←Back to structures
CG_2015-01t_scaffold_23_prodigal-single.1__X__X__00052
Bact-VirCG_2015-01t_scaffold_23_prodigal-single.1__X__X__00052
Identity
- Kingdom:
- phage
Quality
58.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 36-199_618-688
Domain cluster:
rep: IMGVR_UViG_3300020814_000341-3300020814-Ga0214088_182449110__D102-238
D2
medium
residues 200-225_544-617
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cw8A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.80 | 59.0 | 4.82e-01 | 76.0% | 69.2% |
| 4o1sA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.77 | 57.0 | 4.66e-01 | 77.0% | 67.6% |
| 1dq3A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.76 | 56.0 | 4.52e-01 | 76.0% | 69.5% |
| 2jmzA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.74 | 54.0 | 4.46e-01 | 76.0% | 68.5% |
| 2imzA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.74 | 54.0 | 4.69e-01 | 75.0% | 78.2% |
| 4e2tB00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.73 | 54.0 | 4.45e-01 | 76.0% | 70.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029355 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.86 | 63.0 | 5.39e-01 | 76.0% | 76.7% |
| 5012699 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 62.0 | 5.03e-01 | 75.0% | 84.1% |
| 4945569 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 62.0 | 5.20e-01 | 77.0% | 76.8% |
| 4993853 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 61.0 | 5.00e-01 | 76.0% | 68.5% |
| 4933756 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.82 | 60.0 | 5.28e-01 | 76.0% | 80.7% |
| 4930433 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.80 | 60.0 | 5.04e-01 | 77.0% | 74.8% |
| 4992651 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.78 | 59.0 | 4.89e-01 | 78.0% | 69.7% |
| 5023539 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.76 | 56.0 | 4.68e-01 | 75.0% | 68.4% |
| 4971400 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.69 | 61.0 | 4.19e-01 | 92.0% | 54.2% |
| 2546507 | 69.1.1.2 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint | 0.66 | 48.0 | 4.23e-01 | 76.0% | 80.4% |
D3
medium
residues 226-312
D4
medium
residues 334-421
Domain cluster:
rep: CG_2015-01t_scaffold_23_prodigal-single.1__X__X__00049__D239-307
CATH (83)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7qssA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.90 | 77.0 | 5.84e-01 | 100.0% | 42.0% |
| 2dchX01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.84 | 74.0 | 7.28e-01 | 100.0% | 89.2% |
| 1dq3A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.81 | 74.0 | 7.47e-01 | 96.6% | 100.0% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.80 | 72.0 | 7.02e-01 | 96.6% | 94.7% |
| 3hyiA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.78 | 68.0 | 5.24e-01 | 97.7% | 43.5% |
| 1dfaA03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.77 | 68.0 | 6.66e-01 | 95.5% | 91.6% |
| 3ko2A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.76 | 70.0 | 5.64e-01 | 100.0% | 84.5% |
| 2atzA00 | 3.90.920.20 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › HP0184-like | 0.72 | 55.0 | 4.37e-01 | 80.7% | 51.7% |
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.70 | 61.0 | 5.86e-01 | 98.9% | 90.3% |
| 2cdqA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.67 | 51.0 | 5.22e-01 | 84.1% | 85.7% |
| 2hqyA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.66 | 44.0 | 3.87e-01 | 79.5% | 46.2% |
| 8gccA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.65 | 49.0 | 4.98e-01 | 84.1% | 82.6% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.65 | 50.0 | 4.02e-01 | 80.7% | 90.4% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.65 | 48.0 | 4.69e-01 | 78.4% | 77.1% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.65 | 52.0 | 5.37e-01 | 87.5% | 97.6% |
| 2dt9A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 46.0 | 4.96e-01 | 84.1% | 91.9% |
| 1vkwA02 | 3.40.109.30 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › putative nitroreductase (tm1586), domain 2 | 0.63 | 47.0 | 4.65e-01 | 79.5% | 77.1% |
| 6gmhK00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.62 | 47.0 | 4.34e-01 | 80.7% | 61.7% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 44.0 | 4.50e-01 | 73.9% | 80.0% |
| 2dy1A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.62 | 36.0 | 3.81e-01 | 72.7% | 64.5% |
| 3upsA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.62 | 48.0 | 4.50e-01 | 83.0% | 73.1% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 43.0 | 4.27e-01 | 71.6% | 80.0% |
| 4d9uA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 44.0 | 4.46e-01 | 75.0% | 77.3% |
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.62 | 44.0 | 4.12e-01 | 81.8% | 59.5% |
| 4aukA01 | 3.30.70.2810 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 42.0 | 4.41e-01 | 71.6% | 91.1% |
| 1dcoA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.61 | 46.0 | 4.52e-01 | 83.0% | 78.8% |
| 4v1al00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.61 | 46.0 | 4.09e-01 | 84.1% | 54.9% |
| 1zvpD00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.61 | 50.0 | 4.38e-01 | 89.8% | 90.1% |
| 1vq8S00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 46.0 | 4.82e-01 | 84.1% | 95.1% |
| 6lpnA04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 44.0 | 4.31e-01 | 77.3% | 96.8% |
| 2qyxB01 | 3.30.70.1360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › mj0159-like | 0.60 | 43.0 | 4.03e-01 | 75.0% | 79.8% |
| 1weyA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 41.0 | 3.97e-01 | 72.7% | 73.1% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.60 | 41.0 | 4.50e-01 | 76.1% | 92.5% |
| 2if1A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.59 | 47.0 | 4.19e-01 | 86.4% | 66.7% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.59 | 41.0 | 4.42e-01 | 72.7% | 85.3% |
| 4oj3B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 41.0 | 4.06e-01 | 72.7% | 75.8% |
| 2g0iA00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.59 | 46.0 | 4.34e-01 | 85.2% | 96.4% |
| 1nh8A03 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 40.0 | 4.55e-01 | 71.6% | 95.5% |
