Back to structures

CC-chemokine_family_protein

Euk-Vir

Flamingopox_virus_FGPVKD09

CC-chemokine_family_protein__YP_009447978__Flamingopox_virus_FGPVKD09__2059380

Identity

Accession:
YP_009447978 ↗
Protein ID:
CC-chemokine_family_protein
Kingdom:
euk

Quality

64.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-112
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5wb2B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.77 53.0 5.47e-01 75.9% 76.7%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.74 51.0 5.36e-01 74.7% 78.1%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 51.0 5.51e-01 75.9% 86.4%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 50.0 5.42e-01 75.9% 85.1%
4oijA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 50.0 5.27e-01 77.2% 81.7%
1eotA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 51.0 5.27e-01 77.2% 79.7%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 49.0 5.34e-01 75.9% 87.9%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 52.0 5.62e-01 78.5% 95.5%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 50.0 5.44e-01 75.9% 90.9%
1zxtA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 48.0 5.39e-01 77.2% 95.1%
2mp1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 49.0 4.98e-01 75.9% 76.6%
2hdlA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 47.0 4.81e-01 73.4% 88.3%
1ha6A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 50.0 5.26e-01 79.7% 91.4%
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 47.0 5.02e-01 79.7% 86.6%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 46.0 5.04e-01 92.4% 89.1%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 38.0 4.24e-01 75.9% 76.7%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.61 43.0 4.64e-01 81.0% 89.4%
2k0mA00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 35.0 3.17e-01 82.3% 42.3%
2d9vA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 42.0 3.81e-01 74.7% 88.9%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 38.0 4.45e-01 78.5% 94.6%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 42.0 3.75e-01 74.7% 74.3%
1faoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 41.0 3.85e-01 74.7% 86.0%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 36.0 3.46e-01 72.2% 52.7%
1hyuA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 47.0 3.74e-01 97.5% 85.2%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 48.0 3.49e-01 97.5% 88.3%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 35.0 3.78e-01 73.4% 74.6%
4p5nA00 2.30.30.1060 Mainly Beta › Roll › SH3 type barrels. › 0.56 39.0 4.01e-01 83.5% 77.0%
3dmeA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 47.0 3.48e-01 94.9% 90.6%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.55 37.0 4.07e-01 72.2% 87.3%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 39.0 3.69e-01 74.7% 88.4%
5ttjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 47.0 3.48e-01 98.7% 88.7%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 47.0 3.75e-01 98.7% 97.6%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 39.0 3.86e-01 77.2% 90.8%
3tfmA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 37.0 3.54e-01 73.4% 88.9%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 38.0 3.70e-01 73.4% 87.2%
1b37A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 44.0 3.12e-01 89.9% 95.9%
4pz6A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.53 41.0 3.02e-01 86.1% 77.1%
3luuA00 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.53 40.0 3.89e-01 81.0% 82.0%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 36.0 3.06e-01 72.2% 73.1%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2388239 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.77 53.0 5.47e-01 75.9% 76.7%
3889621 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.76 51.0 5.81e-01 74.7% 91.7%
3894506 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.76 53.0 5.58e-01 75.9% 81.4%
3541613 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.75 52.0 5.59e-01 75.9% 83.8%
3856611 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.75 50.0 5.50e-01 72.2% 85.7%
3880422 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.75 52.0 5.56e-01 75.9% 83.8%
3896688 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.74 51.0 5.79e-01 74.7% 95.0%
3878850 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.73 52.0 5.40e-01 75.9% 78.7%
665 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.73 51.0 5.48e-01 75.9% 85.1%
4424678 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.72 52.0 5.65e-01 75.9% 90.8%
3842884 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.72 52.0 5.53e-01 77.2% 86.8%
3898211 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.72 52.0 5.35e-01 75.9% 79.7%
4813310 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.72 50.0 5.37e-01 75.9% 85.1%
3894564 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.72 52.0 5.11e-01 75.9% 71.1%
3764537 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.72 51.0 5.10e-01 75.9% 72.5%
3912274 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.72 51.0 5.38e-01 75.9% 82.9%
3556735 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.72 51.0 5.32e-01 77.2% 80.8%
3761120 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.71 50.0 5.49e-01 75.9% 89.2%
3918073 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.71 51.0 5.39e-01 75.9% 85.7%
3911547 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.70 51.0 4.97e-01 75.9% 71.8%
