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CG30

Euk-Vir

Choristoneura_rosaceana_nucleopolyhedrovirus

CG30__YP_008378419__Choristoneura_rosaceana_nucleopolyhedrovirus__58094

Identity

Accession:
YP_008378419 ↗
Protein ID:
CG30
Kingdom:
euk

Quality

80.5 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Choristoneura_rosaceana_nucleopolyhedrovirus

TaxID: 58094

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-92
PDB
Domain cluster: rep: CG30__YP_010086494__Spodoptera_exempta_nucleopolyhedrovirus__1242863__D3-115
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00097.32 best zf-C3HC4 27.9 2.40e-06 67.4% 100.0%
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bayE00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.77 50.0 5.88e-01 90.7% 96.6%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.77 30.0 3.41e-01 73.3% 46.3%
3ihpA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.73 48.0 4.37e-01 97.7% 50.0%
7yuiB01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.72 54.0 5.45e-01 100.0% 77.3%
3ztgA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.71 49.0 4.82e-01 88.4% 67.4%
4h8wC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 39.0 4.12e-01 73.3% 68.0%
2yu4A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.63 47.0 4.63e-01 89.5% 73.4%
1im3D00 2.60.40.1200 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 42.0 4.05e-01 74.4% 71.6%
6u7iB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 41.0 4.00e-01 76.7% 68.5%
1q1aA02 3.30.1600.10 Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' 0.57 35.0 3.23e-01 70.9% 45.9%
7cymA04 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.57 41.0 3.99e-01 76.7% 67.0%
3d85D02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 41.0 3.84e-01 75.6% 72.6%
6u7jA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 39.0 3.94e-01 75.6% 69.7%
4o5lL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 3.77e-01 75.6% 66.3%
2gk4A00 3.40.50.10300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like 0.53 34.0 2.52e-01 96.5% 24.0%
4jvuA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 3.55e-01 75.6% 61.8%
2i5bA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.53 34.0 2.43e-01 100.0% 20.8%
3eb8B01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.51 28.0 3.27e-01 89.5% 75.4%
1h3gA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 34.0 3.39e-01 74.4% 65.6%
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.64e-01 75.6% 72.2%
4p04A01 2.60.40.3100 Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain 0.50 35.0 3.30e-01 73.3% 60.4%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3333157 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.84 52.0 6.13e-01 94.2% 90.0%
3323549 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.83 52.0 6.41e-01 77.9% 100.0%
3700252 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.81 51.0 6.15e-01 97.7% 98.2%
3324882 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.80 62.0 6.42e-01 95.3% 86.3%
3601028 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.79 53.0 6.15e-01 83.7% 98.3%
3770713 376.1.1.29 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 0.78 55.0 5.67e-01 89.5% 77.5%
3275923 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.76 51.0 5.45e-01 94.2% 78.7%
3702317 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.75 55.0 6.18e-01 81.4% 100.0%
3925306 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.75 55.0 5.87e-01 91.9% 88.0%
3991259 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.75 48.0 5.69e-01 81.4% 93.3%
3506181 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.75 54.0 5.50e-01 88.4% 76.5%
3868349 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.74 53.0 5.42e-01 89.5% 75.3%
3717622 376.1.1.22 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.74 47.0 4.64e-01 91.9% 61.1%
3841616 376.1.1.22 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.74 49.0 5.44e-01 84.9% 85.5%
3687497 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.74 46.0 5.42e-01 80.2% 96.4%
3066048 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.74 53.0 5.26e-01 100.0% 71.4%
3527973 376.1.1.29 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 0.73 52.0 5.18e-01 89.5% 71.1%
3484139 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.72 50.0 4.43e-01 97.7% 49.6%
3594277 376.1.1.23 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.72 53.0 5.85e-01 89.5% 94.3%
3271900 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.72 51.0 5.47e-01 91.9% 85.3%
3993660 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.71 57.0 5.79e-01 88.4% 84.7%
3722318 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.71 51.0 5.57e-01 75.6% 92.9%
3525626 376.1.1.77 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RDM+zf-C3HC4_4 0.71 51.0 5.21e-01 89.5% 76.5%
3915520 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.71 50.0 5.17e-01 88.4% 78.8%
3743942 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.70 49.0 4.90e-01 89.5% 70.0%
3244384 376.1.1.151 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2, PF30896 0.69 49.0 4.17e-01 88.4% 46.7%
3457707 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.69 56.0 5.70e-01 89.5% 87.1%
3706198 376.1.1.29 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 0.69 52.0 5.37e-01 89.5% 85.0%
3939707 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.69 49.0 4.98e-01 88.4% 75.3%
3221216 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.68 53.0 5.08e-01 93.0% 71.0%
3233807 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.68 51.0 5.57e-01 90.7% 100.0%
3621893 376.1.1.75 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Pellino_RING 0.67 58.0 5.98e-01 94.2% 98.8%
3232280 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.67 56.0 5.70e-01 88.4% 97.6%
3825851 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.67 51.0 5.56e-01 98.8% 100.0%
3216754 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.66 54.0 4.52e-01 89.5% 52.9%
3792651 376.1.1.23 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.66 47.0 4.86e-01 88.4% 80.0%
4120038 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.64 55.0 5.66e-01 94.2% 98.8%
4079979 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.63 29.0 2.91e-01 76.7% 38.9%
3484418 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.63 56.0 5.51e-01 98.8% 91.1%
3562826 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.62 56.0 4.45e-01 96.5% 53.3%
4936585 2003.1.4.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 0.62 44.0 3.13e-01 73.3% 32.2%
3497893 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 32.0 3.15e-01 75.6% 46.3%
4036241 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.61 56.0 4.37e-01 98.8% 74.1%
3485716 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.60 42.0 3.28e-01 72.1% 34.7%
3488429 375.1.1.179 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.60 42.0 3.28e-01 72.1% 35.7%
3263784 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 44.0 3.50e-01 79.1% 56.5%
3598330 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 43.0 3.52e-01 79.1% 60.0%
4013642 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.56 48.0 4.84e-01 93.0% 96.5%
4206445 2003.1.4.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 0.56 40.0 2.88e-01 75.6% 33.5%
3494492 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 37.0 3.00e-01 75.6% 70.1%
3259065 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.51 32.0 3.34e-01 74.4% 68.8%
D2 medium residues 143-272
PDB
Domain cluster: rep: cg30__YP_009316092__Anticarsia_gemmatalis_multiple_nucleopolyhedrovirus__268591__D143-240