| 2ww4A02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.58 | 42.0 | 3.82e-01 | 76.1% | 86.6% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.58 | 40.0 | 4.00e-01 | 72.7% | 69.1% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 48.0 | 4.64e-01 | 96.6% | 81.0% |
| 1qupA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 40.0 | 4.31e-01 | 71.6% | 91.4% |
| 4g9yA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 47.0 | 4.09e-01 | 96.6% | 58.1% |
| 3zxoA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.57 | 44.0 | 4.01e-01 | 85.2% | 68.8% |
| 7xinA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 45.0 | 4.23e-01 | 86.4% | 77.1% |
| 4dzrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 39.0 | 3.27e-01 | 71.6% | 77.9% |
| 3hbxA03 | 3.90.1150.160 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.57 | 45.0 | 4.51e-01 | 85.2% | 88.6% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 47.0 | 3.96e-01 | 96.6% | 52.9% |
| 3pqvC01 | 3.65.10.20 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain | 0.57 | 45.0 | 3.32e-01 | 88.6% | 96.1% |
| 8agaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 45.0 | 4.10e-01 | 96.6% | 62.7% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 47.0 | 4.21e-01 | 94.3% | 75.2% |
| 1yyvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 50.0 | 4.62e-01 | 100.0% | 80.4% |
| 4xrfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 47.0 | 4.03e-01 | 96.6% | 57.0% |
| 2mzwA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.56 | 40.0 | 4.22e-01 | 73.9% | 94.7% |
| 2jvrA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 39.0 | 4.03e-01 | 72.7% | 93.8% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.56 | 40.0 | 3.31e-01 | 75.0% | 93.6% |
| 2fbhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 46.0 | 4.00e-01 | 97.7% | 59.1% |
| 4qmfB01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.55 | 39.0 | 4.01e-01 | 72.7% | 82.9% |
| 4g6tA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 42.0 | 3.69e-01 | 79.5% | 63.3% |
| 1u6mA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 44.0 | 3.40e-01 | 84.1% | 100.0% |
| 3bpvA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 46.0 | 3.99e-01 | 96.6% | 59.1% |
| 1p4xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 45.0 | 4.04e-01 | 95.5% | 63.0% |
| 2p92A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.55 | 43.0 | 4.22e-01 | 85.2% | 98.9% |
| 1lj9B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 46.0 | 3.96e-01 | 97.7% | 57.7% |
| 2ethA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 44.0 | 3.86e-01 | 96.6% | 56.7% |
| 2qsrA01 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.54 | 46.0 | 3.85e-01 | 95.5% | 70.3% |
| 6ko5A02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 46.0 | 3.21e-01 | 94.3% | 85.3% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 42.0 | 3.70e-01 | 83.0% | 64.3% |
| 1kyzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 45.0 | 4.34e-01 | 94.3% | 81.6% |
| 3broD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 45.0 | 4.02e-01 | 100.0% | 63.4% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 45.0 | 3.93e-01 | 96.6% | 60.3% |
| 5hs7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 46.0 | 4.44e-01 | 97.7% | 86.7% |
| 5ghrA02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.53 | 40.0 | 3.66e-01 | 84.1% | 76.0% |
| 1jrmA00 | 3.30.1200.10 | Alpha Beta › 2-Layer Sandwich › Conserved Hypothetical Protein Mth637; Chain: A; › YggU-like | 0.52 | 43.0 | 4.09e-01 | 95.5% | 77.9% |
| 7uvpA02 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.52 | 36.0 | 3.91e-01 | 71.6% | 100.0% |
| 2fbiA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 44.0 | 3.88e-01 | 97.7% | 61.8% |
| 6pcoC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 45.0 | 3.99e-01 | 100.0% | 65.2% |
| 3g87A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.52 | 36.0 | 3.99e-01 | 76.1% | 97.0% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 4.10e-01 | 94.3% | 78.3% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 45.0 | 3.92e-01 | 100.0% | 78.9% |
| 4g08A02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.51 | 34.0 | 3.67e-01 | 71.6% | 85.7% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 43.0 | 4.15e-01 | 94.3% | 83.5% |
| 1k3sA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.50 | 37.0 | 3.51e-01 | 79.5% | 76.9% |
ECOD (84)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4941328 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.92 | 86.0 | 7.61e-01 | 100.0% | 71.7% |
| 4142602 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.91 | 85.0 | 8.09e-01 | 100.0% | 86.0% |
| 4972476 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.91 | 76.0 | 7.78e-01 | 96.6% | 90.6% |
| 4575751 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.91 | 79.0 | 7.85e-01 | 97.7% | 88.9% |
| 5028313 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.91 | 76.0 | 7.96e-01 | 96.6% | 96.2% |
| 4979990 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.90 | 85.0 | 7.30e-01 | 100.0% | 67.7% |
| 4943232 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.88 | 76.0 | 7.40e-01 | 100.0% | 84.2% |
| 4946208 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.87 | 79.0 | 7.86e-01 | 100.0% | 93.3% |
| 5013983 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.87 | 77.0 | 6.88e-01 | 100.0% | 69.2% |
| 5030214 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.87 | 75.0 | 7.29e-01 | 100.0% | 84.2% |
| 4937053 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.87 | 81.0 | 7.76e-01 | 100.0% | 99.0% |
| 5052596 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.86 | 81.0 | 7.69e-01 | 100.0% | 93.0% |
| 4979525 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.86 | 79.0 | 5.89e-01 | 100.0% | 43.6% |
| 5009157 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.86 | 78.0 | 7.18e-01 | 96.6% | 88.2% |
| 3602137 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.86 | 82.0 | 7.95e-01 | 100.0% | 94.7% |
| 5029541 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.86 | 77.0 | 7.65e-01 | 100.0% | 92.2% |
| 5027652 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.86 | 80.0 | 7.80e-01 | 100.0% | 91.6% |
| 5065185 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.86 | 79.0 | 7.89e-01 | 100.0% | 96.7% |
| 4681936 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.86 | 81.0 | 7.28e-01 | 100.0% | 85.2% |
