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CG_2015-01t_scaffold_23_prodigal-single.1__X__X__00111
Bact-VirCG_2015-01t_scaffold_23_prodigal-single.1__X__X__00111
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 36-129_262-285
Domain cluster:
rep: Filtrate_w_scaffold_1_prodigal-single.1__X__X__00368__D1-108_249-276
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04055.28 best | Radical_SAM | 45.5 | 1.30e-11 | 92.4% | 63.9% |
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4m7tA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.81 | 76.0 | 5.81e-01 | 100.0% | 83.3% |
| 5v1qB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.80 | 73.0 | 5.39e-01 | 97.5% | 99.0% |
| 2yx0A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.79 | 61.0 | 4.32e-01 | 79.7% | 41.4% |
| 6y1xB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 55.0 | 4.29e-01 | 93.2% | 82.9% |
| 1yh0A02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.62 | 43.0 | 3.81e-01 | 71.2% | 94.7% |
| 7e7gA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.61 | 47.0 | 3.60e-01 | 79.7% | 39.1% |
| 2b8tA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 46.0 | 4.32e-01 | 78.8% | 72.7% |
| 4bxoA01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 40.0 | 3.83e-01 | 92.4% | 59.3% |
| 7d73A01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.59 | 53.0 | 4.21e-01 | 98.3% | 97.0% |
| 1jztA00 | 3.40.50.10260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › YjeF N-terminal domain | 0.59 | 43.0 | 3.38e-01 | 74.6% | 54.7% |
| 1np7B01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.58 | 42.0 | 3.99e-01 | 73.7% | 97.1% |
| 1t6t200 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.58 | 40.0 | 4.20e-01 | 74.6% | 76.4% |
| 2e0iA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 41.0 | 3.99e-01 | 72.9% | 100.0% |
| 6l1kA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 43.0 | 3.74e-01 | 78.8% | 67.2% |
| 1svvA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.57 | 43.0 | 3.38e-01 | 79.7% | 45.6% |
| 4j2hA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 41.0 | 3.19e-01 | 75.4% | 41.7% |
| 4fhzA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 42.0 | 3.47e-01 | 79.7% | 76.8% |
| 5jicA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 39.0 | 3.37e-01 | 71.2% | 88.5% |
| 3bjrA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 36.0 | 2.86e-01 | 76.3% | 32.0% |
| 3mbhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 48.0 | 3.61e-01 | 94.9% | 92.4% |
| 3dnfA03 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.55 | 39.0 | 4.19e-01 | 74.6% | 85.9% |
| 7zllA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.55 | 49.0 | 3.76e-01 | 98.3% | 78.1% |
| 7zvjA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.55 | 49.0 | 3.86e-01 | 98.3% | 84.7% |
| 3ie7A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 47.0 | 3.46e-01 | 93.2% | 93.5% |
| 4htyA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 48.0 | 3.46e-01 | 96.6% | 60.9% |
| 4ceiB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 41.0 | 3.56e-01 | 79.7% | 73.9% |
| 2nlyA00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.54 | 47.0 | 3.87e-01 | 95.8% | 66.2% |
| 7px8A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 40.0 | 3.12e-01 | 79.7% | 59.7% |
| 3pzgA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 46.0 | 3.29e-01 | 94.1% | 66.1% |
| 3e1uA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 43.0 | 3.76e-01 | 88.1% | 81.5% |
| 3umoA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 46.0 | 3.38e-01 | 93.2% | 94.5% |
| 3pga102 | 3.40.50.40 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 39.0 | 4.00e-01 | 92.4% | 78.9% |
| 1xfdA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 40.0 | 3.13e-01 | 79.7% | 75.7% |
| 1qwjB00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 48.0 | 3.84e-01 | 99.2% | 85.2% |
| 3nhvC01 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.53 | 38.0 | 3.85e-01 | 95.8% | 74.2% |
| 1xdpA03 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.52 | 45.0 | 3.88e-01 | 99.2% | 59.0% |
| 3ecsD02 | 3.40.50.10470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 | 0.52 | 48.0 | 4.01e-01 | 100.0% | 84.2% |
| 2hu8A02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 39.0 | 3.06e-01 | 79.7% | 69.0% |
| 1t1jA00 | 3.40.50.10400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein PA1492 | 0.52 | 36.0 | 3.67e-01 | 72.9% | 93.3% |
