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CG_2015-01t_scaffold_1_prodigal-single.1__X__X__00466
Bact-VirCG_2015-01t_scaffold_1_prodigal-single.1__X__X__00466
Identity
- Kingdom:
- phage
Quality
78.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 25-80
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ddtC00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.55 | 38.0 | 4.07e-01 | 98.2% | 95.5% |
| 3knvA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 46.0 | 3.63e-01 | 100.0% | 54.5% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3904123 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.55 | 47.0 | 3.77e-01 | 100.0% | 60.0% |
| 3596219 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.55 | 47.0 | 4.10e-01 | 100.0% | 64.8% |
| 3655044 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.54 | 47.0 | 4.62e-01 | 100.0% | 98.3% |
| 2707795 | 376.1.1.38 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › TRAF3_RING | 0.52 | 44.0 | 3.96e-01 | 100.0% | 71.1% |
| 3913667 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.51 | 44.0 | 3.41e-01 | 100.0% | 43.8% |
| 3508056 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.51 | 38.0 | 3.73e-01 | 96.4% | 75.4% |
| 4472427 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.51 | 41.0 | 3.66e-01 | 94.6% | 98.8% |
| 3248074 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.51 | 42.0 | 3.18e-01 | 100.0% | 57.4% |
| 3600901 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.50 | 42.0 | 3.55e-01 | 100.0% | 56.2% |