| 5028135 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.85 | 79.0 | 7.18e-01 | 100.0% | 81.7% |
| 5027648 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.85 | 77.0 | 7.82e-01 | 97.7% | 98.8% |
| 1159603 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.85 | 74.0 | 7.66e-01 | 98.9% | 100.0% |
| 4977674 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.85 | 79.0 | 5.71e-01 | 100.0% | 39.5% |
| 5031635 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.85 | 79.0 | 7.71e-01 | 100.0% | 92.6% |
| 4389430 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.85 | 77.0 | 7.09e-01 | 96.6% | 80.9% |
| 4993850 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.85 | 80.0 | 7.76e-01 | 100.0% | 95.8% |
| 4934117 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.84 | 72.0 | 7.33e-01 | 89.8% | 96.5% |
| 4997777 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.83 | 73.0 | 7.48e-01 | 100.0% | 97.6% |
| 4937999 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.83 | 77.0 | 7.65e-01 | 100.0% | 100.0% |
| 4999898 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.83 | 77.0 | 7.66e-01 | 98.9% | 100.0% |
| 4997780 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.82 | 69.0 | 7.22e-01 | 93.2% | 98.8% |
| 3602220 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.82 | 71.0 | 7.27e-01 | 95.5% | 96.5% |
| 3604412 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.81 | 75.0 | 7.22e-01 | 100.0% | 96.0% |
| 5029251 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.81 | 72.0 | 7.33e-01 | 95.5% | 100.0% |
| 5065094 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.81 | 73.0 | 6.41e-01 | 100.0% | 68.0% |
| 3602727 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.80 | 70.0 | 7.01e-01 | 95.5% | 92.2% |
| 4992659 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.80 | 62.0 | 5.62e-01 | 93.2% | 62.6% |
| 4221596 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.80 | 75.0 | 6.75e-01 | 100.0% | 84.3% |
| 4997781 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.79 | 73.0 | 6.86e-01 | 98.9% | 82.9% |
| 4938000 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.79 | 71.0 | 6.96e-01 | 96.6% | 88.4% |
| 4354369 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.79 | 74.0 | 6.80e-01 | 100.0% | 88.2% |
| 5049353 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.79 | 73.0 | 6.42e-01 | 100.0% | 78.4% |
| 4943293 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.78 | 72.0 | 6.61e-01 | 98.9% | 80.9% |
| 4971295 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.78 | 71.0 | 6.94e-01 | 98.9% | 95.8% |
| 4171346 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.77 | 70.0 | 6.28e-01 | 98.9% | 80.8% |
| 1211839 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.77 | 67.0 | 6.56e-01 | 96.6% | 96.9% |
| 3603759 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.76 | 70.0 | 6.54e-01 | 97.7% | 83.8% |
| 4933368 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.76 | 66.0 | 6.73e-01 | 100.0% | 97.6% |
| 4991837 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.75 | 66.0 | 6.46e-01 | 96.6% | 87.4% |
| 3290652 | 306.2.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor | 0.68 | 60.0 | 6.05e-01 | 100.0% | 100.0% |
| 2879783 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.68 | 48.0 | 5.14e-01 | 72.7% | 93.3% |
| 5041224 | 306.2.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor | 0.67 | 58.0 | 5.92e-01 | 96.6% | 100.0% |
| 5011633 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.66 | 52.0 | 4.97e-01 | 85.2% | 84.6% |
| 4939299 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.65 | 41.0 | 4.11e-01 | 70.5% | 62.2% |
| 3249184 | 305.2.1.1 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a | 0.65 | 50.0 | 4.88e-01 | 83.0% | 81.1% |
| 4943445 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.65 | 40.0 | 4.32e-01 | 70.5% | 73.3% |
| 4105204 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.64 | 40.0 | 4.16e-01 | 70.5% | 68.8% |
| 3609340 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.62 | 49.0 | 4.84e-01 | 85.2% | 88.4% |
| 3641694 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.62 | 50.0 | 4.72e-01 | 86.4% | 80.0% |
| 4968594 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.62 | 45.0 | 4.84e-01 | 79.5% | 90.7% |
| 5013284 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.62 | 48.0 | 5.17e-01 | 85.2% | 100.0% |
| 5620 | 320.3.1.1 ↗ | a+b two layers › R3H domain-like › PG1857-like › PG1857-like › DUF2023 | 0.62 | 44.0 | 4.12e-01 | 81.8% | 59.5% |
| 3593859 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.61 | 48.0 | 4.61e-01 | 85.2% | 78.1% |
| 4971032 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.61 | 42.0 | 4.34e-01 | 72.7% | 81.2% |
| 3307802 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.61 | 47.0 | 4.80e-01 | 85.2% | 92.0% |
| 4297454 | 306.3.1.2 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › Img2 | 0.61 | 46.0 | 4.04e-01 | 84.1% | 52.9% |
| 5048236 | 314.1.1.3 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d | 0.60 | 46.0 | 3.12e-01 | 84.1% | 60.5% |
| 3790940 | 306.3.1.2 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › Img2 | 0.60 | 47.0 | 4.28e-01 | 85.2% | 79.0% |
| 4981202 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.60 | 43.0 | 4.53e-01 | 79.5% | 88.0% |
| 5014255 | 220.1.1.87 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 | 0.60 | 48.0 | 4.11e-01 | 85.2% | 91.1% |
| 4248896 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.60 | 42.0 | 4.72e-01 | 81.8% | 98.5% |
| 3603204 | 304.110.1.1 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase | 0.60 | 41.0 | 4.61e-01 | 72.7% | 98.5% |
| 4962953 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.59 | 44.0 | 4.69e-01 | 83.0% | 93.3% |
| 5013279 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.58 | 45.0 | 4.76e-01 | 84.1% | 98.7% |
| 5020125 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.58 | 40.0 | 4.34e-01 | 77.3% | 90.0% |
| 4037103 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.58 | 38.0 | 4.30e-01 | 71.6% | 92.3% |
| 4012791 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.58 | 40.0 | 4.17e-01 | 72.7% | 91.3% |
| 4944813 | 101.1.2.819 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27231 | 0.58 | 50.0 | 4.02e-01 | 100.0% | 71.9% |