| 5gujA02 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.51 | 43.0 | 4.24e-01 | 94.1% | 84.0% |
| 3w0lD02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.51 | 44.0 | 3.18e-01 | 94.9% | 71.3% |
| 4zemA02 | 3.40.50.10470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 | 0.51 | 46.0 | 4.11e-01 | 100.0% | 89.9% |
| 2bd0A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 45.0 | 3.60e-01 | 98.3% | 96.2% |
| 2y92A00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.50 | 37.0 | 3.62e-01 | 79.7% | 70.9% |
| 1p3y100 | 3.40.50.1950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like | 0.50 | 45.0 | 4.03e-01 | 100.0% | 98.2% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4958130 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.83 | 79.0 | 5.46e-01 | 100.0% | 81.7% |
| 4934129 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.82 | 78.0 | 5.40e-01 | 100.0% | 85.8% |
| 3957000 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.82 | 76.0 | 4.99e-01 | 97.5% | 83.4% |
| 5054052 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.82 | 78.0 | 5.37e-01 | 100.0% | 80.6% |
| 4946871 | 2002.1.1.224 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM | 0.82 | 78.0 | 5.30e-01 | 100.0% | 85.1% |
| 4955597 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.82 | 78.0 | 5.34e-01 | 100.0% | 82.5% |
| 4987225 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.82 | 77.0 | 5.29e-01 | 99.2% | 83.9% |
| 5050328 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.82 | 77.0 | 5.52e-01 | 100.0% | 76.5% |
| 4668444 | 2002.1.1.125 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,SPASM | 0.81 | 76.0 | 5.28e-01 | 99.2% | 83.7% |
| 5012686 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.81 | 77.0 | 5.22e-01 | 100.0% | 78.0% |
| 5047651 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.81 | 75.0 | 5.05e-01 | 97.5% | 89.2% |
| 5016066 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.81 | 77.0 | 5.50e-01 | 100.0% | 83.6% |
| 5071874 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.81 | 74.0 | 5.24e-01 | 96.6% | 87.6% |
| 4941152 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.81 | 76.0 | 5.25e-01 | 100.0% | 80.6% |
| 4971215 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.81 | 76.0 | 5.22e-01 | 100.0% | 80.0% |
| 3388038 | 2002.1.1.232 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 | 0.81 | 76.0 | 5.51e-01 | 100.0% | 76.8% |
| 1106783 | 2002.1.1.125 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,SPASM | 0.81 | 76.0 | 5.81e-01 | 100.0% | 83.3% |
| 4948142 | 2002.1.1.224 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM | 0.80 | 75.0 | 5.20e-01 | 100.0% | 81.7% |
| 3388454 | 2002.1.1.125 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,SPASM | 0.80 | 75.0 | 5.54e-01 | 100.0% | 90.0% |
| 5043714 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.80 | 74.0 | 5.14e-01 | 100.0% | 78.3% |
| 5058697 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.79 | 75.0 | 5.23e-01 | 100.0% | 85.7% |
| 5046504 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.79 | 74.0 | 5.23e-01 | 100.0% | 84.8% |
| 4969017 | 2002.1.1.224 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM | 0.79 | 74.0 | 5.15e-01 | 100.0% | 91.4% |
| 4128825 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.79 | 73.0 | 5.26e-01 | 100.0% | 79.7% |
| 3839000 | 2002.1.1.224 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM | 0.78 | 57.0 | 4.32e-01 | 74.6% | 89.2% |
| 5022715 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.78 | 73.0 | 5.38e-01 | 100.0% | 85.0% |
| 3975681 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.76 | 70.0 | 5.24e-01 | 100.0% | 86.8% |
| None | — | 0.74 | 54.0 | 4.10e-01 | 76.3% | 45.6% | |
| 5015420 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.74 | 56.0 | 3.86e-01 | 79.7% | 35.3% |
| 4991816 | 2007.1.11.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains | 0.73 | 41.0 | 3.98e-01 | 76.3% | 50.0% |
| 4936017 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.72 | 55.0 | 4.15e-01 | 78.8% | 47.9% |
| 4107914 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 64.0 | 4.85e-01 | 95.8% | 85.1% |
| 4944822 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.69 | 61.0 | 4.82e-01 | 94.1% | 87.4% |
| 5066534 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 61.0 | 4.67e-01 | 94.9% | 80.0% |
| 4038605 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 60.0 | 4.63e-01 | 94.1% | 80.8% |
