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CG_2015-01t_scaffold_1_prodigal-single.1__X__X__00077
Bact-VirCG_2015-01t_scaffold_1_prodigal-single.1__X__X__00077
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 51-125
Domain cluster:
rep: SR-VP_2-4_scaffold_141_1208361_prodigal-single.1__X__X__00651__D55-122
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rlfF03 | 2.40.430.10 | Mainly Beta › Beta Barrel › Periplasmic binding protein-like II › D-maltodextrin-binding protein, MBP | 0.72 | 45.0 | 4.28e-01 | 93.3% | 53.4% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.69 | 42.0 | 4.00e-01 | 70.7% | 52.8% |
| 1yemB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.65 | 48.0 | 3.74e-01 | 93.3% | 35.5% |
| 1jllB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.58 | 42.0 | 3.37e-01 | 77.3% | 75.5% |
| 8fkmA01 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.57 | 50.0 | 3.94e-01 | 100.0% | 77.4% |
| 6melB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.57 | 42.0 | 3.36e-01 | 80.0% | 61.3% |
| 2fggA01 | 3.30.160.240 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 | 0.56 | 39.0 | 3.91e-01 | 72.0% | 76.0% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 50.0 | 4.16e-01 | 100.0% | 68.2% |
| 4g6tA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 50.0 | 4.15e-01 | 100.0% | 67.2% |
| 6sulA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 37.0 | 3.31e-01 | 70.7% | 75.9% |
| 2eabB01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.55 | 48.0 | 3.38e-01 | 100.0% | 69.8% |
| 5ncsA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 45.0 | 3.68e-01 | 94.7% | 72.7% |
| 3fssA01 | 2.30.29.120 | Mainly Beta › Roll › PH-domain like › | 0.52 | 40.0 | 3.28e-01 | 82.7% | 57.4% |
| 2peeB02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 43.0 | 3.61e-01 | 94.7% | 71.8% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4179501 | 292.2.1.4 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_2 | 0.62 | 51.0 | 4.34e-01 | 89.3% | 65.0% |
| 5014253 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 40.0 | 4.19e-01 | 78.7% | 72.9% |
| 3164099 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.58 | 48.0 | 4.01e-01 | 92.0% | 80.7% |
| 3269848 | 12.1.1.23 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central | 0.57 | 41.0 | 3.36e-01 | 74.7% | 97.8% |
| 3555102 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.56 | 47.0 | 4.07e-01 | 94.7% | 92.5% |
| 1945733 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.55 | 48.0 | 3.81e-01 | 100.0% | 64.0% |
| 3632595 | 12.1.1.23 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central | 0.55 | 39.0 | 3.24e-01 | 74.7% | 91.5% |
| 3220090 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 46.0 | 2.88e-01 | 100.0% | 23.4% |
| 3596085 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.52 | 46.0 | 4.55e-01 | 100.0% | 95.0% |
| 3348291 | 243.1.1.53 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › WI12 | 0.51 | 45.0 | 3.59e-01 | 100.0% | 51.9% |
| 3319085 | 4099.1.1.27 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › DUF7806 | 0.51 | 43.0 | 3.91e-01 | 100.0% | 70.0% |