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CC_chemokine_Mo8

Euk-Vir

Beluga_whale_alphaherpesvirus_1

CC_chemokine_Mo8__YP_010084989__Beluga_whale_alphaherpesvirus_1__1434720

Identity

Accession:
YP_010084989 ↗
Protein ID:
CC_chemokine_Mo8
Kingdom:
euk

Quality

74.5 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Beluga_whale_alphaherpesvirus_1

TaxID: 1434720

Cluster

View cluster (24 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-113
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00048.26 best IL8 46.9 3.60e-12 80.5% 90.0%
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zxtA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.93 66.0 7.45e-01 81.8% 93.4%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.93 69.0 7.37e-01 84.4% 88.1%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.91 69.0 7.50e-01 85.7% 92.4%
4oijA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.90 67.0 6.96e-01 84.4% 83.1%
5wb2B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.85 63.0 6.45e-01 85.7% 80.8%
2mp1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.80 63.0 6.31e-01 98.7% 83.1%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.80 57.0 6.13e-01 85.7% 87.9%
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.75 54.0 5.76e-01 87.0% 88.1%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 54.0 5.79e-01 84.4% 95.3%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 48.0 4.25e-01 75.3% 88.7%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 38.0 4.14e-01 71.4% 69.8%
1lv9A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 43.0 4.63e-01 85.7% 93.8%
3iutA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 46.0 3.37e-01 94.8% 29.8%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 35.0 3.84e-01 74.0% 69.8%
3aqoA02 3.30.1360.200 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.60 42.0 3.47e-01 74.0% 85.8%
1sp4B00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.59 46.0 3.37e-01 93.5% 31.7%
3bdrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 38.0 3.08e-01 70.1% 50.6%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 46.0 4.44e-01 90.9% 92.0%
1jqpA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 45.0 3.23e-01 94.8% 29.8%
1na6A01 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.55 38.0 3.09e-01 74.0% 98.2%
1faoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 45.0 4.19e-01 96.1% 86.0%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 45.0 3.70e-01 100.0% 76.6%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 45.0 4.22e-01 96.1% 89.5%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.52 41.0 3.73e-01 84.4% 92.2%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 43.0 4.19e-01 92.2% 88.4%
5egjA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 35.0 2.82e-01 71.4% 64.7%
1vw3B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 44.0 4.17e-01 97.4% 92.5%
1a0iA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 34.0 3.21e-01 71.4% 100.0%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.51 43.0 3.56e-01 98.7% 83.9%
4ioyX02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 40.0 3.59e-01 90.9% 72.2%
1udxA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 41.0 3.23e-01 92.2% 87.4%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3889621 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.95 67.0 7.56e-01 81.8% 93.3%
3896688 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.94 67.0 7.62e-01 88.3% 95.0%
3880422 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.94 66.0 7.05e-01 80.5% 82.4%
3912274 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.93 66.0 6.93e-01 80.5% 80.0%
3541613 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.93 69.0 7.37e-01 84.4% 86.8%
3856611 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.92 71.0 7.81e-01 85.7% 96.8%
3894506 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.91 69.0 7.30e-01 85.7% 87.1%
4813310 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.91 68.0 7.35e-01 84.4% 89.6%
665 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.91 69.0 7.44e-01 85.7% 91.0%
3761120 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.90 69.0 7.48e-01 85.7% 93.8%
3842884 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.90 68.0 7.29e-01 84.4% 89.7%
2388239 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.85 63.0 6.45e-01 85.7% 80.8%
136515 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.74 54.0 5.67e-01 87.0% 86.8%
3912173 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.72 57.0 5.71e-01 85.7% 86.3%
4507316 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.67 47.0 4.19e-01 75.3% 81.7%
4309550 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.66 47.0 2.96e-01 75.3% 48.9%
3631248 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.66 47.0 4.03e-01 75.3% 84.0%
3269121 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.66 47.0 4.25e-01 76.6% 82.7%
3739683 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.64 46.0 4.11e-01 75.3% 81.8%
989 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.62 45.0 4.08e-01 77.9% 77.8%
4023434 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 45.0 3.72e-01 77.9% 77.9%
3971736 1.1.5.44 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head 0.62 42.0 3.64e-01 70.1% 77.5%
3183690 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 48.0 3.88e-01 85.7% 80.7%
4681738 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.60 53.0 4.16e-01 100.0% 56.4%
4383747 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.59 48.0 3.89e-01 92.2% 58.7%
5081087 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 50.0 4.47e-01 96.1% 89.1%
3633078 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 50.0 4.30e-01 96.1% 81.6%
4025081 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 48.0 3.94e-01 92.2% 61.3%
3583959 220.1.1.23 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ICAP-1_inte_bdg 0.58 49.0 4.08e-01 96.1% 91.0%
4482115 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.58 44.0 4.49e-01 94.8% 84.0%
3520079 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 47.0 4.17e-01 92.2% 80.0%
3216916 220.1.1.23 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ICAP-1_inte_bdg 0.57 47.0 3.90e-01 96.1% 82.0%
3528209 1170.1.1.0 ↗ beta barrels › IL8-related › IL8-related › IL8 0.57 45.0 4.70e-01 84.4% 98.6%
4024144 220.1.1.44 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.56 47.0 4.26e-01 92.2% 81.0%
3217097 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.56 48.0 4.04e-01 98.7% 72.6%
4029264 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 47.0 3.99e-01 98.7% 72.1%
3946366 211.1.1.6 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_3 0.55 42.0 3.31e-01 83.1% 82.3%
3931704 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.55 46.0 4.18e-01 96.1% 87.3%
3924235 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.55 47.0 3.58e-01 100.0% 46.8%
3738978 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 47.0 3.93e-01 98.7% 73.6%
4255411 220.1.1.126 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 0.55 39.0 3.51e-01 75.3% 80.0%
3496371 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 46.0 3.87e-01 98.7% 66.2%
3193874 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 47.0 4.08e-01 96.1% 89.9%
3699518 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.54 45.0 3.87e-01 92.2% 64.8%
3591463 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.54 45.0 3.98e-01 92.2% 70.4%
3171728 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.54 47.0 3.82e-01 96.1% 73.1%
3911245 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 44.0 3.98e-01 92.2% 78.2%
3469923 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 44.0 4.19e-01 92.2% 91.6%
3773618 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.53 45.0 3.79e-01 98.7% 72.9%
3916003 220.1.1.61 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 0.52 44.0 3.94e-01 96.1% 81.7%
3617441 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.52 37.0 2.66e-01 75.3% 47.0%
3471756 316.1.1.40 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_7 0.52 40.0 2.99e-01 84.4% 42.9%
3899369 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.52 42.0 3.48e-01 92.2% 57.3%
3269549 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 44.0 3.52e-01 96.1% 64.5%
3255344 220.1.1.27 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD 0.51 43.0 3.78e-01 96.1% 83.3%
3920905 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.51 43.0 3.72e-01 96.1% 66.1%
3669262 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.50 44.0 2.82e-01 100.0% 24.0%