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CG_2015-01t_scaffold_23_prodigal-single.1__X__X__00068
Bact-VirCG_2015-01t_scaffold_23_prodigal-single.1__X__X__00068
Identity
- Kingdom:
- phage
Quality
73.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-73
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mzkB03 | 1.20.58.940 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 44.0 | 4.50e-01 | 76.1% | 60.0% |
| 4l9mA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.70 | 53.0 | 4.37e-01 | 83.1% | 52.6% |
| 3l9tA01 | 1.10.1240.70 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.66 | 47.0 | 4.46e-01 | 77.5% | 63.9% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.63 | 51.0 | 4.88e-01 | 91.5% | 94.1% |
| 2jbyA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.63 | 48.0 | 4.02e-01 | 83.1% | 46.5% |
| 3gwlA00 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.62 | 50.0 | 4.42e-01 | 88.7% | 60.4% |
| 2ouwB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.62 | 46.0 | 3.76e-01 | 80.3% | 72.8% |
| 3qxfA00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.60 | 50.0 | 3.31e-01 | 95.8% | 45.1% |
| 1xouB00 | 6.10.250.190 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.58 | 39.0 | 3.77e-01 | 70.4% | 66.7% |
| 2o4cA03 | 3.30.1370.170 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Erythronate-4-phosphate dehydrogenase, dimerisation domain | 0.58 | 40.0 | 3.79e-01 | 71.8% | 85.2% |
| 4x5mA00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.57 | 48.0 | 4.61e-01 | 100.0% | 97.7% |
| 1iuqA01 | 1.10.1200.50 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal | 0.57 | 42.0 | 4.16e-01 | 91.5% | 75.0% |
| 7m2wE01 | 1.20.120.1900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain | 0.56 | 46.0 | 3.11e-01 | 95.8% | 45.5% |
| 3kztA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 45.0 | 3.71e-01 | 88.7% | 48.5% |
| 6ll8A01 | 3.90.1640.10 | Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › inorganic pyrophosphatase (n-terminal core) | 0.55 | 42.0 | 3.14e-01 | 81.7% | 40.9% |
| 7ce1A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 33.0 | 3.64e-01 | 83.1% | 80.8% |
| 2o5hA00 | 1.10.3510.10 | Mainly Alpha › Orthogonal Bundle › NMB0513-like › NMB0513-like | 0.54 | 44.0 | 3.75e-01 | 94.4% | 92.2% |
| 6orcB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 39.0 | 3.31e-01 | 81.7% | 64.9% |
| 1u2xA02 | 3.30.1110.20 | Alpha Beta › 2-Layer Sandwich › Adenosine kinase, small domain › | 0.51 | 41.0 | 3.46e-01 | 87.3% | 61.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3532935 | 109.4.1.1965 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28295 | 0.74 | 58.0 | 3.71e-01 | 88.7% | 17.4% |
| 3367270 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.74 | 60.0 | 3.83e-01 | 88.7% | 22.1% |
| 3926243 | 611.3.1.1 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 | 0.67 | 53.0 | 4.79e-01 | 87.3% | 64.0% |
| 3277195 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.60 | 39.0 | 4.31e-01 | 71.8% | 85.5% |
| 3825757 | 101.35.1.23 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate | 0.59 | 45.0 | 4.67e-01 | 84.5% | 100.0% |
| 3721242 | 6026.1.1.0 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain | 0.55 | 42.0 | 4.04e-01 | 85.9% | 94.0% |
| 3938475 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.50 | 36.0 | 3.61e-01 | 78.9% | 74.7% |