| 4985797 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.67 | 61.0 | 4.65e-01 | 96.6% | 96.4% |
| 5051260 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.66 | 59.0 | 4.48e-01 | 94.9% | 86.2% |
| 3199565 | 207.1.1.309 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_15 | 0.66 | 42.0 | 2.90e-01 | 94.1% | 18.5% |
| 5057179 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.66 | 50.0 | 4.57e-01 | 79.7% | 96.1% |
| 3930886 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.65 | 46.0 | 3.60e-01 | 79.7% | 35.8% |
| 5021164 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.64 | 58.0 | 4.26e-01 | 99.2% | 84.3% |
| 3759530 | 148.1.3.208 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_NAV1 | 0.64 | 44.0 | 3.32e-01 | 79.7% | 30.2% |
| 3706311 | 247.1.1.8 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL,Lactamase_B_6 | 0.63 | 40.0 | 3.20e-01 | 74.6% | 34.1% |
| 3613184 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.61 | 43.0 | 3.74e-01 | 72.9% | 55.6% |
| 3593609 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 46.0 | 3.46e-01 | 79.7% | 59.3% |
| 3936276 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.60 | 46.0 | 3.66e-01 | 79.7% | 51.1% |
| 4998939 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.59 | 46.0 | 4.09e-01 | 84.7% | 72.0% |
| 4001523 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.58 | 41.0 | 3.97e-01 | 72.9% | 97.0% |
| 3369678 | 7542.1.2.1 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › Aconitase | 0.57 | 46.0 | 4.75e-01 | 86.4% | 97.3% |
| 3979932 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.57 | 51.0 | 3.70e-01 | 100.0% | 64.3% |
| 4995748 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.56 | 50.0 | 3.90e-01 | 98.3% | 82.9% |
| 5015223 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.56 | 42.0 | 3.90e-01 | 79.7% | 79.4% |
| 3232107 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.55 | 42.0 | 3.24e-01 | 79.7% | 53.8% |
| 4326257 | 2006.1.3.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 | 0.55 | 41.0 | 4.19e-01 | 77.1% | 92.0% |
| 4229738 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.55 | 41.0 | 4.19e-01 | 77.1% | 92.0% |
| 3373305 | 2004.1.1.474 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N, MMR_HSR1 | 0.55 | 40.0 | 3.68e-01 | 77.1% | 91.3% |
| 3284356 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.55 | 48.0 | 3.80e-01 | 99.2% | 94.6% |
| 3288349 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.54 | 49.0 | 4.27e-01 | 100.0% | 84.4% |
| 1181023 | 7516.1.1.6 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 | 0.54 | 48.0 | 4.83e-01 | 96.6% | 98.3% |
| 4966509 | 2007.9.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 | 0.54 | 41.0 | 3.91e-01 | 79.7% | 74.1% |
| 3279156 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 38.0 | 3.30e-01 | 94.9% | 48.9% |
| 3690627 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.52 | 48.0 | 3.73e-01 | 100.0% | 86.8% |
| 3852864 | 2492.1.1.23 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › NAD2 | 0.52 | 42.0 | 3.72e-01 | 87.3% | 80.0% |
| 3902230 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.52 | 46.0 | 3.95e-01 | 94.1% | 87.2% |
| 3432581 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.52 | 47.0 | 3.27e-01 | 100.0% | 54.4% |
| 3732372 | 7579.1.1.47 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › BD-FAE | 0.52 | 45.0 | 3.36e-01 | 94.9% | 73.6% |
| 10093 | 2007.15.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › DUF1937 | 0.52 | 36.0 | 3.67e-01 | 72.9% | 93.3% |
| 3385824 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.52 | 44.0 | 4.42e-01 | 100.0% | 90.8% |
| 3835177 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.52 | 42.0 | 3.55e-01 | 89.0% | 89.3% |
| 5071151 | 7517.1.1.1 ↗ | a/b three-layered sandwiches › Nucleoside hydrolase › Nucleoside hydrolase › Nucleoside hydrolase › IU_nuc_hydro | 0.51 | 45.0 | 3.37e-01 | 98.3% | 93.9% |
| 3290747 | 7579.1.1.47 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › BD-FAE | 0.51 | 44.0 | 3.44e-01 | 94.1% | 81.9% |
| 5023632 | 2488.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › DUF2122 | 0.51 | 46.0 | 4.23e-01 | 100.0% | 85.8% |
D2
medium
residues 130-261
Domain cluster:
representative
CATH (54)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3t7vA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.77 | 70.0 | 5.15e-01 | 99.2% | 50.7% |
