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CG_2015-01t_scaffold_1_prodigal-single.1__X__X__00230
Bact-VirCG_2015-01t_scaffold_1_prodigal-single.1__X__X__00230
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1004-1081
D2
medium
residues 474-609
Domain cluster:
rep: LacPavin_0818_WC45_scaffold_160996_curated_closed_complete_prodigal-single.1__X__X__00808__D1309-1457
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hw4A01 | 3.50.20.20 | Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Janus/Ocnus | 0.65 | 41.0 | 4.46e-01 | 97.1% | 77.3% |
| 1ywhC03 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.58 | 34.0 | 4.12e-01 | 93.4% | 89.8% |
| 1nc7A00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.52 | 35.0 | 3.82e-01 | 78.7% | 81.0% |
| 2xc8A00 | 2.60.40.2980 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 35.0 | 3.66e-01 | 99.3% | 76.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3540023 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.57 | 35.0 | 4.12e-01 | 91.2% | 91.1% |
| 3726251 | 6109.1.1.1 ↗ | a+b two layers › N-terminal domain of chitin biosynthesis protein CHS6 › N-terminal domain of chitin biosynthesis protein CHS6 › N-terminal domain of chitin biosynthesis protein CHS6 › ChAPs | 0.56 | 42.0 | 3.96e-01 | 96.3% | 62.9% |
| 3924467 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.55 | 33.0 | 3.95e-01 | 94.1% | 90.0% |
| 4568169 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.50 | 29.0 | 3.41e-01 | 82.4% | 82.2% |