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CG_2015-01t_scaffold_1_prodigal-single.1__X__X__00578

Bact-Vir

CG_2015-01t_scaffold_1_prodigal-single.1__X__X__00578

Identity

Kingdom:
phage

Quality

71.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-72
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nb0B03 6.10.260.10 Special › Helix non-globular › F1FO ATP Synthase › 0.75 58.0 5.48e-01 84.5% 69.0%
1y1xB00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.54 41.0 3.08e-01 81.7% 78.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3173586 3939.1.1.320 ↗ alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › PF29964 0.72 58.0 5.16e-01 87.3% 68.0%
4292483 1132.1.1.21 ↗ extended segments › Mitochondrial complex I, B16.6 subunit › Mitochondrial complex I, B16.6 subunit › Mitochondrial complex I, B16.6 subunit › Mei5 0.69 46.0 4.30e-01 77.5% 56.5%
4959036 5058.1.1.0 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.66 58.0 5.16e-01 100.0% 94.3%