| 4487953 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 42.0 | 4.55e-01 | 80.7% | 94.7% |
| 4960260 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.56 | 40.0 | 4.27e-01 | 78.4% | 94.3% |
| 5070232 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 42.0 | 4.25e-01 | 96.6% | 83.5% |
| 11071 | 213.1.1.72 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1, Acetyltransf_10 | 0.55 | 44.0 | 3.40e-01 | 84.1% | 100.0% |
| 5000702 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 47.0 | 4.83e-01 | 97.7% | 98.8% |
| 3977793 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 45.0 | 4.47e-01 | 96.6% | 93.6% |
D5
medium
residues 422-543
Domain cluster:
rep: IMGVR_UViG_3300027815_000166-3300027815-Ga0209726_100069296__D104-209
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7qssA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.89 | 62.0 | 5.24e-01 | 91.0% | 46.3% |
| 2vs7A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.84 | 51.0 | 6.38e-01 | 83.6% | 96.2% |
| 1ef0B02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.79 | 60.0 | 5.13e-01 | 100.0% | 51.1% |
| 2dchX01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.79 | 56.0 | 6.44e-01 | 94.3% | 95.7% |
| 1dfaA03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.79 | 59.0 | 6.68e-01 | 91.0% | 100.0% |
| 1dq3A04 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.77 | 64.0 | 6.64e-01 | 98.4% | 93.0% |
| 2cw8A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.76 | 50.0 | 4.44e-01 | 86.9% | 47.9% |
| 1dq3A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.76 | 52.0 | 6.04e-01 | 83.6% | 97.7% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.73 | 63.0 | 6.64e-01 | 98.4% | 99.1% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.68 | 49.0 | 5.38e-01 | 85.2% | 94.7% |
| 8dy9I01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.67 | 64.0 | 5.23e-01 | 100.0% | 85.9% |
| 3c0wA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.66 | 48.0 | 4.84e-01 | 87.7% | 75.8% |
| 3hz7A00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.66 | 37.0 | 4.65e-01 | 100.0% | 91.8% |
| 1dcjA00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.65 | 36.0 | 4.32e-01 | 91.8% | 81.5% |
| 2w7vA00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.64 | 38.0 | 4.49e-01 | 77.9% | 86.6% |
| 3hyiA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.63 | 59.0 | 4.96e-01 | 99.2% | 81.7% |
| 3hbxA03 | 3.90.1150.160 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.62 | 39.0 | 4.46e-01 | 77.0% | 87.5% |
| 6gmhK00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.61 | 40.0 | 4.11e-01 | 95.9% | 69.6% |
| 1l3iA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 38.0 | 3.29e-01 | 85.2% | 42.2% |
| 4lq0A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.60 | 51.0 | 4.82e-01 | 95.9% | 76.9% |
| 5ewqC00 | 3.90.1300.10 | Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain | 0.58 | 44.0 | 2.94e-01 | 79.5% | 91.6% |
| 3mf1B00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.57 | 43.0 | 3.33e-01 | 80.3% | 87.6% |
| 1j5wB01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 46.0 | 3.92e-01 | 87.7% | 89.6% |
| 1ej6A02 | 3.55.60.10 | Alpha Beta › 3-Layer(bab) Sandwich › Reovirus components fold › Reovirus components | 0.56 | 45.0 | 4.20e-01 | 85.2% | 70.3% |
| 1yzhB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 42.0 | 3.47e-01 | 88.5% | 46.6% |
| 3w3sA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 42.0 | 3.06e-01 | 81.1% | 77.7% |
| 5zg8A02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 44.0 | 3.26e-01 | 86.9% | 85.3% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.54 | 39.0 | 4.23e-01 | 86.9% | 90.9% |
| 6nifA01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.54 | 38.0 | 3.22e-01 | 73.0% | 72.1% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.53 | 42.0 | 3.49e-01 | 82.8% | 91.4% |
| 3b8xA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 40.0 | 3.99e-01 | 77.9% | 82.3% |
| 1mw7A03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.52 | 31.0 | 3.94e-01 | 78.7% | 98.7% |
| 1o0vA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 4.36e-01 | 98.4% | 95.5% |
| 2cfaA01 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.51 | 38.0 | 3.64e-01 | 78.7% | 94.4% |
| 3eeeA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.51 | 46.0 | 3.97e-01 | 99.2% | 98.4% |
| 2g9gA00 | 2.60.120.1020 | Mainly Beta › Sandwich › Jelly Rolls › PAW domain | 0.50 | 42.0 | 3.67e-01 | 91.8% | 74.6% |
ECOD (96)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4113237 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.90 | 68.0 | 7.70e-01 | 100.0% | 98.9% |
| 5046395 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.90 | 55.0 | 6.99e-01 | 83.6% | 100.0% |
| 5066572 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.88 | 61.0 | 6.58e-01 | 93.4% | 81.9% |
| 3603296 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.88 | 70.0 | 5.93e-01 | 98.4% | 54.1% |
| 4938000 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.88 | 67.0 | 7.52e-01 | 96.7% | 100.0% |
| 5030783 | 242.1.1.3 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › Hom_end | 0.86 | 65.0 | 7.36e-01 | 94.3% | 100.0% |
| 4941329 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.85 | 68.0 | 7.47e-01 | 95.1% | 100.0% |
| 4993483 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.85 | 68.0 | 7.29e-01 | 98.4% | 95.2% |
| 5029357 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.85 | 73.0 | 7.59e-01 | 100.0% | 94.8% |
| 4934172 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.85 | 49.0 | 6.41e-01 | 86.1% | 100.0% |
| 3602142 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.84 | 69.0 | 7.45e-01 | 95.9% | 99.0% |
| 4669669 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.84 | 66.0 | 6.92e-01 | 97.5% | 89.1% |
| 5065935 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.83 | 51.0 | 6.43e-01 | 86.9% | 100.0% |
| 5023791 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.83 | 72.0 | 7.56e-01 | 100.0% | 100.0% |
| 3604140 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.82 | 66.0 | 5.64e-01 | 100.0% | 55.1% |
| 5052155 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.82 | 65.0 | 5.64e-01 | 99.2% | 57.1% |
