Back to structures

CG_2015-01t_scaffold_23_prodigal-single.1__X__X__00162

Bact-Vir

CG_2015-01t_scaffold_23_prodigal-single.1__X__X__00162

Identity

Kingdom:
phage

Quality

63.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 192-273
PDB
D2 medium residues 432-483
PDB
D3 medium residues 550-615
PDB
D4 medium residues 616-648_672-691
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00415.25 best RCC1 24.7 3.90e-05 60.4% 54.0%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dnuA00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.96 90.0 5.25e-01 100.0% 21.2%
4l1mB00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.94 88.0 5.12e-01 100.0% 23.0%
4jhnD00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.91 83.0 4.90e-01 100.0% 21.9%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4957807 5.1.4.669 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RLD 0.97 93.0 5.35e-01 100.0% 20.8%
3754283 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.96 91.0 5.29e-01 100.0% 21.6%
4072085 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.96 91.0 5.30e-01 100.0% 22.3%
3325130 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.96 91.0 5.22e-01 100.0% 20.5%
3274049 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.95 89.0 5.16e-01 100.0% 20.8%
3252696 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.94 89.0 5.11e-01 100.0% 20.2%
3329777 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.94 88.0 5.04e-01 100.0% 18.6%
3904256 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.93 87.0 4.96e-01 100.0% 18.4%
3769410 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.93 86.0 5.00e-01 100.0% 20.1%
3271911 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.93 86.0 4.98e-01 100.0% 21.0%
3717652 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.92 84.0 4.81e-01 100.0% 21.1%
3230192 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.91 84.0 4.86e-01 100.0% 19.5%
3347125 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.91 84.0 4.82e-01 100.0% 18.2%
4366069 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.91 84.0 4.90e-01 100.0% 21.9%
3392393 5.1.4.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1 0.90 82.0 4.83e-01 100.0% 21.9%
3195106 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.90 83.0 4.61e-01 100.0% 14.3%
3496134 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.90 83.0 4.91e-01 100.0% 23.6%
4014850 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.90 83.0 4.76e-01 100.0% 20.5%
3493810 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.89 83.0 4.69e-01 100.0% 17.1%
3632600 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.89 82.0 4.68e-01 100.0% 19.1%
3531907 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.89 82.0 4.77e-01 100.0% 23.6%
3228258 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.89 82.0 4.74e-01 100.0% 20.1%
3257404 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.89 81.0 4.62e-01 100.0% 23.2%
3715725 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.88 81.0 4.68e-01 100.0% 18.1%
3332231 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.88 80.0 4.89e-01 100.0% 26.2%
3592483 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.88 81.0 4.71e-01 100.0% 19.7%
3481182 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.87 80.0 4.63e-01 100.0% 21.0%
3201701 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.87 79.0 4.66e-01 100.0% 25.9%
3272357 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.86 77.0 4.56e-01 100.0% 21.9%
3233394 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.83 75.0 4.44e-01 100.0% 21.7%
3414523 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.80 72.0 4.20e-01 100.0% 21.3%
D5 medium residues 649-671_692-896
PDB
Pfam (8)
AccessionNameScoreE-valueQ covHMM cov
PF00415.25 best RCC1 39.8 7.50e-10 21.1% 88.0%
PF00415.25 RCC1 26.0 1.60e-05 21.1% 96.0%
PF00415.25 RCC1 42.5 1.10e-10 21.1% 98.0%
PF00415.25 RCC1 31.1 4.00e-07 14.9% 60.0%
PF13540.13 RCC1_2 34.8 1.50e-08 13.2% 93.3%
PF13540.13 RCC1_2 37.3 2.30e-09 13.2% 96.7%
PF13540.13 RCC1_2 27.6 2.70e-06 12.7% 93.3%
PF13540.13 RCC1_2 26.9 4.40e-06 11.4% 80.0%
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dnuA00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.96 93.0 7.62e-01 99.6% 69.1%
4l1mB00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.94 92.0 7.62e-01 99.6% 73.9%
1i2mB00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.94 92.0 7.38e-01 100.0% 69.8%
4o2wD00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.93 91.0 7.52e-01 100.0% 84.1%
3of7A00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.93 91.0 7.03e-01 100.0% 63.9%
4jhnD00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.93 90.0 7.49e-01 100.0% 84.7%