1032344 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.69 49.0 4.93e-01 75.9% 72.8%
3891033 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.68 51.0 5.29e-01 78.5% 87.7%
3859059 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.68 49.0 4.74e-01 75.9% 66.7%
1094905 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.68 52.0 5.49e-01 81.0% 95.7%
3890480 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.67 49.0 5.02e-01 75.9% 81.3%
1700100 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.66 46.0 5.15e-01 92.4% 93.4%
3869511 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.66 48.0 4.49e-01 81.0% 63.2%
3899072 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.64 48.0 5.07e-01 79.7% 88.6%
3915693 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.63 47.0 5.13e-01 79.7% 95.4%
3939881 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.61 46.0 4.71e-01 79.7% 84.0%
3402011 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 43.0 4.04e-01 74.7% 88.0%
3788477 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 43.0 3.80e-01 74.7% 81.7%
None 0.60 54.0 3.68e-01 100.0% 83.3%
3717655 220.1.1.30 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.59 42.0 3.92e-01 74.7% 89.0%
3562842 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 42.0 3.67e-01 74.7% 71.7%
3591463 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.59 42.0 3.71e-01 74.7% 68.7%
3570692 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.59 42.0 3.70e-01 74.7% 73.9%
3248246 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 46.0 3.96e-01 86.1% 83.8%
3626366 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 43.0 3.85e-01 77.2% 89.1%
3174988 220.1.1.30 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.59 42.0 3.43e-01 74.7% 82.8%
3699518 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.59 42.0 3.59e-01 74.7% 63.2%
2701381 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.59 41.0 3.58e-01 73.4% 99.2%
4506574 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.59 51.0 3.60e-01 98.7% 94.6%
3913573 220.1.1.30 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.59 41.0 3.58e-01 73.4% 78.3%
3411942 220.1.1.58 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.58 42.0 3.52e-01 74.7% 64.6%
3903728 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 41.0 3.86e-01 74.7% 83.0%
3574144 220.1.1.30 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.58 40.0 4.35e-01 70.9% 87.7%
3583844 220.1.1.30 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.58 42.0 3.39e-01 75.9% 80.0%
3742004 220.1.1.30 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.58 42.0 3.58e-01 75.9% 80.0%
3252821 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 41.0 3.67e-01 74.7% 71.8%
3253113 220.1.1.30 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.57 41.0 3.64e-01 75.9% 71.3%
3483205 220.1.1.58 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.57 40.0 3.49e-01 74.7% 68.0%
3206439 220.1.1.30 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.57 41.0 3.28e-01 75.9% 77.5%
3422909 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.57 48.0 3.47e-01 92.4% 62.2%
4883390 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.57 40.0 3.08e-01 74.7% 81.6%
3743938 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 40.0 3.40e-01 74.7% 69.2%
3570527 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 40.0 3.40e-01 74.7% 66.9%
3469923 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 40.0 3.81e-01 74.7% 92.6%
3253063 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.56 40.0 3.52e-01 73.4% 73.0%
989 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.56 40.0 3.63e-01 74.7% 78.7%
3908519 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 40.0 3.44e-01 74.7% 68.0%
3574847 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.56 39.0 3.24e-01 74.7% 75.2%
3627615 220.1.1.58 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.56 39.0 3.24e-01 74.7% 57.9%
3801512 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 39.0 3.44e-01 74.7% 70.0%
3222570 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 41.0 3.67e-01 79.7% 87.0%
3530259 220.1.1.30 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.55 41.0 3.66e-01 79.7% 80.9%
3653284 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.55 40.0 3.71e-01 78.5% 80.0%
3429270 5.1.5.93 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N 0.55 42.0 2.60e-01 83.5% 76.5%
3742330 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.55 38.0 3.40e-01 73.4% 73.9%
3264240 220.1.1.30 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.54 38.0 3.31e-01 73.4% 84.0%
3472026 220.1.1.27 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD 0.54 40.0 3.51e-01 79.7% 85.0%
5066039 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.53 42.0 2.60e-01 87.3% 20.8%
4385005 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 37.0 3.49e-01 74.7% 97.9%
3899369 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.52 45.0 3.68e-01 98.7% 76.0%
3591209 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 35.0 3.94e-01 72.2% 93.3%
3578602 535.1.1.0 alpha arrays › BEACH domain › BEACH domain › BEACH domain 0.51 44.0 3.42e-01 100.0% 63.7%
3255344 220.1.1.27 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD 0.51 40.0 3.55e-01 87.3% 91.7%
3263647 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 43.0 3.86e-01 100.0% 96.7%
3263649 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 40.0 3.42e-01 87.3% 69.2%