| 5028136 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.82 | 73.0 | 7.58e-01 | 99.2% | 99.1% |
| 5078552 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.82 | 70.0 | 6.04e-01 | 100.0% | 61.7% |
| 4629783 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.82 | 70.0 | 7.07e-01 | 100.0% | 90.8% |
| 4212314 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.82 | 64.0 | 7.06e-01 | 98.4% | 100.0% |
| 3950413 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.81 | 67.0 | 7.04e-01 | 98.4% | 94.5% |
| 3952678 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.81 | 58.0 | 6.79e-01 | 85.2% | 100.0% |
| 4937054 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.81 | 67.0 | 7.20e-01 | 100.0% | 100.0% |
| 4998393 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.81 | 70.0 | 7.35e-01 | 100.0% | 99.1% |
| 4127810 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.80 | 71.0 | 7.24e-01 | 99.2% | 94.2% |
| 4084747 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.80 | 66.0 | 4.69e-01 | 98.4% | 32.5% |
| 4996403 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.80 | 57.0 | 6.57e-01 | 86.9% | 97.8% |
| 4075546 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.80 | 56.0 | 6.47e-01 | 88.5% | 97.8% |
| 3602910 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.80 | 53.0 | 6.07e-01 | 86.9% | 91.1% |
| 3603293 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.80 | 71.0 | 7.39e-01 | 100.0% | 99.1% |
| 4950411 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.80 | 61.0 | 6.79e-01 | 88.5% | 97.0% |
| 5029252 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.80 | 70.0 | 7.06e-01 | 100.0% | 92.5% |
| 4950410 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.80 | 49.0 | 6.00e-01 | 88.5% | 95.0% |
| 5027649 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.79 | 71.0 | 7.20e-01 | 100.0% | 95.0% |
| 3282322 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.79 | 70.0 | 7.25e-01 | 99.2% | 98.3% |
| 4064719 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.79 | 65.0 | 6.99e-01 | 96.7% | 100.0% |
| 4412539 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.79 | 68.0 | 5.91e-01 | 96.7% | 62.9% |
| 4171346 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.79 | 71.0 | 7.17e-01 | 98.4% | 95.8% |
| 172962 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.78 | 56.0 | 6.01e-01 | 95.1% | 84.9% |
| 4943293 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.78 | 66.0 | 6.91e-01 | 97.5% | 97.3% |
| 4086765 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.78 | 66.0 | 6.94e-01 | 98.4% | 98.2% |
| 5065185 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.78 | 54.0 | 6.23e-01 | 87.7% | 96.7% |
| 4994374 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.78 | 70.0 | 7.15e-01 | 98.4% | 96.7% |
| 5046394 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.78 | 53.0 | 6.14e-01 | 86.1% | 94.4% |
| 5065094 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.78 | 51.0 | 5.15e-01 | 87.7% | 65.6% |
| 4997781 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.77 | 63.0 | 6.75e-01 | 99.2% | 99.0% |
| 3602137 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.77 | 54.0 | 6.13e-01 | 86.9% | 92.6% |
| 4971295 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.77 | 58.0 | 6.48e-01 | 88.5% | 100.0% |
| 4587247 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.77 | 50.0 | 5.79e-01 | 87.7% | 90.0% |
| 5031916 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.76 | 72.0 | 7.19e-01 | 100.0% | 96.8% |
| 4939276 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.76 | 66.0 | 6.81e-01 | 98.4% | 95.7% |
| 4937999 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.76 | 53.0 | 6.05e-01 | 87.7% | 95.6% |
| 4977674 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.76 | 68.0 | 5.49e-01 | 100.0% | 52.7% |
| 3955114 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.76 | 71.0 | 6.86e-01 | 98.4% | 91.1% |
| 4999898 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.76 | 53.0 | 6.08e-01 | 86.9% | 96.7% |
| 4993583 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.76 | 65.0 | 6.57e-01 | 98.4% | 90.8% |
| 4997777 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.76 | 50.0 | 5.88e-01 | 86.9% | 96.5% |
| 3603119 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.76 | 69.0 | 7.04e-01 | 100.0% | 97.5% |
| 5012958 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.76 | 51.0 | 4.99e-01 | 88.5% | 63.8% |
| 5031636 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.76 | 69.0 | 7.00e-01 | 100.0% | 98.3% |
| 5032338 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.75 | 70.0 | 7.07e-01 | 99.2% | 99.2% |
| 4975576 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.75 | 52.0 | 5.98e-01 | 88.5% | 96.7% |
| 4993734 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.75 | 71.0 | 5.67e-01 | 100.0% | 57.7% |
| 5031635 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.75 | 52.0 | 5.78e-01 | 87.7% | 90.5% |
| 4999899 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.75 | 68.0 | 6.78e-01 | 95.9% | 94.4% |
| 5012702 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.75 | 67.0 | 6.90e-01 | 96.7% | 100.0% |
| 5052597 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.74 | 69.0 | 6.55e-01 | 97.5% | 100.0% |
| 5066391 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.74 | 65.0 | 6.19e-01 | 97.5% | 80.0% |
| 3604412 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.74 | 53.0 | 5.84e-01 | 87.7% | 90.0% |
| 5029853 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.74 | 48.0 | 4.93e-01 | 87.7% | 67.5% |
| 5031484 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.74 | 51.0 | 5.84e-01 | 87.7% | 95.6% |
| 4933369 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.73 | 68.0 | 6.67e-01 | 97.5% | 93.1% |
| 4406356 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.73 | 68.0 | 6.73e-01 | 98.4% | 99.2% |
| 4940945 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.72 | 67.0 | 6.18e-01 | 100.0% | 84.5% |
| 3174942 | 242.1.1.3 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › Hom_end | 0.72 | 65.0 | 6.62e-01 | 100.0% | 97.5% |
| 4933757 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.72 | 67.0 | 6.60e-01 | 100.0% | 96.9% |