| 1kfwA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.73 | 66.0 | 4.79e-01 | 100.0% | 78.0% |
| 2dskA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.71 | 62.0 | 4.76e-01 | 94.7% | 59.0% |
| 2y1hB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.68 | 61.0 | 4.91e-01 | 100.0% | 80.0% |
| 4ur7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 62.0 | 4.72e-01 | 100.0% | 57.8% |
| 3chvA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 61.0 | 4.81e-01 | 100.0% | 65.9% |
| 1vhnA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 61.0 | 5.02e-01 | 100.0% | 63.2% |
| 6dvhB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 61.0 | 4.34e-01 | 100.0% | 53.6% |
| 3go2A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.67 | 61.0 | 4.81e-01 | 100.0% | 66.2% |
| 3ro6A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.67 | 58.0 | 4.74e-01 | 93.9% | 56.7% |
| 1cpyA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.66 | 59.0 | 4.38e-01 | 100.0% | 92.0% |
| 1qtwA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.66 | 59.0 | 4.63e-01 | 100.0% | 80.0% |
| 3a24A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 59.0 | 4.69e-01 | 100.0% | 78.0% |
| 1ad1A00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.65 | 59.0 | 4.71e-01 | 100.0% | 59.1% |
| 3ugvA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.65 | 60.0 | 4.90e-01 | 100.0% | 65.3% |
| 3ik4A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.65 | 56.0 | 4.63e-01 | 94.7% | 68.0% |
| 3kzpA00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.65 | 59.0 | 4.89e-01 | 100.0% | 61.5% |
| 1e6pB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 58.0 | 4.28e-01 | 100.0% | 78.4% |
| 1losA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 58.0 | 4.95e-01 | 100.0% | 67.6% |
| 4hd5A02 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.64 | 55.0 | 4.70e-01 | 94.7% | 90.4% |
| 7bsrA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 57.0 | 4.33e-01 | 99.2% | 51.1% |
| 3tfxA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 58.0 | 4.81e-01 | 100.0% | 69.3% |
| 1vqtA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 58.0 | 5.12e-01 | 100.0% | 75.4% |
| 1jqdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 43.0 | 3.34e-01 | 100.0% | 31.8% |
| 4a91A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.62 | 37.0 | 3.58e-01 | 77.3% | 51.3% |
| 3nv7A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.61 | 37.0 | 3.49e-01 | 72.0% | 50.3% |
| 3jw8B00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 53.0 | 4.24e-01 | 100.0% | 88.8% |
| 3milB00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.60 | 53.0 | 4.41e-01 | 97.7% | 84.9% |
| 2c4kA02 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 49.0 | 4.93e-01 | 91.7% | 88.9% |
| 3n0xA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 51.0 | 4.73e-01 | 93.9% | 86.6% |
| 1yoeA00 | 3.90.245.10 | Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like | 0.58 | 51.0 | 3.95e-01 | 97.7% | 96.0% |
| 4mzyA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 48.0 | 4.50e-01 | 93.9% | 72.6% |
| 1ezrA00 | 3.90.245.10 | Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like | 0.57 | 49.0 | 3.75e-01 | 93.9% | 95.5% |
| 4bubA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.56 | 49.0 | 4.14e-01 | 97.0% | 83.9% |
| 6ahuI01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 48.0 | 4.07e-01 | 95.5% | 55.8% |
| 1r0sA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 42.0 | 4.29e-01 | 80.3% | 83.3% |
| 1r1dA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 48.0 | 4.07e-01 | 100.0% | 91.7% |
| 4eygA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 48.0 | 4.43e-01 | 93.9% | 88.1% |
| 3oesA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 48.0 | 4.52e-01 | 94.7% | 94.3% |
| 4zciA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 48.0 | 4.37e-01 | 95.5% | 93.7% |
| 2bgiA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.55 | 41.0 | 3.93e-01 | 84.8% | 67.5% |
| 4pioA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 46.0 | 4.22e-01 | 93.9% | 72.9% |
| 4rctA01 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.54 | 44.0 | 3.94e-01 | 86.4% | 93.0% |
| 4cujA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 46.0 | 4.07e-01 | 93.2% | 80.1% |
| 3a1fA00 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.54 | 42.0 | 3.92e-01 | 87.9% | 66.9% |
