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CC-chemokine_family_protein

Euk-Vir

Flamingopox_virus_FGPVKD09

CC-chemokine_family_protein__YP_009447977__Flamingopox_virus_FGPVKD09__2059380

Identity

Accession:
YP_009447977 ↗
Protein ID:
CC-chemokine_family_protein
Kingdom:
euk

Quality

72.4 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Avipoxvirus› Flamingopox_virus_FGPVKD09

TaxID: 2059380

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-90
PDB
D2 high residues 102-190
PDB
Domain cluster: rep: CC-chemokine_family_protein__YP_009447979__Flamingopox_virus_FGPVKD09__2059380__D110-194
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17614.8 best FPV060 172.5 9.60e-51 98.9% 46.8%
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zxtA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.77 50.0 5.83e-01 80.9% 96.7%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.76 52.0 5.94e-01 82.0% 95.5%
4oijA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.76 51.0 5.58e-01 83.1% 85.9%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.75 51.0 5.82e-01 83.1% 94.0%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.74 49.0 5.63e-01 75.3% 93.8%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 50.0 5.71e-01 78.7% 95.5%
1eotA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 51.0 5.50e-01 80.9% 86.5%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 50.0 5.70e-01 80.9% 95.5%
5wb2B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 49.0 5.34e-01 82.0% 84.9%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 52.0 5.69e-01 91.0% 91.8%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 50.0 5.59e-01 86.5% 95.5%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 41.0 4.92e-01 77.5% 100.0%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 37.0 4.02e-01 71.9% 68.1%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 44.0 4.10e-01 71.9% 76.1%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 43.0 4.17e-01 75.3% 79.4%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.58 38.0 4.49e-01 94.4% 100.0%
3e18A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 41.0 3.12e-01 74.2% 88.2%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.57 41.0 3.95e-01 76.4% 92.3%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 40.0 4.13e-01 74.2% 89.5%
1dbhA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 38.0 3.43e-01 71.9% 74.2%
1v61A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 38.0 3.42e-01 75.3% 67.4%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 40.0 2.90e-01 82.0% 100.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 36.0 4.14e-01 93.3% 100.0%
1ihjA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.52 36.0 3.62e-01 74.2% 91.5%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.51 40.0 3.65e-01 85.4% 91.9%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 35.0 3.88e-01 71.9% 93.0%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3896688 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.82 53.0 6.38e-01 83.1% 98.3%
3856611 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.82 52.0 6.13e-01 77.5% 92.1%
3894506 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.79 53.0 5.97e-01 83.1% 88.6%
3541613 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.79 53.0 5.95e-01 83.1% 89.7%
3842884 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.78 52.0 5.91e-01 84.3% 89.7%
3912274 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.78 52.0 5.82e-01 79.8% 87.1%
3556735 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.78 53.0 5.75e-01 83.1% 84.9%
665 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.76 52.0 5.86e-01 82.0% 92.5%
4813310 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.75 52.0 5.94e-01 82.0% 95.5%
3764537 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.75 52.0 5.48e-01 82.0% 80.0%
3915693 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.75 50.0 5.79e-01 71.9% 95.4%
3880422 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.74 50.0 5.56e-01 79.8% 89.7%
3894564 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.73 52.0 5.41e-01 84.3% 79.5%
1032344 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.73 49.0 5.17e-01 75.3% 76.5%
2388239 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.72 49.0 5.34e-01 82.0% 84.9%
1700100 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.72 48.0 5.66e-01 74.2% 100.0%
1094905 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.71 50.0 5.49e-01 86.5% 91.4%
4932378 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 40.0 4.67e-01 73.0% 86.7%
4208450 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 39.0 4.51e-01 73.0% 88.3%
4315771 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.64 39.0 4.40e-01 73.0% 83.1%
5054268 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.63 40.0 4.53e-01 77.5% 86.2%
5035086 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.63 39.0 4.63e-01 77.5% 93.3%
4461475 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 39.0 4.37e-01 73.0% 81.4%
5028066 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.61 38.0 4.39e-01 73.0% 86.2%
3941152 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.61 43.0 4.85e-01 74.2% 100.0%
3263647 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 44.0 4.03e-01 76.4% 73.3%
4149372 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 39.0 4.42e-01 77.5% 87.7%
4928706 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.60 39.0 4.32e-01 73.0% 84.3%
4071167 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 39.0 4.32e-01 73.0% 85.7%
3939881 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 40.0 4.32e-01 70.8% 88.0%
3255344 220.1.1.27 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD 0.58 43.0 3.87e-01 76.4% 93.3%
3861438 220.1.1.174 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Cybc1_Eros 0.58 40.0 3.63e-01 70.8% 81.7%
4973274 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.58 36.0 4.27e-01 74.2% 100.0%
4341478 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.57 43.0 4.39e-01 80.9% 83.5%
2642946 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.57 38.0 3.82e-01 73.0% 67.0%
4945674 2.1.1.252 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2_C 0.57 39.0 4.30e-01 75.3% 90.0%
4053455 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.56 37.0 4.09e-01 74.2% 85.7%
4940372 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.56 38.0 4.22e-01 75.3% 90.0%
4598956 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 41.0 3.94e-01 78.7% 85.7%
4504508 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.56 42.0 4.32e-01 86.5% 84.7%
4160115 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.55 42.0 3.80e-01 83.1% 72.8%
4602962 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.54 43.0 3.66e-01 86.5% 70.0%
4983184 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 35.0 4.09e-01 74.2% 98.3%
4236717 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.53 35.0 3.21e-01 70.8% 50.0%
3550157 220.1.1.164 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26089 0.51 36.0 2.89e-01 74.2% 63.2%