1jtdB00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.85 70.0 6.53e-01 99.6% 70.3%
7a0kA01 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.79 69.0 6.48e-01 98.7% 76.3%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.72 46.0 5.66e-01 82.9% 100.0%
1pguA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 57.0 5.32e-01 96.1% 71.2%
1k8kC00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 61.0 5.23e-01 95.6% 85.3%
7c38B01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.66 62.0 5.47e-01 99.6% 79.7%
8eg0B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 60.0 5.11e-01 99.6% 82.6%
3jb9L00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 60.0 5.46e-01 100.0% 84.0%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 59.0 5.15e-01 99.6% 84.5%
5ic7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 60.0 5.15e-01 100.0% 77.9%
4aezA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 59.0 5.21e-01 100.0% 78.2%
5hy7B02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 60.0 5.31e-01 100.0% 78.7%
2aq5A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 59.0 5.11e-01 100.0% 81.2%
4u1eI00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 59.0 5.18e-01 100.0% 79.7%
3jb9K01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 59.0 5.40e-01 100.0% 82.0%
4pswB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 59.0 4.99e-01 100.0% 80.1%
2ovrB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 59.0 5.11e-01 100.0% 80.2%
6m90A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 59.0 5.36e-01 100.0% 83.4%
3v7dD02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 59.0 5.05e-01 100.0% 83.9%
2i0rA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 59.0 5.05e-01 99.6% 70.6%
5tf2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 59.0 5.10e-01 100.0% 82.8%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 59.0 5.28e-01 100.0% 81.7%
3mmyA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 58.0 4.98e-01 100.0% 75.1%
8hmcA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 58.0 5.19e-01 100.0% 79.1%
4zovB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 58.0 4.85e-01 100.0% 83.1%
6fcvB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 58.0 4.89e-01 100.0% 72.3%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 58.0 4.71e-01 100.0% 72.2%
5hqgA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 58.0 5.09e-01 100.0% 77.5%
2hesX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 58.0 5.17e-01 99.6% 81.2%
3ijcA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 57.0 4.90e-01 100.0% 81.8%
1u4cB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 57.0 5.03e-01 100.0% 82.1%
4hdjA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 57.0 4.89e-01 100.0% 71.3%
1mg2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 56.0 4.66e-01 97.4% 73.0%
4i79A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 57.0 5.07e-01 100.0% 85.8%
8f5pC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 57.0 5.23e-01 100.0% 81.2%
4a2lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 57.0 5.10e-01 100.0% 80.6%
3odtA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 56.0 5.15e-01 99.6% 81.1%
7apkF01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 56.0 4.95e-01 100.0% 79.0%
4immA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 56.0 4.90e-01 100.0% 86.1%
5k19A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 54.0 4.54e-01 96.9% 70.7%
6yleA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 55.0 4.55e-01 100.0% 68.9%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 55.0 4.63e-01 99.6% 64.0%
3hrpA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 54.0 4.87e-01 100.0% 81.2%
2b5lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 52.0 4.36e-01 99.6% 84.8%
7b9cA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 51.0 4.36e-01 99.1% 90.4%
1r5mA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 51.0 4.45e-01 99.6% 85.8%
4ld1A00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.55 25.0 2.93e-01 71.9% 58.0%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.54 21.0 2.80e-01 79.8% 61.9%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3446387 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.96 94.0 7.41e-01 100.0% 64.3%
4957807 5.1.4.669 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RLD 0.96 94.0 7.62e-01 100.0% 79.2%
3530145 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.96 94.0 7.47e-01 100.0% 76.0%
3271911 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.96 94.0 7.51e-01 100.0% 71.0%
3273187 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.96 93.0 7.40e-01 100.0% 70.4%
3329777 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.95 93.0 7.32e-01 100.0% 74.0%
