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CG_2015-01t_scaffold_23_prodigal-single.1__X__X__00185
Bact-VirCG_2015-01t_scaffold_23_prodigal-single.1__X__X__00185
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-63_136-172
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1frvA01 | 3.40.50.700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NADH:ubiquinone oxidoreductase-like, 20kDa subunit | 0.68 | 55.0 | 4.53e-01 | 87.8% | 91.0% |
| 4lhsA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.66 | 56.0 | 4.55e-01 | 93.9% | 98.9% |
| 6kv9A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 52.0 | 4.21e-01 | 85.7% | 95.4% |
| 2iz6A00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 52.0 | 4.47e-01 | 87.8% | 99.4% |
| 1u02A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.64 | 51.0 | 4.45e-01 | 86.7% | 96.1% |
| 4nicA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 53.0 | 4.99e-01 | 88.8% | 99.1% |
| 4e4yA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 50.0 | 3.78e-01 | 86.7% | 93.0% |
| 1qv9A01 | 3.40.50.10830 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) | 0.62 | 50.0 | 4.38e-01 | 88.8% | 89.6% |
| 1jqkA02 | 3.40.50.2030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 50.0 | 4.28e-01 | 89.8% | 81.1% |
| 7o62B01 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 48.0 | 4.39e-01 | 83.7% | 98.5% |
| 2b0cA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.61 | 47.0 | 4.35e-01 | 85.7% | 99.2% |
| 1egaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 49.0 | 4.02e-01 | 88.8% | 92.3% |
| 4g9bA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.60 | 48.0 | 4.19e-01 | 86.7% | 93.9% |
| 1vi6C01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.59 | 50.0 | 4.15e-01 | 98.0% | 69.7% |
| 3ksmA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 48.0 | 4.43e-01 | 89.8% | 94.4% |
| 4q37A00 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.59 | 42.0 | 4.01e-01 | 76.5% | 85.8% |
| 4s1wB02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.58 | 47.0 | 4.18e-01 | 89.8% | 88.4% |
| 1uyvB02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.57 | 44.0 | 3.19e-01 | 82.7% | 83.5% |
| 3fhlA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 46.0 | 4.14e-01 | 87.8% | 97.1% |
| 5k9xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 45.0 | 3.39e-01 | 88.8% | 94.6% |
| 3om0A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 46.0 | 3.74e-01 | 94.9% | 92.3% |
| 1bagA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 46.0 | 3.16e-01 | 89.8% | 98.0% |
| 1vsrA00 | 3.40.960.10 | Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease | 0.55 | 41.0 | 3.76e-01 | 79.6% | 88.1% |
| 2qbyA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 38.0 | 3.26e-01 | 73.5% | 89.6% |
| 4gxwB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.55 | 42.0 | 2.92e-01 | 83.7% | 84.9% |
| 4xcvA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 39.0 | 3.26e-01 | 76.5% | 94.1% |
| 8ffuA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 47.0 | 3.59e-01 | 96.9% | 65.0% |
| 5a6sA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 38.0 | 3.12e-01 | 74.5% | 95.4% |
| 4m2mA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 46.0 | 3.66e-01 | 98.0% | 70.8% |
| 2o1sA02 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.53 | 41.0 | 3.54e-01 | 86.7% | 95.5% |
| 6ckmA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 39.0 | 3.05e-01 | 76.5% | 97.8% |
| 6jp6D01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 41.0 | 3.28e-01 | 85.7% | 75.0% |
| 4wd1A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.53 | 46.0 | 3.10e-01 | 99.0% | 87.8% |
| 4lgcA00 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.53 | 40.0 | 2.81e-01 | 95.9% | 21.4% |
| 1i4nA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 38.0 | 2.96e-01 | 80.6% | 93.2% |
| 5u25A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 37.0 | 3.52e-01 | 76.5% | 95.1% |
| 4mouA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.51 | 41.0 | 3.33e-01 | 90.8% | 95.6% |
| 2c0hA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 40.0 | 2.82e-01 | 88.8% | 98.3% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3396465 | 3939.1.1.250 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › Exostosin_GT47 | 0.63 | 50.0 | 4.04e-01 | 86.7% | 77.9% |
| 4984723 | 7512.1.1.32 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 | 0.62 | 50.0 | 4.17e-01 | 87.8% | 84.6% |
| 5014268 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.61 | 48.0 | 4.60e-01 | 86.7% | 93.9% |
| 3299686 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.61 | 49.0 | 4.33e-01 | 87.8% | 98.6% |
| 3381421 | 7574.1.1.8 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transket_pyr | 0.59 | 44.0 | 3.51e-01 | 78.6% | 71.2% |
| 4385993 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.57 | 42.0 | 3.80e-01 | 77.6% | 95.7% |
| 4378150 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.56 | 44.0 | 3.11e-01 | 88.8% | 95.8% |
| 3785963 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.54 | 42.0 | 3.23e-01 | 85.7% | 75.0% |
| 4556948 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.53 | 44.0 | 3.36e-01 | 93.9% | 74.8% |
| 5059636 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.53 | 43.0 | 3.62e-01 | 91.8% | 68.3% |
| 4120005 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.53 | 44.0 | 3.32e-01 | 91.8% | 89.6% |
| 4075097 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.52 | 41.0 | 3.37e-01 | 85.7% | 78.8% |
| 4934902 | 2007.1.4.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase | 0.52 | 35.0 | 3.95e-01 | 88.8% | 92.0% |
| 3515561 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.52 | 40.0 | 4.07e-01 | 89.8% | 85.3% |
| 4977857 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 36.0 | 2.83e-01 | 74.5% | 59.2% |
| 4018886 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.52 | 44.0 | 3.13e-01 | 98.0% | 80.9% |
D2
high
residues 65-126_179-220
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6t0bf00 | 1.25.40.40 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI | 0.53 | 38.0 | 3.85e-01 | 74.0% | 95.1% |
| 7smgD00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.53 | 39.0 | 3.60e-01 | 78.8% | 76.1% |