| 7va8A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 49.0 | 3.87e-01 | 99.2% | 62.2% |
| 4mj3B00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 46.0 | 3.69e-01 | 100.0% | 83.1% |
| 1j24A00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 39.0 | 3.94e-01 | 75.8% | 85.0% |
| 1ehyA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 46.0 | 3.74e-01 | 100.0% | 93.6% |
| 4wqmA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.53 | 45.0 | 4.54e-01 | 100.0% | 89.5% |
| 3vywA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 46.0 | 3.88e-01 | 97.7% | 57.0% |
| 1qo0D01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 41.0 | 4.17e-01 | 95.5% | 85.0% |
| 3n0wA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 44.0 | 4.49e-01 | 93.2% | 93.2% |
| 1qfjA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.50 | 43.0 | 4.28e-01 | 100.0% | 88.9% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051987 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.85 | 81.0 | 5.84e-01 | 100.0% | 43.4% |
| 5052434 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.81 | 64.0 | 4.96e-01 | 81.8% | 54.3% |
| 4975797 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.80 | 75.0 | 5.70e-01 | 100.0% | 57.2% |
| 5044211 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.78 | 73.0 | 5.00e-01 | 100.0% | 40.7% |
| 3346249 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.75 | 64.0 | 4.96e-01 | 90.9% | 50.9% |
| 2096142 | 2002.1.1.125 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,SPASM | 0.75 | 66.0 | 4.72e-01 | 93.2% | 68.1% |
| 3603477 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.74 | 70.0 | 5.30e-01 | 100.0% | 48.6% |
| 5010430 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 66.0 | 4.88e-01 | 100.0% | 39.6% |
| 5059146 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 68.0 | 4.75e-01 | 100.0% | 70.0% |
| 4013407 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.72 | 66.0 | 5.01e-01 | 100.0% | 81.3% |
| None | — | 0.71 | 65.0 | 4.97e-01 | 100.0% | 70.2% | |
| 5052161 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.71 | 65.0 | 4.82e-01 | 100.0% | 50.3% |
| 5053419 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 66.0 | 4.81e-01 | 100.0% | 47.2% |
| 3627918 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.71 | 65.0 | 4.96e-01 | 100.0% | 84.1% |
| 3628496 | 2002.1.1.33 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_20 | 0.70 | 64.0 | 4.26e-01 | 100.0% | 52.8% |
| 4978190 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.70 | 64.0 | 5.10e-01 | 100.0% | 69.6% |
| 4070012 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 66.0 | 4.84e-01 | 100.0% | 49.1% |
| 5056316 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 65.0 | 4.68e-01 | 100.0% | 53.2% |
| 5001083 | 2002.1.1.224 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM | 0.70 | 63.0 | 4.72e-01 | 100.0% | 94.8% |
| 4566493 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.70 | 63.0 | 4.59e-01 | 100.0% | 58.9% |
| 4972626 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 65.0 | 4.98e-01 | 100.0% | 54.5% |
| 5076147 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.69 | 62.0 | 5.07e-01 | 100.0% | 73.2% |
| 4935059 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.69 | 62.0 | 5.03e-01 | 100.0% | 65.7% |
| 3038269 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.69 | 62.0 | 4.84e-01 | 100.0% | 72.7% |
| 4875495 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 63.0 | 5.13e-01 | 100.0% | 80.3% |
| 5047183 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 63.0 | 4.94e-01 | 100.0% | 55.6% |
| 4997473 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 62.0 | 4.78e-01 | 100.0% | 91.4% |
| 1030291 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.68 | 61.0 | 4.68e-01 | 100.0% | 53.6% |
| 167501 | 2002.1.1.139 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › BKACE | 0.68 | 61.0 | 4.81e-01 | 100.0% | 65.9% |
| 4990263 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.67 | 43.0 | 4.34e-01 | 77.3% | 64.2% |
| 3964172 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.66 | 59.0 | 4.80e-01 | 100.0% | 72.5% |
| 3973116 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.66 | 55.0 | 4.21e-01 | 93.2% | 42.4% |
| 3598601 | 2002.1.1.96 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › S-methyl_trans | 0.66 | 56.0 | 4.20e-01 | 93.2% | 41.8% |
| 4525959 | 2002.1.1.48 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FMN_dh | 0.65 | 59.0 | 4.28e-01 | 100.0% | 50.7% |
