02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 24.0 | 3.72e-01 | 83.5% | 100.0% |
| 4hlbA00 | 3.30.70.2960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 25.0 | 3.62e-01 | 70.5% | 86.3% |
| 4bpeC01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.56 | 23.0 | 3.23e-01 | 73.5% | 76.1% |
| 5o5jC01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.56 | 22.0 | 3.15e-01 | 73.5% | 74.4% |
| 3en2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 26.0 | 3.88e-01 | 94.0% | 98.9% |
| 6vhvA01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.55 | 22.0 | 3.11e-01 | 84.0% | 75.3% |
| 4aibA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.52 | 26.0 | 3.26e-01 | 79.5% | 77.0% |
| 7r7eA01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.52 | 26.0 | 3.34e-01 | 73.0% | 81.5% |
| 2kdnA00 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.50 | 22.0 | 2.89e-01 | 74.0% | 71.3% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4478346 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.64 | 24.0 | 3.94e-01 | 73.5% | 95.7% |
| 3439658 | 327.10.1.9 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N-like_STI | 0.62 | 23.0 | 3.65e-01 | 70.0% | 86.7% |
| 4410660 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.62 | 23.0 | 3.33e-01 | 73.5% | 72.2% |
| 4626207 | 327.2.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like › BolA | 0.61 | 23.0 | 3.65e-01 | 73.0% | 86.3% |
| 4176696 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.59 | 22.0 | 3.35e-01 | 73.0% | 80.0% |
| 5037058 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.59 | 23.0 | 3.43e-01 | 73.5% | 83.7% |
| 3496374 | 327.18.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A | 0.59 | 23.0 | 3.28e-01 | 82.5% | 72.6% |
| 4458088 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.58 | 22.0 | 3.37e-01 | 73.0% | 82.5% |
| 4994554 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.58 | 23.0 | 3.27e-01 | 74.0% | 75.6% |
| 3495118 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.58 | 24.0 | 3.42e-01 | 73.5% | 82.4% |
| 5028639 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.58 | 23.0 | 3.42e-01 | 73.5% | 85.0% |
| 4243900 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.58 | 23.0 | 3.07e-01 | 73.5% | 65.7% |
| 221616 | 327.7.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › DUF6981 | 0.57 | 25.0 | 3.62e-01 | 70.5% | 86.3% |
| 4086038 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.57 | 22.0 | 3.33e-01 | 73.0% | 83.7% |
| 4951889 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.57 | 22.0 | 3.33e-01 | 73.0% | 85.0% |
| 5023294 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.56 | 22.0 | 3.26e-01 | 73.5% | 81.2% |
| 3989471 | 327.11.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KhpA-B_KH | 0.54 | 21.0 | 3.22e-01 | 71.5% | 86.3% |
| 4577304 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.54 | 24.0 | 3.35e-01 | 73.5% | 86.7% |
| 4382942 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.54 | 24.0 | 3.46e-01 | 74.0% | 91.1% |
| 4953262 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.53 | 20.0 | 3.06e-01 | 72.5% | 82.5% |
| 4668748 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.53 | 23.0 | 3.29e-01 | 73.5% | 87.8% |
| 3956580 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.53 | 23.0 | 3.06e-01 | 70.0% | 73.6% |
| 3739731 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.52 | 23.0 | 3.15e-01 | 71.5% | 80.0% |
| 3306268 | 327.5.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-dom_DIP2-like | 0.51 | 25.0 | 3.03e-01 | 73.0% | 67.1% |
| 3603362 | 327.3.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain | 0.51 | 20.0 | 3.21e-01 | 84.5% | 100.0% |
| 3955921 | 327.5.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-dom_DIP2-like | 0.51 | 24.0 | 3.17e-01 | 72.5% | 80.0% |