| 5013813 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.72 | 67.0 | 6.22e-01 | 99.2% | 81.3% |
| 4200948 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.72 | 46.0 | 5.08e-01 | 87.7% | 80.0% |
| 4980064 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.71 | 67.0 | 5.90e-01 | 99.2% | 74.7% |
| 4998931 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.71 | 66.0 | 5.84e-01 | 99.2% | 73.4% |
| 5027605 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.70 | 46.0 | 5.31e-01 | 86.9% | 94.1% |
| 5027492 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.70 | 64.0 | 6.10e-01 | 96.7% | 83.6% |
| 4541172 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.69 | 64.0 | 6.31e-01 | 97.5% | 92.3% |
| 4440183 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.69 | 60.0 | 6.31e-01 | 91.8% | 100.0% |
| 4509301 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.69 | 59.0 | 5.28e-01 | 91.0% | 68.1% |
| 3251478 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.68 | 55.0 | 5.43e-01 | 89.3% | 80.0% |
| 4236039 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.66 | 52.0 | 5.21e-01 | 94.3% | 80.8% |
| 4997275 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.64 | 57.0 | 5.57e-01 | 95.1% | 91.5% |
| 4336917 | 2003.1.5.179 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 | 0.61 | 38.0 | 3.23e-01 | 84.4% | 39.5% |
| 3164985 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.59 | 35.0 | 3.24e-01 | 78.7% | 45.0% |
| 3964190 | 310.3.1.3 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PilN | 0.58 | 36.0 | 3.28e-01 | 77.9% | 45.5% |
| 3216998 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.57 | 39.0 | 4.05e-01 | 90.2% | 75.5% |
| 3973260 | 310.3.1.3 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PilN | 0.57 | 37.0 | 3.69e-01 | 77.9% | 62.4% |
| 4268592 | 2003.1.5.23 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_4 | 0.55 | 43.0 | 3.59e-01 | 91.0% | 49.5% |
| 4046539 | 2003.1.5.23 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_4 | 0.54 | 42.0 | 3.44e-01 | 91.0% | 45.0% |
| 5027561 | 310.3.1.3 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PilN | 0.52 | 37.0 | 3.67e-01 | 78.7% | 70.4% |
D6
medium
residues 1144-1197_1221-1300
D7
medium
residues 1301-1445
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 31.0 | 3.49e-01 | 82.8% | 56.2% |
| 1sdiA00 | 1.10.3890.10 | Mainly Alpha › Orthogonal Bundle › YcfC-like › HflD-like | 0.60 | 46.0 | 4.05e-01 | 80.7% | 97.2% |
| 4iu9A00 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.52 | 45.0 | 3.33e-01 | 95.2% | 44.7% |
| 1pw4A02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.51 | 44.0 | 3.89e-01 | 93.1% | 76.4% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4988067 | 1079.1.1.11 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › NicO | 0.60 | 51.0 | 4.48e-01 | 93.1% | 84.4% |
| 3988265 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.60 | 48.0 | 4.25e-01 | 86.2% | 97.7% |
| 4155141 | 1079.1.1.14 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › MarC | 0.60 | 51.0 | 4.67e-01 | 93.8% | 86.7% |
| 4958934 | 1079.1.1.8 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › LysE | 0.58 | 50.0 | 4.60e-01 | 93.1% | 91.6% |
| 4238557 | 1188.1.1.3 ↗ | alpha bundles › ZIP zinc transporter › ZIP zinc transporter › ZIP zinc transporter › Mntp | 0.58 | 49.0 | 4.61e-01 | 92.4% | 87.8% |
| 5064135 | 5051.1.1.3 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SSF | 0.58 | 51.0 | 3.50e-01 | 95.9% | 70.1% |
| 4665328 | 1079.1.1.13 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Mntp | 0.58 | 50.0 | 4.85e-01 | 93.1% | 88.7% |
| 3800965 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 43.0 | 4.70e-01 | 85.5% | 92.5% |
| 4963221 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.57 | 46.0 | 4.01e-01 | 86.2% | 97.3% |
| 4554168 | 1079.1.1.13 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Mntp | 0.56 | 48.0 | 4.54e-01 | 93.8% | 86.9% |
| 3164389 | 1079.1.1.11 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › NicO | 0.55 | 48.0 | 4.08e-01 | 95.2% | 84.6% |
| 4958586 | 1079.1.1.5 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DsbD_2 | 0.55 | 47.0 | 4.12e-01 | 93.8% | 96.4% |
| 4169514 | 5050.1.1.54 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Mntp | 0.54 | 46.0 | 4.29e-01 | 93.8% | 88.1% |
| 4031366 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.54 | 44.0 | 3.78e-01 | 86.2% | 96.2% |
| 3919404 | 5050.1.1.33 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_5 | 0.54 | 39.0 | 2.75e-01 | 73.8% | 56.6% |
| 5053898 | 3565.1.1.1 ↗ | alpha bundles › Na/H pumping membrane integral pyrophosphatase › Na/H pumping membrane integral pyrophosphatase › Na/H pumping membrane integral pyrophosphatase › H_PPase | 0.53 | 46.0 | 3.05e-01 | 97.9% | 95.9% |
| 4009351 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.51 | 43.0 | 4.01e-01 | 93.8% | 82.0% |
| 5026252 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.51 | 43.0 | 3.82e-01 | 93.8% | 74.0% |
| 3664210 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.50 | 39.0 | 3.21e-01 | 83.4% | 90.2% |
| 5051621 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.50 | 42.0 | 3.31e-01 | 91.7% | 74.6% |
D8
medium
residues 1446-1523
Domain cluster:
representative
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xrsB01 | 3.30.30.60 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain | 0.73 | 47.0 | 5.49e-01 | 85.9% | 100.0% |
| 4evuB00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.73 | 49.0 | 5.17e-01 | 88.5% | 79.4% |
| 3e3xA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 47.0 | 4.46e-01 | 93.6% | 56.4% |
| 1go3E02 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.70 | 60.0 | 5.97e-01 | 94.9% | 97.5% |
| 2wbmA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 45.0 | 4.71e-01 | 92.3% | 72.9% |
| 7d58G01 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.68 | 57.0 | 5.84e-01 | 92.3% | 100.0% |
| 3ayhB01 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.67 | 58.0 | 5.78e-01 | 96.2% | 100.0% |
| 1darA05 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 42.0 | 4.10e-01 | 93.6% | 59.8% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.64 | 50.0 | 5.28e-01 | 98.7% | 98.5% |
| 3i4hX02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 52.0 | 4.78e-01 | 94.9% | 78.8% |
