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CG_2015-01t_scaffold_1_prodigal-single.1__X__X__00180

Bact-Vir

CG_2015-01t_scaffold_1_prodigal-single.1__X__X__00180

Identity

Kingdom:
phage

Quality

66.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 24-83
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r76A00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.71 39.0 3.00e-01 96.7% 23.5%
3py9A04 2.60.40.2560 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 32.0 2.90e-01 90.0% 37.2%
3b2dC00 2.60.40.770 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 34.0 2.59e-01 88.3% 22.3%
5azsA02 2.20.200.10 Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.51 32.0 3.00e-01 100.0% 47.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1735187 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 33.0 2.49e-01 85.0% 21.9%
1155879 825.1.1.0 ↗ beta complex topology › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins 0.56 48.0 3.23e-01 98.3% 24.2%
3260147 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.53 28.0 2.39e-01 91.7% 24.8%
4311173 11.13.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like › Leukocidin 0.52 42.0 2.75e-01 96.7% 49.8%
4666595 11.1.5.64 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PIG-X 0.52 39.0 2.90e-01 86.7% 36.7%