3474849 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.95 93.0 7.23e-01 100.0% 64.9%
3274049 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.95 93.0 7.52e-01 99.6% 70.5%
136950 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.95 93.0 7.62e-01 99.6% 71.0%
3347125 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.95 93.0 7.25e-01 100.0% 72.2%
3253333 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.95 93.0 7.21e-01 100.0% 67.9%
3368139 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.95 92.0 7.40e-01 99.6% 71.6%
3821018 145.1.1.66 alpha arrays › F-box domain › F-box domain › F-box domain › RCC1, RCC1_2, WD40_RLD 0.95 93.0 6.93e-01 100.0% 64.2%
3248946 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.95 93.0 7.46e-01 100.0% 68.2%
3508061 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.95 92.0 7.29e-01 99.6% 73.4%
3660142 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.95 92.0 7.30e-01 99.6% 69.9%
3615227 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.95 92.0 6.99e-01 100.0% 83.9%
3252696 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.95 92.0 7.32e-01 100.0% 74.3%
3769410 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.94 92.0 7.38e-01 100.0% 82.2%
3513225 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.94 92.0 7.47e-01 100.0% 83.9%
3531907 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.94 92.0 7.37e-01 99.6% 71.8%
3335019 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.94 92.0 7.30e-01 100.0% 72.3%
3445621 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.94 91.0 7.36e-01 99.6% 69.0%
3325130 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.94 92.0 7.36e-01 100.0% 66.3%
4011518 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.94 92.0 7.02e-01 100.0% 62.4%
3265365 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.94 92.0 7.30e-01 100.0% 83.5%
2117449 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.94 91.0 7.17e-01 100.0% 65.9%
3592483 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.93 91.0 7.37e-01 100.0% 84.2%
3844283 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.93 91.0 7.33e-01 100.0% 70.8%
4072085 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.93 91.0 7.57e-01 100.0% 85.1%
4366069 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.93 91.0 7.41e-01 100.0% 81.3%
3715725 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.93 91.0 7.12e-01 100.0% 77.1%
3275570 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.93 90.0 7.45e-01 100.0% 81.5%
3754283 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.93 91.0 7.47e-01 100.0% 82.7%
3273135 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.93 90.0 7.23e-01 99.6% 67.6%
3272357 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.93 90.0 7.36e-01 99.6% 66.7%
3261824 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.93 91.0 7.28e-01 100.0% 81.3%
3272908 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.93 90.0 7.11e-01 100.0% 83.3%
3405264 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.93 90.0 7.35e-01 100.0% 80.5%
3354167 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.92 90.0 7.19e-01 99.6% 68.6%
3705009 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.92 90.0 7.06e-01 99.6% 65.8%
3503505 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.92 90.0 7.05e-01 100.0% 64.0%
3601757 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.92 90.0 6.82e-01 100.0% 80.3%
3412375 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.92 90.0 7.02e-01 100.0% 76.7%
3701107 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.92 90.0 7.04e-01 100.0% 77.1%
3904256 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.92 90.0 6.95e-01 100.0% 74.9%
3496134 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.92 87.0 7.37e-01 97.4% 91.0%
3706181 5.1.4.44 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1_2 0.92 89.0 6.86e-01 100.0% 88.9%
3619361 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.92 89.0 7.24e-01 99.6% 65.0%
3493810 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.92 89.0 6.71e-01 100.0% 77.9%
3233394 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.91 89.0 7.37e-01 100.0% 85.3%
4030680 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.91 89.0 7.16e-01 100.0% 71.3%
3231016 5.1.4.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1 0.91 88.0 7.12e-01 99.6% 67.9%
4959392 5.1.4.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1 0.91 88.0 7.30e-01 99.6% 67.9%
3457333 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.91 88.0 7.03e-01 100.0% 74.1%
3701108 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.91 88.0 7.23e-01 100.0% 80.7%
3580959 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.91 88.0 7.08e-01 99.6% 68.7%