| 3972136 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.64 | 58.0 | 4.71e-01 | 100.0% | 55.5% |
| 4091580 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.64 | 58.0 | 4.81e-01 | 100.0% | 72.3% |
| 4448185 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.63 | 57.0 | 5.01e-01 | 100.0% | 75.5% |
| 4358885 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.63 | 43.0 | 3.30e-01 | 100.0% | 31.1% |
| 4580734 | 2002.1.1.97 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TMP-TENI | 0.63 | 56.0 | 4.76e-01 | 100.0% | 60.9% |
| 4662471 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.63 | 44.0 | 4.39e-01 | 100.0% | 70.4% |
| 5024568 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.62 | 56.0 | 4.83e-01 | 100.0% | 67.9% |
| 3657039 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.62 | 56.0 | 3.96e-01 | 100.0% | 60.5% |
| 3664605 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.61 | 55.0 | 5.07e-01 | 100.0% | 96.0% |
| 411294 | 2002.1.1.36 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind | 0.61 | 55.0 | 4.34e-01 | 100.0% | 75.1% |
| 3690227 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.60 | 52.0 | 3.87e-01 | 94.7% | 85.2% |
| 5016677 | 2004.1.1.319 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF815 | 0.60 | 54.0 | 4.51e-01 | 98.5% | 99.6% |
| 3466745 | 207.1.1.192 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At1g61320_AtMIF1, LRR_At5g56370 | 0.60 | 53.0 | 3.79e-01 | 99.2% | 52.7% |
| 3993695 | 2007.5.1.23 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SGNH | 0.59 | 53.0 | 4.62e-01 | 100.0% | 97.5% |
| 3477541 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.58 | 51.0 | 4.18e-01 | 96.2% | 82.1% |
| 4549416 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.58 | 51.0 | 4.49e-01 | 100.0% | 72.1% |
| 3295624 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.57 | 50.0 | 3.90e-01 | 95.5% | 88.3% |
| 141503 | 7517.1.1.1 ↗ | a/b three-layered sandwiches › Nucleoside hydrolase › Nucleoside hydrolase › Nucleoside hydrolase › IU_nuc_hydro | 0.57 | 50.0 | 3.80e-01 | 94.7% | 95.8% |
| 4165258 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.57 | 47.0 | 4.56e-01 | 100.0% | 78.7% |
| 3804894 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.57 | 50.0 | 3.52e-01 | 98.5% | 48.3% |
| 3827686 | 207.1.1.473 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_2, FBD, LRR_At1g61320_AtMIF1 | 0.57 | 49.0 | 4.06e-01 | 97.0% | 95.6% |
| 3738575 | 2003.1.5.71 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_33 | 0.57 | 45.0 | 3.46e-01 | 85.6% | 77.2% |
| 5046783 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.56 | 48.0 | 4.44e-01 | 94.7% | 100.0% |
| 5033555 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.55 | 40.0 | 3.83e-01 | 75.0% | 72.3% |
| 5039809 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.55 | 48.0 | 3.89e-01 | 100.0% | 83.6% |
| 3220075 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.55 | 43.0 | 4.29e-01 | 90.2% | 78.6% |
| 3564857 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.55 | 46.0 | 4.14e-01 | 90.2% | 66.7% |
| 3802385 | 207.1.1.116 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 | 0.54 | 48.0 | 3.99e-01 | 97.7% | 97.9% |
| 3200576 | 2006.1.1.28 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › APP1_cat | 0.54 | 48.0 | 4.05e-01 | 99.2% | 89.2% |
| 4016890 | 2006.1.1.28 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › APP1_cat | 0.53 | 47.0 | 3.85e-01 | 99.2% | 80.8% |
| 3785857 | 7514.1.1.3 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 | 0.52 | 45.0 | 4.10e-01 | 100.0% | 71.3% |
| 3405466 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 45.0 | 4.25e-01 | 95.5% | 95.2% |
| 4978555 | 7514.1.1.8 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › DHODB_Fe-S_bind | 0.51 | 42.0 | 3.86e-01 | 100.0% | 66.3% |
| 5045647 | 7601.1.1.1 ↗ | a/b three-layered sandwiches › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lar_N | 0.51 | 41.0 | 3.36e-01 | 85.6% | 45.7% |
| 4257664 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.51 | 46.0 | 4.52e-01 | 100.0% | 97.9% |
| 4180643 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.51 | 43.0 | 4.25e-01 | 100.0% | 86.3% |
| 3965436 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.51 | 42.0 | 4.31e-01 | 99.2% | 91.5% |
| 3980169 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.50 | 42.0 | 4.22e-01 | 100.0% | 87.7% |