| 2pn5A10 | 2.60.40.690 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain | 0.62 | 44.0 | 3.60e-01 | 96.2% | 39.7% |
| 3tviA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.62 | 42.0 | 3.37e-01 | 88.5% | 34.6% |
| 1u6mA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 42.0 | 3.19e-01 | 70.5% | 51.9% |
| 4c98A02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 52.0 | 4.35e-01 | 96.2% | 81.0% |
| 2e7vA01 | 3.30.70.960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain | 0.60 | 50.0 | 4.62e-01 | 94.9% | 83.8% |
| 3n79A01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.60 | 40.0 | 4.01e-01 | 91.0% | 67.9% |
| 3qfwA01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.59 | 49.0 | 4.50e-01 | 94.9% | 69.6% |
| 3ky8A01 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.59 | 40.0 | 3.09e-01 | 91.0% | 31.6% |
| 7yj5A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.58 | 44.0 | 3.62e-01 | 84.6% | 100.0% |
| 6a2bB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 41.0 | 3.96e-01 | 96.2% | 63.8% |
| 3cb0D00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 48.0 | 3.88e-01 | 94.9% | 64.6% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.57 | 48.0 | 4.11e-01 | 92.3% | 59.2% |
| 2ewhA01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.57 | 38.0 | 3.72e-01 | 89.7% | 62.4% |
| 2aneH00 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.57 | 48.0 | 4.30e-01 | 93.6% | 71.6% |
| 7cayA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.56 | 45.0 | 4.23e-01 | 92.3% | 69.0% |
| 1yaxB00 | 3.30.450.140 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PhoQ sensor domain | 0.56 | 41.0 | 3.51e-01 | 79.5% | 94.8% |
| 1j5uA01 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.56 | 43.0 | 3.88e-01 | 87.2% | 98.3% |
| 2w8eA00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.56 | 48.0 | 3.64e-01 | 100.0% | 47.3% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 47.0 | 3.66e-01 | 94.9% | 62.2% |
| 4e9lA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 47.0 | 4.26e-01 | 94.9% | 78.3% |
| 1ao7B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 39.0 | 3.70e-01 | 97.4% | 60.0% |
| 1ve3A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 47.0 | 3.38e-01 | 92.3% | 54.2% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.55 | 46.0 | 4.20e-01 | 98.7% | 91.2% |
| 3eniC00 | 2.50.10.10 | Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A | 0.55 | 46.0 | 3.11e-01 | 100.0% | 44.1% |
| 2yweA04 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 49.0 | 4.28e-01 | 98.7% | 78.1% |
| 5ajiB03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 41.0 | 3.95e-01 | 96.2% | 70.5% |
| 3qkbA00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.53 | 44.0 | 4.18e-01 | 94.9% | 81.9% |
| 2bj0A00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.53 | 46.0 | 3.48e-01 | 100.0% | 46.8% |
| 1vr4E00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.53 | 42.0 | 4.01e-01 | 89.7% | 83.9% |
| 3dh0B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 44.0 | 3.32e-01 | 92.3% | 47.9% |
| 3pcoB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.52 | 44.0 | 4.21e-01 | 94.9% | 80.9% |
| 2fbjH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 35.0 | 3.62e-01 | 88.5% | 74.0% |
| 6vbkA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.52 | 41.0 | 3.74e-01 | 88.5% | 71.2% |
| 4af3A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 36.0 | 3.48e-01 | 84.6% | 63.6% |
| 3fncB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 38.0 | 3.09e-01 | 79.5% | 92.5% |
| 3b5iB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 40.0 | 2.85e-01 | 84.6% | 89.4% |
| 1ohgA01 | 3.30.2400.10 | Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › Major capsid protein gp5 | 0.51 | 40.0 | 3.38e-01 | 89.7% | 69.2% |
| 5ucoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 41.0 | 3.31e-01 | 87.2% | 60.1% |
| 5xoyB02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 3.79e-01 | 91.0% | 80.4% |
| 2w2sA00 | 3.10.460.20 | Alpha Beta › Roll › VSV matrix protein › Rhabdovirus matrix protein M2 | 0.50 | 41.0 | 3.39e-01 | 96.2% | 52.8% |
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.50 | 41.0 | 3.59e-01 | 94.9% | 100.0% |
| 2zzeA04 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.50 | 40.0 | 3.85e-01 | 91.0% | 94.7% |
| 4lniA02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.50 | 40.0 | 2.68e-01 | 88.5% | 59.3% |
| 2p4gA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.50 | 42.0 | 2.97e-01 | 93.6% | 35.9% |
| 4xt6A00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.50 | 42.0 | 2.98e-01 | 92.3% | 35.9% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5000808 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.75 | 47.0 | 5.70e-01 | 93.6% | 100.0% |
| 3333647 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.73 | 61.0 | 6.24e-01 | 91.0% | 100.0% |
| 4160926 | 304.24.1.6 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C | 0.72 | 47.0 | 4.86e-01 | 96.2% | 69.3% |
| 4947074 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.72 | 46.0 | 4.84e-01 | 92.3% | 72.9% |
| 3962758 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.71 | 47.0 | 4.23e-01 | 93.6% | 50.5% |
| 3704078 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.71 | 46.0 | 4.41e-01 | 94.9% | 57.8% |
| 4590232 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.69 | 57.0 | 4.87e-01 | 89.7% | 81.6% |
| 5064952 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.69 | 44.0 | 4.56e-01 | 91.0% | 68.0% |
| 4976637 | 2003.1.5.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 | 0.69 | 59.0 | 3.96e-01 | 94.9% | 25.8% |
| 4994786 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.69 | 56.0 | 5.71e-01 | 88.5% | 100.0% |
| 4002973 | 872.1.1.9 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › PF29479 | 0.68 | 59.0 | 5.55e-01 | 96.2% | 84.2% |
| 5050009 | 2003.1.5.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 | 0.68 | 52.0 | 3.55e-01 | 93.6% | 23.4% |
| 5063532 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.68 | 44.0 | 4.51e-01 | 93.6% | 69.3% |
| 143841 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.68 | 58.0 | 5.81e-01 | 94.9% | 100.0% |
