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CG_2015-01t_scaffold_1_prodigal-single.1__X__X__00320
Bact-VirCG_2015-01t_scaffold_1_prodigal-single.1__X__X__00320
Identity
- Kingdom:
- phage
Quality
86.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 69-125
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ztgA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.65 | 53.0 | 3.46e-01 | 91.2% | 29.7% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 53.0 | 4.45e-01 | 94.7% | 54.2% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.62 | 53.0 | 4.33e-01 | 98.2% | 52.3% |
| 3feoB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 53.0 | 4.73e-01 | 96.5% | 67.5% |
| 2mhgA00 | 2.20.130.30 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › Protein of unknown function DUF2782 | 0.62 | 45.0 | 4.17e-01 | 94.7% | 60.0% |
| 3qdfA01 | 2.30.30.370 | Mainly Beta › Roll › SH3 type barrels. › FAH | 0.60 | 53.0 | 5.27e-01 | 96.5% | 94.8% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 52.0 | 4.13e-01 | 100.0% | 70.6% |
| 2qggA02 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.59 | 48.0 | 4.35e-01 | 94.7% | 84.3% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 48.0 | 4.30e-01 | 94.7% | 72.6% |
| 8p2aA01 | 3.90.1010.20 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.58 | 48.0 | 4.25e-01 | 96.5% | 96.6% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 42.0 | 4.16e-01 | 98.2% | 76.2% |
| 4q5eA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 46.0 | 4.26e-01 | 91.2% | 97.3% |
| 6zxfz01 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.57 | 47.0 | 3.83e-01 | 100.0% | 87.8% |
| 7oiyA01 | 3.90.70.130 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.57 | 47.0 | 3.22e-01 | 100.0% | 84.5% |
| 2kgyA00 | 3.30.505.20 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › | 0.56 | 42.0 | 3.74e-01 | 91.2% | 53.3% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.56 | 45.0 | 4.39e-01 | 96.5% | 85.1% |
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 40.0 | 4.21e-01 | 98.2% | 94.0% |
| 3cqzH00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 40.0 | 3.30e-01 | 80.7% | 39.7% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.55 | 47.0 | 3.39e-01 | 96.5% | 32.7% |
| 1okeB02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.54 | 44.0 | 4.03e-01 | 98.2% | 66.2% |
| 3ceyB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 45.0 | 3.52e-01 | 100.0% | 52.5% |
| 3zxjA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 45.0 | 2.90e-01 | 100.0% | 89.1% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.53 | 41.0 | 2.73e-01 | 87.7% | 46.7% |
| 3bgtA01 | 2.40.400.10 | Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like | 0.53 | 43.0 | 3.01e-01 | 100.0% | 75.8% |
| 5ih0A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 40.0 | 3.57e-01 | 89.5% | 81.7% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.52 | 44.0 | 3.42e-01 | 100.0% | 93.6% |
| 5wceA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 42.0 | 3.39e-01 | 93.0% | 97.5% |
| 3tu3B01 | 3.30.720.80 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.51 | 44.0 | 4.05e-01 | 100.0% | 80.3% |
| 4boeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 41.0 | 3.16e-01 | 96.5% | 71.4% |
| 1sqiA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 42.0 | 3.15e-01 | 100.0% | 70.7% |
| 3hslX00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 40.0 | 2.61e-01 | 91.2% | 89.9% |
| 1oo0A00 | 3.30.1560.10 | Alpha Beta › 2-Layer Sandwich › Mago nashi protein › Mago nashi | 0.50 | 40.0 | 3.12e-01 | 94.7% | 91.0% |
| 1zylA01 | 3.30.200.70 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.50 | 39.0 | 3.75e-01 | 91.2% | 80.0% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4014881 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 58.0 | 5.77e-01 | 93.0% | 93.3% |
| 3784334 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.66 | 51.0 | 5.08e-01 | 93.0% | 81.7% |
| 3675653 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.66 | 54.0 | 5.00e-01 | 93.0% | 86.7% |
| 3597513 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 49.0 | 5.05e-01 | 89.5% | 85.5% |
| 4581369 | 4.1.1.166 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2314 | 0.63 | 52.0 | 4.37e-01 | 96.5% | 74.3% |
| 3729690 | 4.1.1.170 ↗ | beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind | 0.63 | 54.0 | 4.51e-01 | 94.7% | 82.1% |
| 1759629 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.62 | 56.0 | 4.52e-01 | 100.0% | 65.4% |
| 3237314 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.62 | 50.0 | 4.35e-01 | 91.2% | 88.9% |
| 3592075 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 51.0 | 4.53e-01 | 94.7% | 80.0% |
| 4004815 | 4.1.1.166 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2314 | 0.61 | 51.0 | 4.10e-01 | 98.2% | 52.8% |
| 4330393 | 243.3.1.23 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3027 | 0.59 | 49.0 | 4.27e-01 | 93.0% | 63.6% |
| 3786430 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 43.0 | 4.53e-01 | 98.2% | 96.0% |
| 5081762 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 46.0 | 2.71e-01 | 87.7% | 93.0% |
| 3736283 | 4295.1.1.0 ↗ | beta barrels › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like | 0.58 | 44.0 | 3.20e-01 | 89.5% | 67.0% |
| 3235763 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.58 | 46.0 | 4.20e-01 | 91.2% | 100.0% |
| 3948255 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 48.0 | 3.75e-01 | 96.5% | 56.2% |
| 3266531 | 234.3.1.0 ↗ | a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain | 0.57 | 50.0 | 3.61e-01 | 100.0% | 53.9% |
| 5028935 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 42.0 | 4.00e-01 | 87.7% | 65.7% |
| 3580054 | 62.1.1.1 ↗ | beta meanders › Carbonic anhydrase › Carbonic anhydrase › Carbonic anhydrase › Carb_anhydrase | 0.56 | 44.0 | 3.23e-01 | 91.2% | 59.4% |
| 3194888 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.54 | 45.0 | 3.39e-01 | 100.0% | 45.6% |
| 3624211 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.54 | 42.0 | 3.12e-01 | 89.5% | 48.5% |
| 3507907 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.54 | 43.0 | 3.44e-01 | 93.0% | 57.6% |
| 3819740 | 284.1.3.4 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK | 0.53 | 43.0 | 3.87e-01 | 98.2% | 86.7% |
| 3389662 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.53 | 43.0 | 3.97e-01 | 96.5% | 80.0% |
| 3295575 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.53 | 42.0 | 3.63e-01 | 93.0% | 80.0% |
| 4971247 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.53 | 36.0 | 3.29e-01 | 87.7% | 51.2% |
| 3594322 | 5.1.4.242 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N | 0.53 | 44.0 | 2.70e-01 | 98.2% | 14.2% |
| 3800832 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.52 | 38.0 | 3.65e-01 | 82.5% | 71.4% |
| 3935844 | 5.1.3.204 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7911 | 0.51 | 44.0 | 2.78e-01 | 98.2% | 77.8% |
| 5015089 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 42.0 | 2.88e-01 | 98.2% | 36.3% |