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CG_2015-01t_scaffold_1_prodigal-single.1__X__X__00034
Bact-VirCG_2015-01t_scaffold_1_prodigal-single.1__X__X__00034
Identity
- Kingdom:
- phage
Quality
93.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-82
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v3mA00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.60 | 44.0 | 4.27e-01 | 84.1% | 69.1% |
| 1gmnA01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.59 | 41.0 | 4.00e-01 | 72.0% | 75.0% |
| 4yo1A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 41.0 | 4.05e-01 | 74.4% | 75.3% |
| 2r7cA02 | 3.30.428.20 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Rotavirus NSP2 fragment, C-terminal domain | 0.57 | 43.0 | 3.51e-01 | 81.7% | 68.2% |
| 4rqyA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 46.0 | 4.01e-01 | 90.2% | 79.7% |
| 2hg6A00 | 3.90.1650.10 | Alpha Beta › Alpha-Beta Complex › PA1123-like › PA1123-like | 0.56 | 31.0 | 2.93e-01 | 93.9% | 41.5% |
| 1w8kA02 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.55 | 38.0 | 3.49e-01 | 72.0% | 62.7% |
| 1i8nA00 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.55 | 38.0 | 3.79e-01 | 73.2% | 73.0% |
| 2ll3A00 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.55 | 37.0 | 3.90e-01 | 72.0% | 81.4% |
| 2nwaA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.51 | 35.0 | 3.63e-01 | 70.7% | 88.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3924676 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.61 | 43.0 | 4.11e-01 | 73.2% | 71.6% |
| 3888455 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.59 | 41.0 | 4.03e-01 | 72.0% | 72.2% |
| 3226096 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.58 | 40.0 | 4.00e-01 | 72.0% | 77.6% |
| 3515084 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.57 | 40.0 | 4.05e-01 | 72.0% | 85.0% |
| 3723506 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.57 | 39.0 | 3.42e-01 | 70.7% | 56.6% |
| 3793353 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.56 | 39.0 | 3.85e-01 | 73.2% | 77.8% |
| 3798618 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.53 | 37.0 | 3.55e-01 | 73.2% | 76.0% |
| 5016508 | 75.1.1.9 ↗ | beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like › Cyclophil_like2 | 0.52 | 42.0 | 3.72e-01 | 86.6% | 76.5% |
| 4029116 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.52 | 39.0 | 3.87e-01 | 81.7% | 83.3% |
| 3968766 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.51 | 37.0 | 2.98e-01 | 95.1% | 37.6% |
| 3936711 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.50 | 35.0 | 3.68e-01 | 73.2% | 85.3% |