| 3501878 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.67 | 57.0 | 5.87e-01 | 94.9% | 100.0% |
| 4026327 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.65 | 58.0 | 5.79e-01 | 100.0% | 100.0% |
| 4010562 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.65 | 42.0 | 4.27e-01 | 91.0% | 68.0% |
| 3929328 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.65 | 56.0 | 5.69e-01 | 94.9% | 100.0% |
| 4194796 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.64 | 53.0 | 4.54e-01 | 91.0% | 83.2% |
| 3715810 | 304.47.1.2 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › FAZ1_cons | 0.64 | 52.0 | 4.78e-01 | 96.2% | 68.6% |
| 3492448 | 872.3.1.7 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 | 0.63 | 52.0 | 4.86e-01 | 93.6% | 80.0% |
| 3974710 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.62 | 43.0 | 3.31e-01 | 93.6% | 32.0% |
| 3496203 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.62 | 52.0 | 4.82e-01 | 93.6% | 80.0% |
| 3591566 | 304.31.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase | 0.62 | 52.0 | 4.84e-01 | 94.9% | 78.0% |
| 3587262 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.61 | 50.0 | 4.59e-01 | 92.3% | 78.1% |
| 3915879 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.61 | 48.0 | 4.41e-01 | 96.2% | 64.5% |
| 4033765 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.60 | 46.0 | 4.38e-01 | 97.4% | 70.0% |
| 3591038 | 886.1.1.0 ↗ | a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain | 0.60 | 45.0 | 3.79e-01 | 88.5% | 46.4% |
| 3957946 | 256.1.1.12 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › SOUL | 0.60 | 46.0 | 4.40e-01 | 91.0% | 72.2% |
| 4101071 | 812.1.1.1 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE | 0.59 | 47.0 | 4.69e-01 | 88.5% | 91.3% |
| 3510623 | 872.3.1.7 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 | 0.59 | 49.0 | 4.20e-01 | 93.6% | 62.0% |
| 3234644 | 304.166.1.1 ↗ | a+b two layers › Alpha-beta plaits › Nup54 ferredoxin-like domain › Nup54 ferredoxin-like domain › DAG1 | 0.58 | 49.0 | 4.30e-01 | 92.3% | 68.7% |
| 3992387 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.58 | 47.0 | 4.82e-01 | 89.7% | 100.0% |
| 4022625 | 256.1.1.0 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like | 0.58 | 47.0 | 3.80e-01 | 89.7% | 100.0% |
| 3270041 | 872.3.1.7 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 | 0.58 | 47.0 | 4.36e-01 | 93.6% | 77.1% |
| 3193669 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 49.0 | 3.28e-01 | 94.9% | 43.8% |
| 3236767 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.57 | 46.0 | 4.40e-01 | 91.0% | 86.3% |
| 3178421 | 2003.1.5.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 | 0.57 | 46.0 | 2.99e-01 | 91.0% | 21.0% |
| 3275694 | 872.3.1.6 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_3 | 0.56 | 46.0 | 4.32e-01 | 93.6% | 73.0% |
| 4069303 | 304.153.1.1 ↗ | a+b two layers › Alpha-beta plaits › Collagenase G catalytic helper subdomain › Collagenase G catalytic helper subdomain › ColG_sub | 0.56 | 48.0 | 4.26e-01 | 98.7% | 90.8% |
| 3596628 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.56 | 48.0 | 3.13e-01 | 96.2% | 31.8% |
| 3591115 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.56 | 45.0 | 4.18e-01 | 92.3% | 70.0% |
| 3902949 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 48.0 | 3.42e-01 | 97.4% | 52.0% |
| 3709183 | 872.3.1.7 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 | 0.55 | 45.0 | 4.13e-01 | 93.6% | 72.7% |
| 3588078 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.55 | 45.0 | 4.39e-01 | 96.2% | 82.2% |
| 4945414 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.55 | 44.0 | 4.30e-01 | 92.3% | 86.7% |
| 3601153 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.55 | 48.0 | 3.19e-01 | 98.7% | 32.6% |
| 3446478 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 46.0 | 3.12e-01 | 94.9% | 36.4% |
| 4114985 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.55 | 43.0 | 4.08e-01 | 89.7% | 70.5% |
| 3374173 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.55 | 47.0 | 3.17e-01 | 96.2% | 35.8% |
| 3929879 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.54 | 48.0 | 3.79e-01 | 98.7% | 48.2% |
| 3599468 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 47.0 | 3.02e-01 | 97.4% | 30.7% |
| 3964748 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 45.0 | 4.15e-01 | 94.9% | 71.4% |
| 3412664 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 46.0 | 2.95e-01 | 96.2% | 28.2% |
| 5029745 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.54 | 45.0 | 4.55e-01 | 97.4% | 100.0% |
| 3273458 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 46.0 | 2.73e-01 | 97.4% | 16.9% |
| 180088 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.53 | 44.0 | 4.22e-01 | 94.9% | 84.6% |
| 4928234 | 304.133.1.0 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein | 0.53 | 46.0 | 4.60e-01 | 97.4% | 100.0% |
| 4554484 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.53 | 42.0 | 3.53e-01 | 94.9% | 49.0% |
| 3246527 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 44.0 | 2.97e-01 | 96.2% | 33.6% |
| 2898500 | 7581.1.1.6 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_C | 0.52 | 42.0 | 3.36e-01 | 89.7% | 60.9% |
| 3497037 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 44.0 | 2.91e-01 | 97.4% | 40.6% |
| 3778242 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 43.0 | 2.92e-01 | 96.2% | 35.9% |
| 4034116 | 886.1.1.3 ↗ | a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Cass2 | 0.51 | 40.0 | 3.31e-01 | 89.7% | 96.8% |
| 3798057 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.51 | 41.0 | 3.78e-01 | 96.2% | 67.3% |
| 3283493 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 42.0 | 2.88e-01 | 94.9% | 34.8% |
| 3532732 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 43.0 | 2.83e-01 | 97.4% | 29.4% |
| 3692598 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 43.0 | 3.22e-01 | 96.2% | 60.5% |
| 3820425 | 3758.1.1.105 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › Msl2-3_C | 0.50 | 40.0 | 3.74e-01 | 97.4% | 69.5% |
| 163852 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.50 | 42.0 | 2.97e-01 | 93.6% | 35.9% |
| 5073892 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.50 | 42.0 | 3.16e-01 | 92.3% | 42.6% |