4000211 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.91 88.0 6.82e-01 100.0% 78.0%
3798493 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.91 88.0 6.95e-01 100.0% 78.1%
3621120 5.1.4.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1 0.91 88.0 7.17e-01 99.6% 71.5%
3257259 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.91 88.0 7.49e-01 99.6% 83.9%
3932476 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.90 87.0 7.05e-01 99.6% 69.2%
4029906 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.90 88.0 6.94e-01 100.0% 75.4%
3505084 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.90 88.0 7.12e-01 100.0% 83.6%
3250119 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.90 88.0 6.57e-01 100.0% 67.4%
3605599 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.90 87.0 6.64e-01 100.0% 86.1%
4030588 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.90 88.0 7.03e-01 100.0% 67.8%
4027946 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.90 87.0 7.01e-01 100.0% 80.0%
3922094 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.90 88.0 7.18e-01 100.0% 74.6%
3481182 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.90 87.0 6.86e-01 100.0% 69.6%
3230192 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.89 87.0 6.86e-01 100.0% 74.1%
4029622 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.88 85.0 6.79e-01 100.0% 64.4%
3438903 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.88 85.0 6.88e-01 100.0% 69.5%
3228258 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.88 85.0 6.76e-01 100.0% 82.6%
3260414 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.88 85.0 6.83e-01 100.0% 75.4%
3273221 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.87 84.0 6.84e-01 99.6% 67.1%
3705889 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.87 84.0 7.08e-01 99.6% 82.9%
3392393 5.1.4.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1 0.87 79.0 6.54e-01 94.3% 76.8%
3515770 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.86 84.0 7.51e-01 99.6% 93.9%
3994455 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.86 84.0 6.64e-01 100.0% 84.4%
3275978 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.86 84.0 7.02e-01 100.0% 83.1%
3616717 5.1.4.407 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, Alsin_RLD 0.86 83.0 6.53e-01 100.0% 85.5%
3739634 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.84 81.0 6.83e-01 99.6% 83.7%
3249503 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.84 81.0 6.43e-01 100.0% 70.6%
3791863 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.83 80.0 6.60e-01 99.6% 72.6%
4055253 5.1.4.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1 0.83 79.0 6.46e-01 99.6% 80.0%
3867302 5.1.4.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1 0.83 79.0 6.52e-01 99.6% 82.9%
3332231 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.83 80.0 7.26e-01 100.0% 83.4%
3741619 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.82 80.0 6.28e-01 100.0% 76.0%
3992808 5.1.4.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1 0.82 61.0 5.48e-01 86.0% 58.0%
3545608 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.82 79.0 6.49e-01 99.6% 74.4%
3799990 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.82 79.0 6.39e-01 100.0% 79.5%
3411699 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.82 79.0 6.48e-01 100.0% 85.1%
3925881 5.1.4.407 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, Alsin_RLD 0.81 78.0 6.34e-01 100.0% 86.7%
3786666 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.81 78.0 7.02e-01 100.0% 89.8%
3345838 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.80 77.0 6.62e-01 98.7% 99.7%
3240133 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.79 76.0 7.06e-01 100.0% 85.8%
3619501 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.79 76.0 6.75e-01 100.0% 99.3%
3629155 5.1.4.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1 0.78 71.0 5.95e-01 94.7% 88.1%
3584702 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.69 52.0 5.07e-01 76.8% 84.0%
D6 medium residues 914-1164_1229-1257
PDB
Pfam (10)
AccessionNameScoreE-valueQ covHMM cov
PF25390.2 best WD40_RLD 168.4 4.10e-49 100.0% 83.5%
PF00415.25 RCC1 31.7 2.50e-07 17.1% 98.0%
PF00415.25 RCC1 25.9 1.70e-05 16.4% 92.0%
PF00415.25 RCC1 29.8 1.00e-06 16.4% 86.0%
PF00415.25 RCC1 32.2 1.80e-07 15.4% 88.0%
PF13540.13 RCC1_2 22.4 1.20e-04 10.7% 93.3%
PF13540.13 RCC1_2 23.5 5.40e-05 10.7% 93.3%
PF13540.13 RCC1_2 24.9 1.90e-05 10.4% 76.7%
PF13540.13 RCC1_2 32.6 7.30e-08 10.4% 93.3%
PF00415.25 RCC1 27.7 4.50e-06 10.0% 56.0%
D7 medium residues 1165-1228
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00415.25 best RCC1 33.8 5.80e-08 75.0% 96.0%
PF13540.13 RCC1_2 26.6 5.60e-06 39.1% 70.0%